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The map label for this gene is yecD [H]

Identifier: 76818798

GI number: 76818798

Start: 1269932

End: 1270504

Strand: Direct

Name: yecD [H]

Synonym: BURPS1710b_A1005

Alternate gene names: 76818798

Gene position: 1269932-1270504 (Clockwise)

Preceding gene: 76819332

Following gene: 76817285

Centisome position: 39.91

GC content: 69.98

Gene sequence:

>573_bases
ATGAACACCGCATTGATCGGCCTCGACTACATCGTCGACATCATGCATCCCACCGGCAAGATCGCCCGCAGCGCCGCGCA
TGCCGCGCAGCGCGACGTGGTCGGCCGCTTCAACCGCGCGCTCGCGGCCGCGAAGCAGAAGGACTGGCTGCGGATCGGCG
TCAAGGTCGGCTTCGAGCCGGGCTATGCGGACTTGCCCGCGCATTCGCCGATGTTCGGCCGCGCGCAGGCATTCGGCGCG
CTCGATCTGAGCGGCGCCGGCACCGCGTTCCACCCGGATCTCGACGCCGCCGCCTTCCAGCTCGTGGTCGTCAAGCCGCG
CGTGAGCGCGTTCTATGCGACGCGTCTCGAAGCCGCGCTGCGTGCGCGTCGGATCGAACGCGTGATCGTCGCGGGCGTCA
GCACGGCGTGGGCCGTGCAGGCGGCGGCTCGCGACGCGCACGATCGCGACTACGAAGTGCTCGTGCTCGAGGACGCGTGC
GCGGCCGCGACGGAAGACGAGCATCAACGCTCGATCGACACGCTGCGCGGCATCGCGCGGATCGTCACGCTCGACGATCT
CGCGGCGCTGTGA

Upstream 100 bases:

>100_bases
GCGAGCTGCTCGCCGCCGCCGGCCCGCTGCTCGAGCGCCTCGCGCAATTCGACGAAGCGGCGGGCGCCGCGTCGCCCGCC
CCCTCACCCAGGAGCTCACG

Downstream 100 bases:

>100_bases
ACGCGGCCCGCGCGAGGCCCGCATGATCCGCGCGGCCCGCAGCGCGCTCGCCGCCCGCGCCGGCCGCGCATTCGATCTGC
CGACGCTCGGCCGCACGCTC

Product: isochorismatase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MNTALIGLDYIVDIMHPTGKIARSAAHAAQRDVVGRFNRALAAAKQKDWLRIGVKVGFEPGYADLPAHSPMFGRAQAFGA
LDLSGAGTAFHPDLDAAAFQLVVVKPRVSAFYATRLEAALRARRIERVIVAGVSTAWAVQAAARDAHDRDYEVLVLEDAC
AAATEDEHQRSIDTLRGIARIVTLDDLAAL

Sequences:

>Translated_190_residues
MNTALIGLDYIVDIMHPTGKIARSAAHAAQRDVVGRFNRALAAAKQKDWLRIGVKVGFEPGYADLPAHSPMFGRAQAFGA
LDLSGAGTAFHPDLDAAAFQLVVVKPRVSAFYATRLEAALRARRIERVIVAGVSTAWAVQAAARDAHDRDYEVLVLEDAC
AAATEDEHQRSIDTLRGIARIVTLDDLAAL
>Mature_190_residues
MNTALIGLDYIVDIMHPTGKIARSAAHAAQRDVVGRFNRALAAAKQKDWLRIGVKVGFEPGYADLPAHSPMFGRAQAFGA
LDLSGAGTAFHPDLDAAAFQLVVVKPRVSAFYATRLEAALRARRIERVIVAGVSTAWAVQAAARDAHDRDYEVLVLEDAC
AAATEDEHQRSIDTLRGIARIVTLDDLAAL

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

Organism=Escherichia coli, GI87081992, Length=99, Percent_Identity=34.3434343434343, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 20444; Mature: 20444

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTALIGLDYIVDIMHPTGKIARSAAHAAQRDVVGRFNRALAAAKQKDWLRIGVKVGFEP
CCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
GYADLPAHSPMFGRAQAFGALDLSGAGTAFHPDLDAAAFQLVVVKPRVSAFYATRLEAAL
CCCCCCCCCCCCCCHHHCCCEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH
RARRIERVIVAGVSTAWAVQAAARDAHDRDYEVLVLEDACAAATEDEHQRSIDTLRGIAR
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEECCHHHCCCHHHHHHHHHHHHHHH
IVTLDDLAAL
HHHHHHHHCC
>Mature Secondary Structure
MNTALIGLDYIVDIMHPTGKIARSAAHAAQRDVVGRFNRALAAAKQKDWLRIGVKVGFEP
CCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
GYADLPAHSPMFGRAQAFGALDLSGAGTAFHPDLDAAAFQLVVVKPRVSAFYATRLEAAL
CCCCCCCCCCCCCCHHHCCCEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH
RARRIERVIVAGVSTAWAVQAAARDAHDRDYEVLVLEDACAAATEDEHQRSIDTLRGIAR
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEECCHHHCCCHHHHHHHHHHHHHHH
IVTLDDLAAL
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]