Click here to switch to the map view.

The map label for this gene is yktD [H]

Identifier: 76818620

GI number: 76818620

Start: 505482

End: 506342

Strand: Direct

Name: yktD [H]

Synonym: BURPS1710b_A0354

Alternate gene names: 76818620

Gene position: 505482-506342 (Clockwise)

Preceding gene: 76818011

Following gene: 76819499

Centisome position: 15.89

GC content: 72.01

Gene sequence:

>861_bases
ATGTCGAATCAATCGATCGGCGCGCCGGACAGCACCGCGGTGCGGGTCGCGCTGTGGCGCGCGCTGCACGCCCGGATCGA
CGCGCCGCCGCACGTGCTCGACGATGAGATCGGCCTCGCGTTGGCCGCCCCCGACGACGACTGGCGCAGCCGCCCGGACA
TGGATCCGCAGGCGAGCCGGGGCTACCGCGCGTCGATCGTCGGCCGCGCCCGCTTCGTCGAGGACCTGGTCGACGAGCAG
GCCGACCGCGGCGTCGCGCAGTATGTGGTGCTCGGCGCGGGCCTGGACACGTTCGCGCAGCGCCGCGCGAAGCTCGCATC
GCACCTTCGCGTATTCGAAATCGACCAGCCCGGCACGCAGGCATGGAAGCGGCAGCGCCTGATCGCGCTCGGCTACGGCG
TGCCGCAATGGCTGCGGCTCGTGCCGGTCGATTTCGAGACGAGCGGCGCGTGGCGGGCGCAACTGAGCGCCGCGGGCTTC
GACGACAGCCGGCCCGCCGTCGTGTCGTCGACGGGCGTCTCGATGTATCTGACCCGCGAGGCGATCGCCGGCACGCTGAG
CCAGATCGCGACGCTCGCGCCGGGCTCGACGCTCGCGATGACGTTCCTGCTGCCGCTCGAACTCATCGACGATCCGGCCG
AGCGCGCTCAGCACGCGGCCGTCTACGAACGCGCGCGGGCGGCGGGCACGCCGTTCGTCAGCTTCTTCAGCCCGTCCGAC
ATGCTCGCGCTCGCGCGCGAAGCAGGTTTTCGCGAGGCGCGGCACGTGTCGACCGACGATCTCGTCCGGCGCTATTTCGA
GAGCCGGCCCGACGGCCTGCGGCCCGCGAGCGGCGAGGCGTTTCTGGTCGCGTCGACTTGA

Upstream 100 bases:

>100_bases
GCATGCCGAAGCTCAGGGCGACATCACGCGAGCGGGAAATCGGGAGACCGATACACTGTGACGTATCGACGAAATTCGTC
TAACGAACGGAGGAAACGTC

Downstream 100 bases:

>100_bases
AGGGAAACGCCCGGCCGGGCACGTGACGAAACGCCGGTCGCGATTCGGCTGAGGGCCGGCTGCCGCGCAGCGCGCGCGCA
ACCGCGGATCGCCTCGGCAT

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MSNQSIGAPDSTAVRVALWRALHARIDAPPHVLDDEIGLALAAPDDDWRSRPDMDPQASRGYRASIVGRARFVEDLVDEQ
ADRGVAQYVVLGAGLDTFAQRRAKLASHLRVFEIDQPGTQAWKRQRLIALGYGVPQWLRLVPVDFETSGAWRAQLSAAGF
DDSRPAVVSSTGVSMYLTREAIAGTLSQIATLAPGSTLAMTFLLPLELIDDPAERAQHAAVYERARAAGTPFVSFFSPSD
MLALAREAGFREARHVSTDDLVRRYFESRPDGLRPASGEAFLVAST

Sequences:

>Translated_286_residues
MSNQSIGAPDSTAVRVALWRALHARIDAPPHVLDDEIGLALAAPDDDWRSRPDMDPQASRGYRASIVGRARFVEDLVDEQ
ADRGVAQYVVLGAGLDTFAQRRAKLASHLRVFEIDQPGTQAWKRQRLIALGYGVPQWLRLVPVDFETSGAWRAQLSAAGF
DDSRPAVVSSTGVSMYLTREAIAGTLSQIATLAPGSTLAMTFLLPLELIDDPAERAQHAAVYERARAAGTPFVSFFSPSD
MLALAREAGFREARHVSTDDLVRRYFESRPDGLRPASGEAFLVAST
>Mature_285_residues
SNQSIGAPDSTAVRVALWRALHARIDAPPHVLDDEIGLALAAPDDDWRSRPDMDPQASRGYRASIVGRARFVEDLVDEQA
DRGVAQYVVLGAGLDTFAQRRAKLASHLRVFEIDQPGTQAWKRQRLIALGYGVPQWLRLVPVDFETSGAWRAQLSAAGFD
DSRPAVVSSTGVSMYLTREAIAGTLSQIATLAPGSTLAMTFLLPLELIDDPAERAQHAAVYERARAAGTPFVSFFSPSDM
LALAREAGFREARHVSTDDLVRRYFESRPDGLRPASGEAFLVAST

Specific function: May be involved in polyketide synthesis [H]

COG id: COG3315

COG function: function code Q; O-Methyltransferase involved in polyketide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0677 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011610
- InterPro:   IPR007213 [H]

Pfam domain/function: PF04072 LCM [H]

EC number: NA

Molecular weight: Translated: 31160; Mature: 31029

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNQSIGAPDSTAVRVALWRALHARIDAPPHVLDDEIGLALAAPDDDWRSRPDMDPQASR
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHCCCCCCCCCCCC
GYRASIVGRARFVEDLVDEQADRGVAQYVVLGAGLDTFAQRRAKLASHLRVFEIDQPGTQ
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCHHHHHHHHHHHHHCCEEEECCCCCHH
AWKRQRLIALGYGVPQWLRLVPVDFETSGAWRAQLSAAGFDDSRPAVVSSTGVSMYLTRE
HHHHCCCEEECCCCHHHHEEECCCCCCCCCCEEEHEECCCCCCCCCEEECCCCEEEEEHH
AIAGTLSQIATLAPGSTLAMTFLLPLELIDDPAERAQHAAVYERARAAGTPFVSFFSPSD
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCCHH
MLALAREAGFREARHVSTDDLVRRYFESRPDGLRPASGEAFLVAST
HHHHHHHHCHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure 
SNQSIGAPDSTAVRVALWRALHARIDAPPHVLDDEIGLALAAPDDDWRSRPDMDPQASR
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHCCCCCCCCCCCC
GYRASIVGRARFVEDLVDEQADRGVAQYVVLGAGLDTFAQRRAKLASHLRVFEIDQPGTQ
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCHHHHHHHHHHHHHCCEEEECCCCCHH
AWKRQRLIALGYGVPQWLRLVPVDFETSGAWRAQLSAAGFDDSRPAVVSSTGVSMYLTRE
HHHHCCCEEECCCCHHHHEEECCCCCCCCCCEEEHEECCCCCCCCCEEECCCCEEEEEHH
AIAGTLSQIATLAPGSTLAMTFLLPLELIDDPAERAQHAAVYERARAAGTPFVSFFSPSD
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCCHH
MLALAREAGFREARHVSTDDLVRRYFESRPDGLRPASGEAFLVAST
HHHHHHHHCHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1697575; 8990290; 8969500; 9384377 [H]