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The map label for this gene is yadA [H]

Identifier: 76818786

GI number: 76818786

Start: 713890

End: 715026

Strand: Direct

Name: yadA [H]

Synonym: BURPS1710b_A0528

Alternate gene names: 76818786

Gene position: 713890-715026 (Clockwise)

Preceding gene: 76819374

Following gene: 76818668

Centisome position: 22.44

GC content: 69.57

Gene sequence:

>1137_bases
GTGGACGCGGTCATCCGAAACGCCGTCAATCTGGCGCCCGATGCGAACGGGGACTTCTCCGGCCGCTCGGCGATGCCGAT
CGAAATGGCCGCGAACGCCGCGCTGAGATCGCTGAAGAAAAATCCGGGCGACGCCGGCCATGCCGCTCCGGCATACCTGC
CTGCCGAGCGGATCGGCCAGTTGCGGGAAAAGGTCCGAAGGACCATCGAGGCGCTCGAATCGAACCGCCCACCGAAACCG
CAGCCGCGGTCGACACCACCGCAATCGACGCCACCCAAGCCGACGCAGCACCCGACCGCGCCCAACCCGAACGTACCCGA
CGCATCGACGCCTGATGCATCGACGCCTGACGCTTCGACGCCCGACGCATCGACGCCCGACGCATCGACGCCCAGCCGAC
CTGCCCCTGCCCCCCGAGCGGGCACGGGCGCGCCCGCTGCTTCGGCGGCGACGCGCGCCCCCGCCTTTGCAAACCGCGTG
CGCAAGCCGAATCCGGCTATGCCCGCCGCGTCGTCGCATGCGATCGCGAGCGACTTCGCGTCGAGCAACGCGTTCGCGAT
CGGCGACGACTCGACCGCCGTCGGAGCGCAAGCGATCGCGTTCAGCGAGCAATCGATCGCCATAGGCTCGCGCGCGATTG
CCGCCGGCGCCCGTTCGATCGCCGTCGGCACGGACGCGACAGCAGCCGCCCCCGATTCGGTCGCCCTCGGCTCGGGCTCC
ATCGCCGAACGCGAAGGCACGGTGTCCGTCGGCAGAGACGGCCACGAACGCCAGATCACCCATGTCGCATCCGGCACCGA
GCCCACCGACGCCGTCAACGTCACGCAACTGCGCGCGGCAATGTCGAACGCCAACGCGTACACGAACCAGCGCATCGGCG
ATCTTCAGCAGAGCATCACCGACACCGCGCGCGACGCGTATTCCGGCGTCGCCGCCGCGACCGCGCTGACGATGATTCCC
GATGTCGACCGCGACAAGAGGGTGTCGATCGGCGTCGGCGGCGCGGTCTACAAGGGCCATCGCGCCGTCGCGCTCGGCGG
CACCGCGCGCATCAACGAAAACCTCAAGGTGCGGGCGGGCGTCGCGATGAGCGCGGGCGGCAATGCCGTGGGCATCGGCA
TGAGCTGGCAATGGTAA

Upstream 100 bases:

>100_bases
CGCGAGCACGCCGACCAAGACCGGTCTGCTGAAAACGCTCAATCGGTTGTCCGCGGAGCTTCAGAACAACCCGCGTGTAA
CCGAGGACGTAGTCGACAAC

Downstream 100 bases:

>100_bases
GCACCCGCAAACCCCCCCGGGCATCGCTCAGCGCCGGCCAGCGCGCGGCGCACCCATCGTCAACGAGGCACGCGACACGA
TGAAACTTCCGATTCTTCCC

Product: Hep_Hag family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MDAVIRNAVNLAPDANGDFSGRSAMPIEMAANAALRSLKKNPGDAGHAAPAYLPAERIGQLREKVRRTIEALESNRPPKP
QPRSTPPQSTPPKPTQHPTAPNPNVPDASTPDASTPDASTPDASTPDASTPSRPAPAPRAGTGAPAASAATRAPAFANRV
RKPNPAMPAASSHAIASDFASSNAFAIGDDSTAVGAQAIAFSEQSIAIGSRAIAAGARSIAVGTDATAAAPDSVALGSGS
IAEREGTVSVGRDGHERQITHVASGTEPTDAVNVTQLRAAMSNANAYTNQRIGDLQQSITDTARDAYSGVAAATALTMIP
DVDRDKRVSIGVGGAVYKGHRAVALGGTARINENLKVRAGVAMSAGGNAVGIGMSWQW

Sequences:

>Translated_378_residues
MDAVIRNAVNLAPDANGDFSGRSAMPIEMAANAALRSLKKNPGDAGHAAPAYLPAERIGQLREKVRRTIEALESNRPPKP
QPRSTPPQSTPPKPTQHPTAPNPNVPDASTPDASTPDASTPDASTPDASTPSRPAPAPRAGTGAPAASAATRAPAFANRV
RKPNPAMPAASSHAIASDFASSNAFAIGDDSTAVGAQAIAFSEQSIAIGSRAIAAGARSIAVGTDATAAAPDSVALGSGS
IAEREGTVSVGRDGHERQITHVASGTEPTDAVNVTQLRAAMSNANAYTNQRIGDLQQSITDTARDAYSGVAAATALTMIP
DVDRDKRVSIGVGGAVYKGHRAVALGGTARINENLKVRAGVAMSAGGNAVGIGMSWQW
>Mature_378_residues
MDAVIRNAVNLAPDANGDFSGRSAMPIEMAANAALRSLKKNPGDAGHAAPAYLPAERIGQLREKVRRTIEALESNRPPKP
QPRSTPPQSTPPKPTQHPTAPNPNVPDASTPDASTPDASTPDASTPDASTPSRPAPAPRAGTGAPAASAATRAPAFANRV
RKPNPAMPAASSHAIASDFASSNAFAIGDDSTAVGAQAIAFSEQSIAIGSRAIAAGARSIAVGTDATAAAPDSVALGSGS
IAEREGTVSVGRDGHERQITHVASGTEPTDAVNVTQLRAAMSNANAYTNQRIGDLQQSITDTARDAYSGVAAATALTMIP
DVDRDKRVSIGVGGAVYKGHRAVALGGTARINENLKVRAGVAMSAGGNAVGIGMSWQW

Specific function: Collagen-binding outer membrane protein forming a fibrillar matrix on the bacterial cell surface. Promotes initial attachment and invasion of eukaryotic cells. Also protects the bacteria by being responsible for agglutination, serum resistance, complement

COG id: COG5295

COG function: function code UW; Autotransporter adhesin

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the autotransporter-2 (TC 1.B.40) / oligomeric coiled-coil adhesin (Oca) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008640
- InterPro:   IPR008635
- InterPro:   IPR008126
- InterPro:   IPR005594 [H]

Pfam domain/function: PF05658 Hep_Hag; PF05662 HIM; PF03895 YadA [H]

EC number: NA

Molecular weight: Translated: 38317; Mature: 38317

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAVIRNAVNLAPDANGDFSGRSAMPIEMAANAALRSLKKNPGDAGHAAPAYLPAERIGQ
CCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
LREKVRRTIEALESNRPPKPQPRSTPPQSTPPKPTQHPTAPNPNVPDASTPDASTPDAST
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDASTPDASTPSRPAPAPRAGTGAPAASAATRAPAFANRVRKPNPAMPAASSHAIASDFA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHCCCCCCCCCCCCCHHHHHHHC
SSNAFAIGDDSTAVGAQAIAFSEQSIAIGSRAIAAGARSIAVGTDATAAAPDSVALGSGS
CCCCEEECCCCCHHCHHHEEECCCHHHHCCHHHHHCCCEEEECCCCCCCCCCCEECCCCC
IAEREGTVSVGRDGHERQITHVASGTEPTDAVNVTQLRAAMSNANAYTNQRIGDLQQSIT
CCCCCCCEEECCCCCHHHEEHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
DTARDAYSGVAAATALTMIPDVDRDKRVSIGVGGAVYKGHRAVALGGTARINENLKVRAG
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEECCCEEEEECCCEEECCCEEEEEC
VAMSAGGNAVGIGMSWQW
EEEECCCCEEEECCCCCC
>Mature Secondary Structure
MDAVIRNAVNLAPDANGDFSGRSAMPIEMAANAALRSLKKNPGDAGHAAPAYLPAERIGQ
CCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
LREKVRRTIEALESNRPPKPQPRSTPPQSTPPKPTQHPTAPNPNVPDASTPDASTPDAST
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDASTPDASTPSRPAPAPRAGTGAPAASAATRAPAFANRVRKPNPAMPAASSHAIASDFA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHCCCCCCCCCCCCCHHHHHHHC
SSNAFAIGDDSTAVGAQAIAFSEQSIAIGSRAIAAGARSIAVGTDATAAAPDSVALGSGS
CCCCEEECCCCCHHCHHHEEECCCHHHHCCHHHHHCCCEEEECCCCCCCCCCCEECCCCC
IAEREGTVSVGRDGHERQITHVASGTEPTDAVNVTQLRAAMSNANAYTNQRIGDLQQSIT
CCCCCCCEEECCCCCHHHEEHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
DTARDAYSGVAAATALTMIPDVDRDKRVSIGVGGAVYKGHRAVALGGTARINENLKVRAG
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEECCCEEEEECCCEEECCCEEEEEC
VAMSAGGNAVGIGMSWQW
EEEECCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2761389; 7934875; 2592347; 1548243 [H]