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The map label for this gene is yhiX [C]

Identifier: 76818659

GI number: 76818659

Start: 1916474

End: 1917091

Strand: Direct

Name: yhiX [C]

Synonym: BURPS1710b_A1576

Alternate gene names: 76818659

Gene position: 1916474-1917091 (Clockwise)

Preceding gene: 76817692

Following gene: 76819491

Centisome position: 60.23

GC content: 71.2

Gene sequence:

>618_bases
TTGGCGCGTCGGCCTTCGGCCGGTTCCGGGAGGCGCGGAGTCGCGCGCCGCGCGGGCTTGCCGCATGCTGGTCGCGGTTG
GGCTGCGCGGCGGGCAGACGGTCGTTTGCCGCGTCAAGCCTTCTCTATCCGCGTCCGCCTTCGCGTTCGCGGCCGGCTGC
CGAAGGCGCGCTTTCGCGCGCCCGACAACCGGCTGCGGCTGCCGGCATCGAGCTTGCCGCGCCGGCTCGCGCTCGCGAAC
AACGAGGCTCATGCGCAGGCACTCGGCCAGCTCGACCGCGAGATGGCGCGGCTCAATCTCGACGGGCCGGCGCTTGCCGA
CCGTGTTCGCGCGGAATTGACGTTGACCGAGAGCGGCTATCCGTCGCTCGCGCGGCTCGCGTCGAAGCTGTTCCTGTCCG
AACGCACGCTGAAACGCCGGTTGCAGGCGCACGGCACGTCGTATCGGAACATGCTCGAGGCCGCGCGCTATCGCGACGCG
TGCCGGTTGCTGACGCGCACCGATCGGTGCGTCGCCGATGTCTCGACGCGGCTCGGCTATGTGAATCCTTCCGCGTTCAC
GCGCGCCTTTCGCCGCTGGGCCGGCATCGCGCCCAGCCGCTATCGCGACGACCGCTGA

Upstream 100 bases:

>100_bases
TCTCCGAGGCGGGTGGCGGGCCGGGGCGGCGCACGCATGTCGCCGAACAACGTGTTGACCGCCGCATAGGGAGTCGAACC
GACCGGCGTGCGAATGGGTA

Downstream 100 bases:

>100_bases
CGCCTGCCGATCGACGGCGACGGTCGCCGAGGCTCATCGGCGGGCGCTGTCGACGAGCGTTCTATGAGCGCCGCTGCCGC
CAGCGGCTTCGCCAATGGCC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MARRPSAGSGRRGVARRAGLPHAGRGWAARRADGRLPRQAFSIRVRLRVRGRLPKARFRAPDNRLRLPASSLPRRLALAN
NEAHAQALGQLDREMARLNLDGPALADRVRAELTLTESGYPSLARLASKLFLSERTLKRRLQAHGTSYRNMLEAARYRDA
CRLLTRTDRCVADVSTRLGYVNPSAFTRAFRRWAGIAPSRYRDDR

Sequences:

>Translated_205_residues
MARRPSAGSGRRGVARRAGLPHAGRGWAARRADGRLPRQAFSIRVRLRVRGRLPKARFRAPDNRLRLPASSLPRRLALAN
NEAHAQALGQLDREMARLNLDGPALADRVRAELTLTESGYPSLARLASKLFLSERTLKRRLQAHGTSYRNMLEAARYRDA
CRLLTRTDRCVADVSTRLGYVNPSAFTRAFRRWAGIAPSRYRDDR
>Mature_204_residues
ARRPSAGSGRRGVARRAGLPHAGRGWAARRADGRLPRQAFSIRVRLRVRGRLPKARFRAPDNRLRLPASSLPRRLALANN
EAHAQALGQLDREMARLNLDGPALADRVRAELTLTESGYPSLARLASKLFLSERTLKRRLQAHGTSYRNMLEAARYRDAC
RLLTRTDRCVADVSTRLGYVNPSAFTRAFRRWAGIAPSRYRDDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 23122; Mature: 22991

Theoretical pI: Translated: 12.40; Mature: 12.40

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRPSAGSGRRGVARRAGLPHAGRGWAARRADGRLPRQAFSIRVRLRVRGRLPKARFRA
CCCCCCCCCCCCCHHHHCCCCCCCCCCHHHCCCCCCCHHHHHEEEEEEECCCCCHHHHCC
PDNRLRLPASSLPRRLALANNEAHAQALGQLDREMARLNLDGPALADRVRAELTLTESGY
CCCCEECCHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEECCCCC
PSLARLASKLFLSERTLKRRLQAHGTSYRNMLEAARYRDACRLLTRTDRCVADVSTRLGY
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VNPSAFTRAFRRWAGIAPSRYRDDR
CCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ARRPSAGSGRRGVARRAGLPHAGRGWAARRADGRLPRQAFSIRVRLRVRGRLPKARFRA
CCCCCCCCCCCCHHHHCCCCCCCCCCHHHCCCCCCCHHHHHEEEEEEECCCCCHHHHCC
PDNRLRLPASSLPRRLALANNEAHAQALGQLDREMARLNLDGPALADRVRAELTLTESGY
CCCCEECCHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEECCCCC
PSLARLASKLFLSERTLKRRLQAHGTSYRNMLEAARYRDACRLLTRTDRCVADVSTRLGY
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VNPSAFTRAFRRWAGIAPSRYRDDR
CCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036; 12368430 [H]