Definition Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence.
Accession NC_007435
Length 3,181,762

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The map label for this gene is nfdA [H]

Identifier: 76818765

GI number: 76818765

Start: 2423911

End: 2425809

Strand: Direct

Name: nfdA [H]

Synonym: BURPS1710b_A1987

Alternate gene names: 76818765

Gene position: 2423911-2425809 (Clockwise)

Preceding gene: 76817434

Following gene: 76818363

Centisome position: 76.18

GC content: 69.35

Gene sequence:

>1899_bases
ATGGCTGACACCGCCGCCCGCCCAACCCCCGACCTGATCCTGCATCGCGGCCGCTTCACGACGCTCGATCGCGCGCATCC
GCTCGCGAGCGCGGTCGCGATCAAGGACGGCCGATTCGTCGCCGTCGGCGGCGACGAAATCCTCGCGTCGGCGGGGCCCG
CCACGCGCATCGTCGATCTGCAGGGCAAGGGCGTGCTGCCCGGCCTGATCGACAACCATCTGCACATCATTCGCGGCGGC
CTGAACTTCAACATGGAGCTGCGCTGGGACGGCGTGCGCAGCCTTGCCGACGCGATGGCGATGCTGCGCCGCCAGGTGGC
CGTGACGCCCGCGCCGCAATGGGTGCGCGTGGTCGGCGGCTTCACCGAGCATCAGTTCGCGGAGAAGCGCCTGCCGACGA
TCGACGAGCTGAACGCGGCCGCGCCCGACACGCCCGTCTTCATCCTGCATCTGTACGATCGCGCGCTGCTCAACGGCGCG
GCGCTGCGCGCGGTCGGCTACACGAAGGACACGCCGGAGCCGCCCGGCGGGCAGATCGTGCGCGACGCGGCGGGCAACCC
CACCGGGCTGCTGCTCGCGCGGCCGAACGCGGCGATCCTGTATGCGACGCTCGCGAAAGGGCCGAAGCTGCCGTTCGACT
ATCAGCTGAATTCGACGCGGCACTTCATGCGCGAGCTGAACCGGCTCGGCGTGACGGGCGCGATCGACGCGGGCGGCGGT
TTCCAGAACTATCCGGACGACTACGCGGTGATCGAGCGGCTCGCGAAGGATGGTCAACTGACGATCCGCCTTGCGTACAA
CCTGTTCACGCAGAAGCCGAAGGAGGAGAAGCAGGATTTCCTGAACTGGACCGCGTCGTCGACCTACCACGACGGCACCG
ACTATTTCCGGCACAACGGCGCGGGCGAGATGCTGGTGTTCTCGGCGGCCGATTTCGAGGACTTCCGCGAGCCGCGCCCC
GATCTGCCGGCGCAGATGGAAGGCGAGCTCGAGGCGGTCGTGCGCGTGCTCGCGCAGAACCGTTGGCCGTGGCGGCTGCA
CGCGACGTACGACGAAACGATCCGCCGCGCGCTCGACGTGTTCGAGCGCGTGAATCGCGACATTCCGCTTGCCGGCCTGA
ACTGGTTCTTCGATCACGCGGAAACGATCTCCGACGAGTCGATCGACCGGATCGCCGCGCTCGGCGGCGGGATCGCGGTC
CAGCACCGGATGGCGTACCAGGGCGAATACTTCGTCGAGCGCTATGGCGCGGCCGCCGCCGAGGCGACGCCGCCGGTTGC
GCGCATGCTCGAGCGGGGCGTCAACGTATCGGCCGGCACCGACGCGACGCGCGTCGCGTCGTACAACCCGTGGGTGTCGC
TCGCGTGGCTCGTCACCGGCAAGACGGTGGGCGGCATGTCGCTCTATCCGCGCGCGAACTGCATCGATCGCGAGACCGCG
CTCAGGATGTGGACCGAGCATGTCACGTGGTTCTCGAACGAAGTCGGCAAGAAAGGCCGGATCCAGGTCGGGCAGCTCGC
GGATCTGATCGTGCCCGACCGCGATTTCTTCGCGTGCCCGGAATCCGACATCGCGGATACGACCTCGCTGCTGACCGTCG
TCGGCGGCAAGGTCGTGTACGGCGCGGGGCCGTTCGCCGACCTCGACGAAGGCGCGCCGCCGCCCGCAATGCCGGACTGG
TCGCCCGCGCGCACGTTCGGCGGCTATGCCGGCTGGGCCGACCGCGAGGGCGGCGCGCCGCTGCAGCAGGTCGTGCGGCA
GGCGGCCCAGTCGTGCGCGTGCGCGAACAGTTGCGGGGTGCATGCGCACCGTCACGCGAGCGCGTGGGGCAGCTCGTTGC
CCGTCGCCGATCTGAAGAGCTTCTGGGGCGCGCTCGGCTGTTCGTGCTGGGCGGTATGA

Upstream 100 bases:

>100_bases
CACATGTTCGGCCAACTGCCGAGCTGCCCGAAGGCGCCCGACGCGCCGGCGCAGGTCGCCGCCGCCCGCCCACCCGCTTC
GCGTTCCGGAGACACGCACC

Downstream 100 bases:

>100_bases
CCGCGGGCGGCGCGCGGCGCGGCGCTCGCGTCGCTCGCGTCGCGCGCCGCTCGTCGTCCGTCGCGTGGCGCACCGCGTAT
CGCGCATCGCGCATGGAGCT

Product: RC145

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 632; Mature: 631

Protein sequence:

>632_residues
MADTAARPTPDLILHRGRFTTLDRAHPLASAVAIKDGRFVAVGGDEILASAGPATRIVDLQGKGVLPGLIDNHLHIIRGG
LNFNMELRWDGVRSLADAMAMLRRQVAVTPAPQWVRVVGGFTEHQFAEKRLPTIDELNAAAPDTPVFILHLYDRALLNGA
ALRAVGYTKDTPEPPGGQIVRDAAGNPTGLLLARPNAAILYATLAKGPKLPFDYQLNSTRHFMRELNRLGVTGAIDAGGG
FQNYPDDYAVIERLAKDGQLTIRLAYNLFTQKPKEEKQDFLNWTASSTYHDGTDYFRHNGAGEMLVFSAADFEDFREPRP
DLPAQMEGELEAVVRVLAQNRWPWRLHATYDETIRRALDVFERVNRDIPLAGLNWFFDHAETISDESIDRIAALGGGIAV
QHRMAYQGEYFVERYGAAAAEATPPVARMLERGVNVSAGTDATRVASYNPWVSLAWLVTGKTVGGMSLYPRANCIDRETA
LRMWTEHVTWFSNEVGKKGRIQVGQLADLIVPDRDFFACPESDIADTTSLLTVVGGKVVYGAGPFADLDEGAPPPAMPDW
SPARTFGGYAGWADREGGAPLQQVVRQAAQSCACANSCGVHAHRHASAWGSSLPVADLKSFWGALGCSCWAV

Sequences:

>Translated_632_residues
MADTAARPTPDLILHRGRFTTLDRAHPLASAVAIKDGRFVAVGGDEILASAGPATRIVDLQGKGVLPGLIDNHLHIIRGG
LNFNMELRWDGVRSLADAMAMLRRQVAVTPAPQWVRVVGGFTEHQFAEKRLPTIDELNAAAPDTPVFILHLYDRALLNGA
ALRAVGYTKDTPEPPGGQIVRDAAGNPTGLLLARPNAAILYATLAKGPKLPFDYQLNSTRHFMRELNRLGVTGAIDAGGG
FQNYPDDYAVIERLAKDGQLTIRLAYNLFTQKPKEEKQDFLNWTASSTYHDGTDYFRHNGAGEMLVFSAADFEDFREPRP
DLPAQMEGELEAVVRVLAQNRWPWRLHATYDETIRRALDVFERVNRDIPLAGLNWFFDHAETISDESIDRIAALGGGIAV
QHRMAYQGEYFVERYGAAAAEATPPVARMLERGVNVSAGTDATRVASYNPWVSLAWLVTGKTVGGMSLYPRANCIDRETA
LRMWTEHVTWFSNEVGKKGRIQVGQLADLIVPDRDFFACPESDIADTTSLLTVVGGKVVYGAGPFADLDEGAPPPAMPDW
SPARTFGGYAGWADREGGAPLQQVVRQAAQSCACANSCGVHAHRHASAWGSSLPVADLKSFWGALGCSCWAV
>Mature_631_residues
ADTAARPTPDLILHRGRFTTLDRAHPLASAVAIKDGRFVAVGGDEILASAGPATRIVDLQGKGVLPGLIDNHLHIIRGGL
NFNMELRWDGVRSLADAMAMLRRQVAVTPAPQWVRVVGGFTEHQFAEKRLPTIDELNAAAPDTPVFILHLYDRALLNGAA
LRAVGYTKDTPEPPGGQIVRDAAGNPTGLLLARPNAAILYATLAKGPKLPFDYQLNSTRHFMRELNRLGVTGAIDAGGGF
QNYPDDYAVIERLAKDGQLTIRLAYNLFTQKPKEEKQDFLNWTASSTYHDGTDYFRHNGAGEMLVFSAADFEDFREPRPD
LPAQMEGELEAVVRVLAQNRWPWRLHATYDETIRRALDVFERVNRDIPLAGLNWFFDHAETISDESIDRIAALGGGIAVQ
HRMAYQGEYFVERYGAAAAEATPPVARMLERGVNVSAGTDATRVASYNPWVSLAWLVTGKTVGGMSLYPRANCIDRETAL
RMWTEHVTWFSNEVGKKGRIQVGQLADLIVPDRDFFACPESDIADTTSLLTVVGGKVVYGAGPFADLDEGAPPPAMPDWS
PARTFGGYAGWADREGGAPLQQVVRQAAQSCACANSCGVHAHRHASAWGSSLPVADLKSFWGALGCSCWAV

Specific function: Hydrolyzes N-substituted formamides, but not amides. N- benzylformamide is the preferred substrate, while N-butylformamide is hydrolyzed at a much lower rate. Has very low activity towards allylformamide, N-(2-cyclohex-1-enylethyl)formamide and N-(alpha-

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: =3.5.1.91 [H]

Molecular weight: Translated: 68927; Mature: 68795

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTAARPTPDLILHRGRFTTLDRAHPLASAVAIKDGRFVAVGGDEILASAGPATRIVDL
CCCCCCCCCHHHEEECCCCCCCHHCCCHHHHEEECCCCEEEECCHHHHHCCCCCEEEEEE
QGKGVLPGLIDNHLHIIRGGLNFNMELRWDGVRSLADAMAMLRRQVAVTPAPQWVRVVGG
CCCCCCCHHHHCCEEEEECCCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
FTEHQFAEKRLPTIDELNAAAPDTPVFILHLYDRALLNGAALRAVGYTKDTPEPPGGQIV
CHHHHHHHHCCCCHHHHCCCCCCCCEEEEEEHHHHHHCCHHHEEECCCCCCCCCCCCCEE
RDAAGNPTGLLLARPNAAILYATLAKGPKLPFDYQLNSTRHFMRELNRLGVTGAIDAGGG
ECCCCCCCEEEEECCCCEEEEEEECCCCCCCEEEECCHHHHHHHHHHHCCCCEEEECCCC
FQNYPDDYAVIERLAKDGQLTIRLAYNLFTQKPKEEKQDFLNWTASSTYHDGTDYFRHNG
CCCCCCHHHHHHHHHCCCCEEEEEEEHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHCCC
AGEMLVFSAADFEDFREPRPDLPAQMEGELEAVVRVLAQNRWPWRLHATYDETIRRALDV
CCCEEEEECCCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHH
FERVNRDIPLAGLNWFFDHAETISDESIDRIAALGGGIAVQHRMAYQGEYFVERYGAAAA
HHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEHHHHHHCCHHHHHHHCCCCC
EATPPVARMLERGVNVSAGTDATRVASYNPWVSLAWLVTGKTVGGMSLYPRANCIDRETA
CCCCHHHHHHHCCCCCCCCCCCHHEECCCCCEEEEEEEECCCCCCEEECCCCCCCCHHHH
LRMWTEHVTWFSNEVGKKGRIQVGQLADLIVPDRDFFACPESDIADTTSLLTVVGGKVVY
HHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEE
GAGPFADLDEGAPPPAMPDWSPARTFGGYAGWADREGGAPLQQVVRQAAQSCACANSCGV
CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
HAHRHASAWGSSLPVADLKSFWGALGCSCWAV
CCHHHHHHCCCCCCHHHHHHHHHHHCCCEECC
>Mature Secondary Structure 
ADTAARPTPDLILHRGRFTTLDRAHPLASAVAIKDGRFVAVGGDEILASAGPATRIVDL
CCCCCCCCHHHEEECCCCCCCHHCCCHHHHEEECCCCEEEECCHHHHHCCCCCEEEEEE
QGKGVLPGLIDNHLHIIRGGLNFNMELRWDGVRSLADAMAMLRRQVAVTPAPQWVRVVGG
CCCCCCCHHHHCCEEEEECCCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
FTEHQFAEKRLPTIDELNAAAPDTPVFILHLYDRALLNGAALRAVGYTKDTPEPPGGQIV
CHHHHHHHHCCCCHHHHCCCCCCCCEEEEEEHHHHHHCCHHHEEECCCCCCCCCCCCCEE
RDAAGNPTGLLLARPNAAILYATLAKGPKLPFDYQLNSTRHFMRELNRLGVTGAIDAGGG
ECCCCCCCEEEEECCCCEEEEEEECCCCCCCEEEECCHHHHHHHHHHHCCCCEEEECCCC
FQNYPDDYAVIERLAKDGQLTIRLAYNLFTQKPKEEKQDFLNWTASSTYHDGTDYFRHNG
CCCCCCHHHHHHHHHCCCCEEEEEEEHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHCCC
AGEMLVFSAADFEDFREPRPDLPAQMEGELEAVVRVLAQNRWPWRLHATYDETIRRALDV
CCCEEEEECCCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHH
FERVNRDIPLAGLNWFFDHAETISDESIDRIAALGGGIAVQHRMAYQGEYFVERYGAAAA
HHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEHHHHHHCCHHHHHHHCCCCC
EATPPVARMLERGVNVSAGTDATRVASYNPWVSLAWLVTGKTVGGMSLYPRANCIDRETA
CCCCHHHHHHHCCCCCCCCCCCHHEECCCCCEEEEEEEECCCCCCEEECCCCCCCCHHHH
LRMWTEHVTWFSNEVGKKGRIQVGQLADLIVPDRDFFACPESDIADTTSLLTVVGGKVVY
HHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEE
GAGPFADLDEGAPPPAMPDWSPARTFGGYAGWADREGGAPLQQVVRQAAQSCACANSCGV
CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
HAHRHASAWGSSLPVADLKSFWGALGCSCWAV
CCHHHHHHCCCCCCHHHHHHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA