| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is 76818820
Identifier: 76818820
GI number: 76818820
Start: 2044286
End: 2046334
Strand: Direct
Name: 76818820
Synonym: BURPS1710b_A1676
Alternate gene names: NA
Gene position: 2044286-2046334 (Clockwise)
Preceding gene: 76819422
Following gene: 76819462
Centisome position: 64.25
GC content: 65.4
Gene sequence:
>2049_bases ATGATTCGTTCGTCGTACTCACCTATGTCATACCCGGCGACTCATACTGTCGACGGGGCAGATCGGGAGAGCATCACTCA TGGTCAGGAAACGAATCCGTGCCGTGTTCGCCGCCGCGCTCGTGGGGCTGGCCGCGCACGCGGCGCACGCGCAATACACG ACGGACTGGATCGCGAACACTTACGGGACCATCGCGTCGCACGTCGGCAACAACGCGCGATCGATGTGGGTCTCGCCCGA AGGCGTGATCTATACGGCATCCTTCTGGGACGAAAACGCCGGCGGCGTCGCGATCTATCAGAACGGCAAGACCCTCGGCT CGATCGGCACGCACGCCGAATTCCAGGGTGGCGCGATCACCGGCAACGCGACGTCGATCTTCGCGGCGATGCAGTACAGC ACCCCGCAGGGCAGCGGCACGGTCGGCCGCTACAACCGCGCGACGCTGCAGCGCGATCTCACGATCCCGGTCAGCGTGTG GAACGCGGTCAGCCGAGCCGACGTGATCACCGGCCTCGCGACCGCGGGCACGCTGCTGTACGCGAGCGACTACTTCGGCA ACCGCGTGCGCGTGTTCACCACCGACGGCGTCTGGCAGCGCGACATCGGCATCGCGAACCCCGGCGCGCTCGCGCTCGAC GATGCCGGCAATCTGTGGGTCGCGCAGAAGAATGCGGCGAAGATCGTCGAATTCGGCCCCACCGGCGCGCTGATGAACAC GATCCAGATGGCGAGCGCGTCGCGGCCGGCTTCGCTGTACTTCGATGCGTCGAAGCGGCAACTGATGATCGGCGATCAAG GGCCCGACATGAACATCAAGCTCTACGCGATCGCGGGCATGCCGAAGCAGGTCGGCACGTTCGGCGTGCAGGGCGGCTAT CTCGACACGACGACGGGCATCAGGGGCCAAGTCGGCGACCGGCGCTTCACGCGCGTGGTCGGCATCGGCAAGGATGCCGC CGGCACGCTGTACGTGCTCAACAATCCGTGGGGCGGCGGCTGGGACCTCGGGCGCAACGGCGCGACCGACATTCACGCGT ACGACGCGCTCGGCAACGCGCTGTGGAAGCTGCAGGCGCTGAACTTCGAGGCGATCGCCGCGCCGGACCCGACGACCGAC GGCGCGCTGTTCTACAGCGGCATGAACGTCTATTCCGGCACCGCGGGCGGCACCTTCGTCGCGAACACGGTCGATCCGTT CACGTACCCGTCCGATCCACGTCTCGACATGAACGATTATCAGCGCGGCCAGCATTTCGGCCAGCTCGTGAGCGTCGGCG GCCACAAGATTCTCGTCGCGTCGGGGCAGAATCCGGGCAACTTCAATTTCTATCACTTCAACGCGGCGAGCGGCTACATC GCGATTCCCGATGCGTCGCTGCCGGGCAAGGGGTTCAACACATCGCTGCAGGTGACGGCCGGCTTTTCGATCGACAACAA GGGCGACGTGTGGGCGGGCCTCAATGGAACGAACGCGATCTCGCACTATCCGCTCGCGGGAATCGATGCGAGCGGCAAGC CATCATGGGGCGCGCCCACCTCGATCCCGACGCCGGCGAGCGTCCAGCCGACCACGCGCATTCTCTACCTGTCGGACAGC GATACGATGATCCTCGCGCAGGGCATCGCGGGAAGCTGGGACTGGACCGCGATGAACGGCCGGATCGAGGTGTATCACGG CTGGAGCGCGGGCAACGTCACGCAGCCGAACCCGGTGATCGCGCTCACGAGCCCCAATCCGAAATCGATCGCGTCGGCCG GCAACTATCTGTTCGTCGGGTACGTGCATACGGTGCCGAACATCGACGTGTTCGATCTCAACACGGGCCAGCTCGTCGCC ACGCTGACCAATTCGAACACGGGCATGATGGACGTGGGCAACGACGTCGATTCGATGTACGGCCTGAGGGCGTATCTGCG CTCGACCGGCGAATACGTGATCACGAAGGACAACTACAACGGATCGAGCATCGTCGTCTATCGCTGGCGGCCGTGACGGC GGCGCGCGCGAGCGTGCGAAAACGGGCGGCGCCGGGGGGGCGCGCTTGA
Upstream 100 bases:
>100_bases GATTCGGCTGAACAACCCCGAACGCGGGACGCGGGATGGGGGACGCCCGGCAGACGCAACGCGGCGGCAGTGACGTGGCG ACCAATCAACGAGGGCGGCG
Downstream 100 bases:
>100_bases TGCGCACGCGGCGGCTCGCGGGTATTCGAGATAAACACGTCGCGTTGCATGCTGTTTCGTGTCGTTTAGTAAATCTGATA AAAACATTACAACGCCCTTC
Product: LigA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 682; Mature: 682
Protein sequence:
>682_residues MIRSSYSPMSYPATHTVDGADRESITHGQETNPCRVRRRARGAGRARGARAIHDGLDREHLRDHRVARRQQRAIDVGLAR RRDLYGILLGRKRRRRRDLSERQDPRLDRHARRIPGWRDHRQRDVDLRGDAVQHPAGQRHGRPLQPRDAAARSHDPGQRV ERGQPSRRDHRPRDRGHAAVRERLLRQPRARVHHRRRLAARHRHREPRRARARRCRQSVGRAEECGEDRRIRPHRRADEH DPDGERVAAGFAVLRCVEAATDDRRSRARHEHQALRDRGHAEAGRHVRRAGRLSRHDDGHQGPSRRPALHARGRHRQGCR RHAVRAQQSVGRRLGPRAQRRDRHSRVRRARQRAVEAAGAELRGDRRAGPDDRRRAVLQRHERLFRHRGRHLRREHGRSV HVPVRSTSRHERLSARPAFRPARERRRPQDSRRVGAESGQLQFLSLQRGERLHRDSRCVAAGQGVQHIAAGDGRLFDRQQ GRRVGGPQWNERDLALSARGNRCERQAIMGRAHLDPDAGERPADHAHSLPVGQRYDDPRAGHRGKLGLDRDERPDRGVSR LERGQRHAAEPGDRAHEPQSEIDRVGRQLSVRRVRAYGAEHRRVRSQHGPARRHADQFEHGHDGRGQRRRFDVRPEGVSA LDRRIRDHEGQLQRIEHRRLSLAAVTAARASVRKRAAPGGRA
Sequences:
>Translated_682_residues MIRSSYSPMSYPATHTVDGADRESITHGQETNPCRVRRRARGAGRARGARAIHDGLDREHLRDHRVARRQQRAIDVGLAR RRDLYGILLGRKRRRRRDLSERQDPRLDRHARRIPGWRDHRQRDVDLRGDAVQHPAGQRHGRPLQPRDAAARSHDPGQRV ERGQPSRRDHRPRDRGHAAVRERLLRQPRARVHHRRRLAARHRHREPRRARARRCRQSVGRAEECGEDRRIRPHRRADEH DPDGERVAAGFAVLRCVEAATDDRRSRARHEHQALRDRGHAEAGRHVRRAGRLSRHDDGHQGPSRRPALHARGRHRQGCR RHAVRAQQSVGRRLGPRAQRRDRHSRVRRARQRAVEAAGAELRGDRRAGPDDRRRAVLQRHERLFRHRGRHLRREHGRSV HVPVRSTSRHERLSARPAFRPARERRRPQDSRRVGAESGQLQFLSLQRGERLHRDSRCVAAGQGVQHIAAGDGRLFDRQQ GRRVGGPQWNERDLALSARGNRCERQAIMGRAHLDPDAGERPADHAHSLPVGQRYDDPRAGHRGKLGLDRDERPDRGVSR LERGQRHAAEPGDRAHEPQSEIDRVGRQLSVRRVRAYGAEHRRVRSQHGPARRHADQFEHGHDGRGQRRRFDVRPEGVSA LDRRIRDHEGQLQRIEHRRLSLAAVTAARASVRKRAAPGGRA >Mature_682_residues MIRSSYSPMSYPATHTVDGADRESITHGQETNPCRVRRRARGAGRARGARAIHDGLDREHLRDHRVARRQQRAIDVGLAR RRDLYGILLGRKRRRRRDLSERQDPRLDRHARRIPGWRDHRQRDVDLRGDAVQHPAGQRHGRPLQPRDAAARSHDPGQRV ERGQPSRRDHRPRDRGHAAVRERLLRQPRARVHHRRRLAARHRHREPRRARARRCRQSVGRAEECGEDRRIRPHRRADEH DPDGERVAAGFAVLRCVEAATDDRRSRARHEHQALRDRGHAEAGRHVRRAGRLSRHDDGHQGPSRRPALHARGRHRQGCR RHAVRAQQSVGRRLGPRAQRRDRHSRVRRARQRAVEAAGAELRGDRRAGPDDRRRAVLQRHERLFRHRGRHLRREHGRSV HVPVRSTSRHERLSARPAFRPARERRRPQDSRRVGAESGQLQFLSLQRGERLHRDSRCVAAGQGVQHIAAGDGRLFDRQQ GRRVGGPQWNERDLALSARGNRCERQAIMGRAHLDPDAGERPADHAHSLPVGQRYDDPRAGHRGKLGLDRDERPDRGVSR LERGQRHAAEPGDRAHEPQSEIDRVGRQLSVRRVRAYGAEHRRVRSQHGPARRHADQFEHGHDGRGQRRRFDVRPEGVSA LDRRIRDHEGQLQRIEHRRLSLAAVTAARASVRKRAAPGGRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78921; Mature: 78921
Theoretical pI: Translated: 12.37; Mature: 12.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRSSYSPMSYPATHTVDGADRESITHGQETNPCRVRRRARGAGRARGARAIHDGLDREH CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHH LRDHRVARRQQRAIDVGLARRRDLYGILLGRKRRRRRDLSERQDPRLDRHARRIPGWRDH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHCCCHHHH RQRDVDLRGDAVQHPAGQRHGRPLQPRDAAARSHDPGQRVERGQPSRRDHRPRDRGHAAV HCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHCCCCCHHHHHCCCCCCCCCCCCHHHHHHH RERLLRQPRARVHHRRRLAARHRHREPRRARARRCRQSVGRAEECGEDRRIRPHRRADEH HHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCC DPDGERVAAGFAVLRCVEAATDDRRSRARHEHQALRDRGHAEAGRHVRRAGRLSRHDDGH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC QGPSRRPALHARGRHRQGCRRHAVRAQQSVGRRLGPRAQRRDRHSRVRRARQRAVEAAGA CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH ELRGDRRAGPDDRRRAVLQRHERLFRHRGRHLRREHGRSVHVPVRSTSRHERLSARPAFR HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCCC PARERRRPQDSRRVGAESGQLQFLSLQRGERLHRDSRCVAAGQGVQHIAAGDGRLFDRQQ CHHHHCCCCHHHHCCCCCCCEEEEEHHHHHHHHHHCHHHHHCCCCHHHHCCCCCHHCHHC GRRVGGPQWNERDLALSARGNRCERQAIMGRAHLDPDAGERPADHAHSLPVGQRYDDPRA CCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCC GHRGKLGLDRDERPDRGVSRLERGQRHAAEPGDRAHEPQSEIDRVGRQLSVRRVRAYGAE CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HRRVRSQHGPARRHADQFEHGHDGRGQRRRFDVRPEGVSALDRRIRDHEGQLQRIEHRRL HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SLAAVTAARASVRKRAAPGGRA HHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIRSSYSPMSYPATHTVDGADRESITHGQETNPCRVRRRARGAGRARGARAIHDGLDREH CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHH LRDHRVARRQQRAIDVGLARRRDLYGILLGRKRRRRRDLSERQDPRLDRHARRIPGWRDH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHCCCHHHH RQRDVDLRGDAVQHPAGQRHGRPLQPRDAAARSHDPGQRVERGQPSRRDHRPRDRGHAAV HCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHCCCCCHHHHHCCCCCCCCCCCCHHHHHHH RERLLRQPRARVHHRRRLAARHRHREPRRARARRCRQSVGRAEECGEDRRIRPHRRADEH HHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCC DPDGERVAAGFAVLRCVEAATDDRRSRARHEHQALRDRGHAEAGRHVRRAGRLSRHDDGH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC QGPSRRPALHARGRHRQGCRRHAVRAQQSVGRRLGPRAQRRDRHSRVRRARQRAVEAAGA CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH ELRGDRRAGPDDRRRAVLQRHERLFRHRGRHLRREHGRSVHVPVRSTSRHERLSARPAFR HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCCC PARERRRPQDSRRVGAESGQLQFLSLQRGERLHRDSRCVAAGQGVQHIAAGDGRLFDRQQ CHHHHCCCCHHHHCCCCCCCEEEEEHHHHHHHHHHCHHHHHCCCCHHHHCCCCCHHCHHC GRRVGGPQWNERDLALSARGNRCERQAIMGRAHLDPDAGERPADHAHSLPVGQRYDDPRA CCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCC GHRGKLGLDRDERPDRGVSRLERGQRHAAEPGDRAHEPQSEIDRVGRQLSVRRVRAYGAE CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HRRVRSQHGPARRHADQFEHGHDGRGQRRRFDVRPEGVSALDRRIRDHEGQLQRIEHRRL HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SLAAVTAARASVRKRAAPGGRA HHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA