| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is 76819003
Identifier: 76819003
GI number: 76819003
Start: 2046587
End: 2049454
Strand: Direct
Name: 76819003
Synonym: BURPS1710b_A1678
Alternate gene names: NA
Gene position: 2046587-2049454 (Clockwise)
Preceding gene: 76819462
Following gene: 76818400
Centisome position: 64.32
GC content: 68.69
Gene sequence:
>2868_bases ATGGCCGTCGCTTGCGCGCTCACAGCTTGTGGAGGGGATGACGGCGGTCCCGCCGTGGCGGCGTCCTCGTTCGCCGCGGC GGGCGCGAACGGCGCCACGGCCGGCGTGGCCGACACGGCGCAAGCGGACGGCGCGCCGCGCACCGGCTCGCTGACGCAAT ATGTCGATCCGCTGATCGGCACGCTCGCGAGCAATTCGCCGAACCCGGTGCCGGCCGGGCAGGCGGGCAGCGTGGTGCCG GCCGCGGGTCTGCCGTCGGGCATGATCCAGTGGGCGCCCGACACGAACACGACTCCCGCGCCCGCCGACAGCAAGGAGCC CGGCTCCCCCGCCGGCTACTACTACGATCTGAACGCGATTCAGGGCTTCAGCGTCACGCACATGAGCGGCGCGGGCTGCG CCGGCAACAACGGCGAATTTCCGGTGATGCCGACCACCGACGCGACGAAGCTCGCGCCGACCTTCAGCCATGCGAATGAA ACGGCGAAGCCCGGCTATTACTCGGTGCTGCTCGACTCGCAGATCAAGGTCGAGCTGACGGCGACGCTGCGCACCGGCTT CGGCCGCTTCGCGTATCCGGCCGGCAAGCCCGCGCTGCTCGTGATCGACGCGACGCGCACGAACACGAAGACGTCGACGA GCGGCGCGATCACGCGCGTATCGGCGAACGCGATTTCCGGCAGCACGGTGGGCGGCGGCTTCTGCGGCAATTCGGTGCCG GTGCCCGTGTATTTCTACGCGACGTTCGATCGGCCGTTCGCACCGGCTTCGTCGATCTCGCGCGGCATCGCGAAGCTCGC GTTCGACTCGGGCGCGACCGTGCGGATGAAGATCGGGATTTCGTACGTGAGCGTCGATAACGCGAAGGCGAATCTCGACG CGGAAAACCGCACGTGGGACTTCGACGGCGTGCGCGCGCTCGCCGACGCGGCTTGGAACGACCGGCTCGGCGCGATCCGC GTGTCGAGCAGCGATGCCGACGCGCTGAAGAAGTTCTATACCGCGTTCTATCACGCCCTGTGGGCGCCGAGCGTGTTCAG CGACGTCAACGGCCAGTACATCGGCTTCGACAAGCAGGTGCACACGGTCGCGAAAGGCCAGGCCGCCCAGTATTCGAGCT TCTCGGGCTGGGATGTCTACCGTTCGCTGATCCAGCTGAAAGCGGTGCTGTTCCCGCGCGAGACGAGCGACATGATCCAG TCGCTCGTCAACGACGCGGACCAATGCGGCGCGATTCCACACTGGGTGAACGACAACGTCGAGGATGGCGTGATGCCGGG CGACGCCGGTTCGCTGATGGTGTCGAGCGCATACGCGTTCGGCGCGCGCGAGTTCGACGCGCGCGGCGCGCTCGCGCACA TGATCAGGATGGCGAATATTCCCGGCACCGCGTGCGCGGGCGTGACGACCAACGGCGGACGCGCGAGCTATCTGCAGACG GGCTACATCACGAGCGGAGAATGGGGAATCGCGTCGTCGACGCTCGAATACACGAGCAGCGATTTCGCGATCTCGCGCTT CGCGCTCGCGCTCGGCGACACCGCGACGCAGAAGATGCTGCTCGGGCGCTCGGCATACTGGCAGAACCTGCTGAACGCAT CGCTGAATCCGCCGCTGATCGCCGCGCGCCAGTCGAACGGCGCATGGATCGCCGAGACGCCGGGCAGCACCGACAACTAC GTCGAGGGCAACGCCGAGCAATACACGTGGATGGTGCCGTACGATCCCGCCGGCCTGTTCACGCAGCTTGGCGGCAATCA GGCGGTCGTGCCGCGGCTCGACAAGTTCTTCACGGTGCTGAACGCGGGGATGAGCCTGCCGAATTTCTACATGGGCAACG AGCCGACCTTCGAGGTGCCGTGGCTGTACAACTGGGCGGGCTCGCCGTCCGGCACGCAGCGCGTCGTCCGGCAGATCATG CAGACCGCGTTCAGCACGAAGCCCGACGGGCTGCCCGGCAACGACGATCTCGGCGCGGTGTCCGGCTGGTACGTATGGGC CGCGCTCGGGCTGTATCCGCAGGTTCCGGGCGTCGCGGGCTTCGCGATCGGCAGTCCGCAATTCGATGCGATCGATGTGC GGCTCGGCAGCGGCAGGATGCTGAAGATCCGCGCGCCGGGCGCGCCCGCATCGGGCTACGTGCAGAGCGTCGCCGTGAAC GGCCGCGCGCAGGCGAGCCCGTGGATCGCGCTCGATGCGCTCGACGGCGGCGCGGTGATGCACTTCAAGATGGGCGGCGC GCCGTCGCAATGGGGCGCGGGCGAGGCGCCGCCGTCGTTCGGCGTGCCGGTCGCGCGCGATGTGGCGGACAGCTTCAACA ATCGCGGCATCAGCGCGGACGGCGCGACGAACGCCGACGGCCAGGGCGCCGATTTCGACGGCAGCCTGTTCAGCTACTCG GCGAACGCGCTCGCGCAGGCGGGCGTGCGGCCCGGCGCGCCGTTCACGTACGGCGGCGCGAGCTTCGTGCTCGGCGGCGC GTCGTCGCTCGACAATGCGGTGGCGGTCGGGCAGACCGTGATGCTGCCGCCGGGCTCGGCGGGCACGAGTGTCGTCGTGC TCGGCGCGTCGAACAACGGGCCCAGCGCGGGCGTCGCGCGCGTGAGCTTCGCGGACGGGACGAGCGCGCAGGTCACGCTG TCGTTCGACGATTGGACGCTGAACGGCGGCAGCACGGGCGCGACATCGGCGATCGCGGTGACGAGCGCCTACCGCAATGC CGGCAACGGCCAGAAAGACAACGTGAAAACCTACATCTTCGCGCAGAAGATTCCGGTGCCGGCCGGCAAGGTCGTGACGA GCGTCACGCTGCCGAGGCAGGTAAGCGCCGGCAAGATGCACGTGTTCGGCATCGGCGTCGCGGCCTGA
Upstream 100 bases:
>100_bases TTCACGATTGGCCGTCGACGCGCCGTCGACCGTGCCGCTCGCATGCGAAGCACAAGAACCGGAGACAATCATGAATCGAT TCGTCAGGCTGGGCGCCGCG
Downstream 100 bases:
>100_bases CGGCTGCACGGGCGTTCGTGCTTCGACATGGCGCTCGCGCAGCCGGGTTGCAGACCGGGCGTTGCCTAAAGGCGGGGCGT GCCGCCGCGCATCGTTTCGC
Product: alpha-1,2-mannosidase family protein
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Secreted Protein; Glycoside Hydrolase Family Protein; Sugar Hydrolase; Outer Membrane Protein; Exported Alpha-1 2-Mannosidase; Alpha-1 2-Mannosidase Protein; Immunoreactive; Antigen; Lipoprotein
Number of amino acids: Translated: 955; Mature: 954
Protein sequence:
>955_residues MAVACALTACGGDDGGPAVAASSFAAAGANGATAGVADTAQADGAPRTGSLTQYVDPLIGTLASNSPNPVPAGQAGSVVP AAGLPSGMIQWAPDTNTTPAPADSKEPGSPAGYYYDLNAIQGFSVTHMSGAGCAGNNGEFPVMPTTDATKLAPTFSHANE TAKPGYYSVLLDSQIKVELTATLRTGFGRFAYPAGKPALLVIDATRTNTKTSTSGAITRVSANAISGSTVGGGFCGNSVP VPVYFYATFDRPFAPASSISRGIAKLAFDSGATVRMKIGISYVSVDNAKANLDAENRTWDFDGVRALADAAWNDRLGAIR VSSSDADALKKFYTAFYHALWAPSVFSDVNGQYIGFDKQVHTVAKGQAAQYSSFSGWDVYRSLIQLKAVLFPRETSDMIQ SLVNDADQCGAIPHWVNDNVEDGVMPGDAGSLMVSSAYAFGAREFDARGALAHMIRMANIPGTACAGVTTNGGRASYLQT GYITSGEWGIASSTLEYTSSDFAISRFALALGDTATQKMLLGRSAYWQNLLNASLNPPLIAARQSNGAWIAETPGSTDNY VEGNAEQYTWMVPYDPAGLFTQLGGNQAVVPRLDKFFTVLNAGMSLPNFYMGNEPTFEVPWLYNWAGSPSGTQRVVRQIM QTAFSTKPDGLPGNDDLGAVSGWYVWAALGLYPQVPGVAGFAIGSPQFDAIDVRLGSGRMLKIRAPGAPASGYVQSVAVN GRAQASPWIALDALDGGAVMHFKMGGAPSQWGAGEAPPSFGVPVARDVADSFNNRGISADGATNADGQGADFDGSLFSYS ANALAQAGVRPGAPFTYGGASFVLGGASSLDNAVAVGQTVMLPPGSAGTSVVVLGASNNGPSAGVARVSFADGTSAQVTL SFDDWTLNGGSTGATSAIAVTSAYRNAGNGQKDNVKTYIFAQKIPVPAGKVVTSVTLPRQVSAGKMHVFGIGVAA
Sequences:
>Translated_955_residues MAVACALTACGGDDGGPAVAASSFAAAGANGATAGVADTAQADGAPRTGSLTQYVDPLIGTLASNSPNPVPAGQAGSVVP AAGLPSGMIQWAPDTNTTPAPADSKEPGSPAGYYYDLNAIQGFSVTHMSGAGCAGNNGEFPVMPTTDATKLAPTFSHANE TAKPGYYSVLLDSQIKVELTATLRTGFGRFAYPAGKPALLVIDATRTNTKTSTSGAITRVSANAISGSTVGGGFCGNSVP VPVYFYATFDRPFAPASSISRGIAKLAFDSGATVRMKIGISYVSVDNAKANLDAENRTWDFDGVRALADAAWNDRLGAIR VSSSDADALKKFYTAFYHALWAPSVFSDVNGQYIGFDKQVHTVAKGQAAQYSSFSGWDVYRSLIQLKAVLFPRETSDMIQ SLVNDADQCGAIPHWVNDNVEDGVMPGDAGSLMVSSAYAFGAREFDARGALAHMIRMANIPGTACAGVTTNGGRASYLQT GYITSGEWGIASSTLEYTSSDFAISRFALALGDTATQKMLLGRSAYWQNLLNASLNPPLIAARQSNGAWIAETPGSTDNY VEGNAEQYTWMVPYDPAGLFTQLGGNQAVVPRLDKFFTVLNAGMSLPNFYMGNEPTFEVPWLYNWAGSPSGTQRVVRQIM QTAFSTKPDGLPGNDDLGAVSGWYVWAALGLYPQVPGVAGFAIGSPQFDAIDVRLGSGRMLKIRAPGAPASGYVQSVAVN GRAQASPWIALDALDGGAVMHFKMGGAPSQWGAGEAPPSFGVPVARDVADSFNNRGISADGATNADGQGADFDGSLFSYS ANALAQAGVRPGAPFTYGGASFVLGGASSLDNAVAVGQTVMLPPGSAGTSVVVLGASNNGPSAGVARVSFADGTSAQVTL SFDDWTLNGGSTGATSAIAVTSAYRNAGNGQKDNVKTYIFAQKIPVPAGKVVTSVTLPRQVSAGKMHVFGIGVAA >Mature_954_residues AVACALTACGGDDGGPAVAASSFAAAGANGATAGVADTAQADGAPRTGSLTQYVDPLIGTLASNSPNPVPAGQAGSVVPA AGLPSGMIQWAPDTNTTPAPADSKEPGSPAGYYYDLNAIQGFSVTHMSGAGCAGNNGEFPVMPTTDATKLAPTFSHANET AKPGYYSVLLDSQIKVELTATLRTGFGRFAYPAGKPALLVIDATRTNTKTSTSGAITRVSANAISGSTVGGGFCGNSVPV PVYFYATFDRPFAPASSISRGIAKLAFDSGATVRMKIGISYVSVDNAKANLDAENRTWDFDGVRALADAAWNDRLGAIRV SSSDADALKKFYTAFYHALWAPSVFSDVNGQYIGFDKQVHTVAKGQAAQYSSFSGWDVYRSLIQLKAVLFPRETSDMIQS LVNDADQCGAIPHWVNDNVEDGVMPGDAGSLMVSSAYAFGAREFDARGALAHMIRMANIPGTACAGVTTNGGRASYLQTG YITSGEWGIASSTLEYTSSDFAISRFALALGDTATQKMLLGRSAYWQNLLNASLNPPLIAARQSNGAWIAETPGSTDNYV EGNAEQYTWMVPYDPAGLFTQLGGNQAVVPRLDKFFTVLNAGMSLPNFYMGNEPTFEVPWLYNWAGSPSGTQRVVRQIMQ TAFSTKPDGLPGNDDLGAVSGWYVWAALGLYPQVPGVAGFAIGSPQFDAIDVRLGSGRMLKIRAPGAPASGYVQSVAVNG RAQASPWIALDALDGGAVMHFKMGGAPSQWGAGEAPPSFGVPVARDVADSFNNRGISADGATNADGQGADFDGSLFSYSA NALAQAGVRPGAPFTYGGASFVLGGASSLDNAVAVGQTVMLPPGSAGTSVVVLGASNNGPSAGVARVSFADGTSAQVTLS FDDWTLNGGSTGATSAIAVTSAYRNAGNGQKDNVKTYIFAQKIPVPAGKVVTSVTLPRQVSAGKMHVFGIGVAA
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 98382; Mature: 98251
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVACALTACGGDDGGPAVAASSFAAAGANGATAGVADTAQADGAPRTGSLTQYVDPLIG CCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHH TLASNSPNPVPAGQAGSVVPAAGLPSGMIQWAPDTNTTPAPADSKEPGSPAGYYYDLNAI HHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCC QGFSVTHMSGAGCAGNNGEFPVMPTTDATKLAPTFSHANETAKPGYYSVLLDSQIKVELT CCCEEEECCCCCCCCCCCCCCEECCCCCHHCCCCHHCCCCCCCCCEEEEEECCEEEEEEE ATLRTGFGRFAYPAGKPALLVIDATRTNTKTSTSGAITRVSANAISGSTVGGGFCGNSVP EEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC VPVYFYATFDRPFAPASSISRGIAKLAFDSGATVRMKIGISYVSVDNAKANLDAENRTWD EEEEEEEECCCCCCCHHHHHHHHHHHEECCCCEEEEEEEEEEEEECCCCCCCCCCCCEEC FDGVRALADAAWNDRLGAIRVSSSDADALKKFYTAFYHALWAPSVFSDVNGQYIGFDKQV CHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCEEECCHHH HTVAKGQAAQYSSFSGWDVYRSLIQLKAVLFPRETSDMIQSLVNDADQCGAIPHWVNDNV HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHCCCCCCCCCCC EDGVMPGDAGSLMVSSAYAFGAREFDARGALAHMIRMANIPGTACAGVTTNGGRASYLQT CCCCCCCCCCCEEEEHHHHCCCCCCCHHHHHHHHHHHCCCCCCEECCEECCCCCEEEEEE GYITSGEWGIASSTLEYTSSDFAISRFALALGDTATQKMLLGRSAYWQNLLNASLNPPLI CCEECCCCCCCCCCHHHCCCCHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHCCCCCCCEE AARQSNGAWIAETPGSTDNYVEGNAEQYTWMVPYDPAGLFTQLGGNQAVVPRLDKFFTVL EEECCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCEEEHHHHHHHHHHH NAGMSLPNFYMGNEPTFEVPWLYNWAGSPSGTQRVVRQIMQTAFSTKPDGLPGNDDLGAV HCCCCCCCCCCCCCCCEECCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC SGWYVWAALGLYPQVPGVAGFAIGSPQFDAIDVRLGSGRMLKIRAPGAPASGYVQSVAVN HHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEEECCCCEEEEECCCCCCCCCEEEEEEC GRAQASPWIALDALDGGAVMHFKMGGAPSQWGAGEAPPSFGVPVARDVADSFNNRGISAD CCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC GATNADGQGADFDGSLFSYSANALAQAGVRPGAPFTYGGASFVLGGASSLDNAVAVGQTV CCCCCCCCCCCCCCCCEEECHHHHHHCCCCCCCCEEECCCEEEECCCCCCCCHHHCCCEE MLPPGSAGTSVVVLGASNNGPSAGVARVSFADGTSAQVTLSFDDWTLNGGSTGATSAIAV EECCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCEEEEEEECCEEECCCCCCCCCEEEE TSAYRNAGNGQKDNVKTYIFAQKIPVPAGKVVTSVTLPRQVSAGKMHVFGIGVAA EHHHHCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEEEECC >Mature Secondary Structure AVACALTACGGDDGGPAVAASSFAAAGANGATAGVADTAQADGAPRTGSLTQYVDPLIG CEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHH TLASNSPNPVPAGQAGSVVPAAGLPSGMIQWAPDTNTTPAPADSKEPGSPAGYYYDLNAI HHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCC QGFSVTHMSGAGCAGNNGEFPVMPTTDATKLAPTFSHANETAKPGYYSVLLDSQIKVELT CCCEEEECCCCCCCCCCCCCCEECCCCCHHCCCCHHCCCCCCCCCEEEEEECCEEEEEEE ATLRTGFGRFAYPAGKPALLVIDATRTNTKTSTSGAITRVSANAISGSTVGGGFCGNSVP EEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC VPVYFYATFDRPFAPASSISRGIAKLAFDSGATVRMKIGISYVSVDNAKANLDAENRTWD EEEEEEEECCCCCCCHHHHHHHHHHHEECCCCEEEEEEEEEEEEECCCCCCCCCCCCEEC FDGVRALADAAWNDRLGAIRVSSSDADALKKFYTAFYHALWAPSVFSDVNGQYIGFDKQV CHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCEEECCHHH HTVAKGQAAQYSSFSGWDVYRSLIQLKAVLFPRETSDMIQSLVNDADQCGAIPHWVNDNV HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHCCCCCCCCCCC EDGVMPGDAGSLMVSSAYAFGAREFDARGALAHMIRMANIPGTACAGVTTNGGRASYLQT CCCCCCCCCCCEEEEHHHHCCCCCCCHHHHHHHHHHHCCCCCCEECCEECCCCCEEEEEE GYITSGEWGIASSTLEYTSSDFAISRFALALGDTATQKMLLGRSAYWQNLLNASLNPPLI CCEECCCCCCCCCCHHHCCCCHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHCCCCCCCEE AARQSNGAWIAETPGSTDNYVEGNAEQYTWMVPYDPAGLFTQLGGNQAVVPRLDKFFTVL EEECCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCEEEHHHHHHHHHHH NAGMSLPNFYMGNEPTFEVPWLYNWAGSPSGTQRVVRQIMQTAFSTKPDGLPGNDDLGAV HCCCCCCCCCCCCCCCEECCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC SGWYVWAALGLYPQVPGVAGFAIGSPQFDAIDVRLGSGRMLKIRAPGAPASGYVQSVAVN HHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEEECCCCEEEEECCCCCCCCCEEEEEEC GRAQASPWIALDALDGGAVMHFKMGGAPSQWGAGEAPPSFGVPVARDVADSFNNRGISAD CCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC GATNADGQGADFDGSLFSYSANALAQAGVRPGAPFTYGGASFVLGGASSLDNAVAVGQTV CCCCCCCCCCCCCCCCEEECHHHHHHCCCCCCCCEEECCCEEEECCCCCCCCHHHCCCEE MLPPGSAGTSVVVLGASNNGPSAGVARVSFADGTSAQVTLSFDDWTLNGGSTGATSAIAV EECCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCEEEEEEECCEEECCCCCCCCCEEEE TSAYRNAGNGQKDNVKTYIFAQKIPVPAGKVVTSVTLPRQVSAGKMHVFGIGVAA EHHHHCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA