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The map label for this gene is ygdH [C]

Identifier: 76818869

GI number: 76818869

Start: 1285481

End: 1286428

Strand: Direct

Name: ygdH [C]

Synonym: BURPS1710b_A1022

Alternate gene names: 76818869

Gene position: 1285481-1286428 (Clockwise)

Preceding gene: 76817718

Following gene: 76819103

Centisome position: 40.4

GC content: 70.99

Gene sequence:

>948_bases
ATGAACCCACCGCCCCCACCACGCGCCAAGCGCCGCCGAACGCGCACCGCGTCCGCGCCCGCGCCCGGAATGCGCCCGAC
GCCGCGCCGCACGCGCACCGCGCCGAAGCGCCGCGCGCCACTGTCGAGCACCGTCGAGCGGCTCGTATCGAGCCCGACGT
ATCGGCAGGCCGACGAGGATCTCGCGTTCCTGCAGCGCCCCGAAATGTGCGGCGTGCGCTTGCAGCTCGACTACTGGAAG
ACCGAGGAAACGCTGCAACGCTTCGGCATCTGCGATACGGTGGTGGTCTACGGCAGCACGCGGATCGCGTCGCCCGCCGT
CGCGCGCGCGAGGCTCGCCGACGCGCAGCACCGGCTCGCCGAGCGTCCGAACGACCCCGAGCGCCGCCATGCGGTCAGCG
TCGCGGTGCGGCTGCTCGAGCGCAGCCACTACTACGGCGTCGCGCGCGATCTCGGCCGGCTCGTCGGCGAAACCGGCCGC
TCGCCGCATCCTCGGCGCCTCACGATCATCACGGGCGGCGGTCCGGGCATCATGGAGGCGGCCAATCGCGGCGCGCACGA
GCGGGGCGCGCCGAGCATCGGGCTCAACATCACGCTGCCGCGCGAGCAATTCCCGAATCCCTACGTGACGCCCGAGCTGT
GTTTTCGCTTCCATTACTTCGCGATCCGCAAGCTGCACCTGCTCGAACGCGCGAAGGCCGCGGTGTTCTTTCCCGGCGGC
TACGGCACCTGCGACGAGCTGTTCGAAGTGCTGACGCTGTTGCAGACCCGCAAGATCGCGCCGCTGCCCGTCGTGCTCGT
CGGCCGCGCGTTCTGGCGCTCGGCGGTCGATTTCGGGTTTCTCGTCGACGAAGGCATGATCGACCCGTGCGACGCAGCGC
TGTTCCGGTTCTGCGAAACCGCCGACGAGATCTGGGCCGCGATCGGCGGCCCGCACGGGCCGGCCTAG

Upstream 100 bases:

>100_bases
TCACATCCGCTTTGTCGGCCGACGTTGACCGCGATCAAGCGGCGCACAACGATCCGGCTTAACGTGGGTGTCGACTCGAT
CCTCCGTACCGGAGCGCGCG

Downstream 100 bases:

>100_bases
CGGCGCGCGGCCCGGCCAATCGGTCGGCCGCCAGGCGAAGCGGCGGGGAGCGGCCCGGAGCACCGCGGCCCGTCGCCATC
CGACCCGGCGCGACCCGGCG

Product: decarboxylase family protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MNPPPPPRAKRRRTRTASAPAPGMRPTPRRTRTAPKRRAPLSSTVERLVSSPTYRQADEDLAFLQRPEMCGVRLQLDYWK
TEETLQRFGICDTVVVYGSTRIASPAVARARLADAQHRLAERPNDPERRHAVSVAVRLLERSHYYGVARDLGRLVGETGR
SPHPRRLTIITGGGPGIMEAANRGAHERGAPSIGLNITLPREQFPNPYVTPELCFRFHYFAIRKLHLLERAKAAVFFPGG
YGTCDELFEVLTLLQTRKIAPLPVVLVGRAFWRSAVDFGFLVDEGMIDPCDAALFRFCETADEIWAAIGGPHGPA

Sequences:

>Translated_315_residues
MNPPPPPRAKRRRTRTASAPAPGMRPTPRRTRTAPKRRAPLSSTVERLVSSPTYRQADEDLAFLQRPEMCGVRLQLDYWK
TEETLQRFGICDTVVVYGSTRIASPAVARARLADAQHRLAERPNDPERRHAVSVAVRLLERSHYYGVARDLGRLVGETGR
SPHPRRLTIITGGGPGIMEAANRGAHERGAPSIGLNITLPREQFPNPYVTPELCFRFHYFAIRKLHLLERAKAAVFFPGG
YGTCDELFEVLTLLQTRKIAPLPVVLVGRAFWRSAVDFGFLVDEGMIDPCDAALFRFCETADEIWAAIGGPHGPA
>Mature_315_residues
MNPPPPPRAKRRRTRTASAPAPGMRPTPRRTRTAPKRRAPLSSTVERLVSSPTYRQADEDLAFLQRPEMCGVRLQLDYWK
TEETLQRFGICDTVVVYGSTRIASPAVARARLADAQHRLAERPNDPERRHAVSVAVRLLERSHYYGVARDLGRLVGETGR
SPHPRRLTIITGGGPGIMEAANRGAHERGAPSIGLNITLPREQFPNPYVTPELCFRFHYFAIRKLHLLERAKAAVFFPGG
YGTCDELFEVLTLLQTRKIAPLPVVLVGRAFWRSAVDFGFLVDEGMIDPCDAALFRFCETADEIWAAIGGPHGPA

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35095; Mature: 35095

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPPPPPRAKRRRTRTASAPAPGMRPTPRRTRTAPKRRAPLSSTVERLVSSPTYRQADED
CCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHCCCCHHCCCHHHHHHHHHCCCCCCCCHHH
LAFLQRPEMCGVRLQLDYWKTEETLQRFGICDTVVVYGSTRIASPAVARARLADAQHRLA
HHHHCCCCCCCEEEEEECCCCHHHHHHHCCHHHEEEECCCHHCCHHHHHHHHHHHHHHHH
ERPNDPERRHAVSVAVRLLERSHYYGVARDLGRLVGETGRSPHPRRLTIITGGGPGIMEA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHH
ANRGAHERGAPSIGLNITLPREQFPNPYVTPELCFRFHYFAIRKLHLLERAKAAVFFPGG
HHCCCCCCCCCCCCEEEEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCC
YGTCDELFEVLTLLQTRKIAPLPVVLVGRAFWRSAVDFGFLVDEGMIDPCDAALFRFCET
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
ADEIWAAIGGPHGPA
HHHHHHHHCCCCCCC
>Mature Secondary Structure
MNPPPPPRAKRRRTRTASAPAPGMRPTPRRTRTAPKRRAPLSSTVERLVSSPTYRQADED
CCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHCCCCHHCCCHHHHHHHHHCCCCCCCCHHH
LAFLQRPEMCGVRLQLDYWKTEETLQRFGICDTVVVYGSTRIASPAVARARLADAQHRLA
HHHHCCCCCCCEEEEEECCCCHHHHHHHCCHHHEEEECCCHHCCHHHHHHHHHHHHHHHH
ERPNDPERRHAVSVAVRLLERSHYYGVARDLGRLVGETGRSPHPRRLTIITGGGPGIMEA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHH
ANRGAHERGAPSIGLNITLPREQFPNPYVTPELCFRFHYFAIRKLHLLERAKAAVFFPGG
HHCCCCCCCCCCCCEEEEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCC
YGTCDELFEVLTLLQTRKIAPLPVVLVGRAFWRSAVDFGFLVDEGMIDPCDAALFRFCET
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
ADEIWAAIGGPHGPA
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA