| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is 76818552
Identifier: 76818552
GI number: 76818552
Start: 1355741
End: 1357069
Strand: Direct
Name: 76818552
Synonym: BURPS1710b_A1086
Alternate gene names: NA
Gene position: 1355741-1357069 (Clockwise)
Preceding gene: 76817604
Following gene: 76818152
Centisome position: 42.61
GC content: 69.45
Gene sequence:
>1329_bases ATGAAGCGCTCCACGCCCAACCCGCGCCGCCGGCTGCTCGTCGCGCTCGCAGGCACGATGCTCACCGCGCCCGGCCTGCC GCGCGCGGCCACGCGCATCGTGCTCGACGCCGCCCGCACGAACGCCGACGCGACGCGCGGCTATATCGACTTGCCCGGCT TCGCCGCGTCGCGCAAGAACACCGGCATCGCCGTGCATGCGATCGACGACACGTCACTGCTCGACGCGGTGAAGGACGCC GGCTTCTCGTTCGTGCGCGCGGACCTGTTCTGGGAAGCAGTCGACACGCCGCACGGCTGGGATTTCTCACGGTACGACAC GCTCGTCGCCGAGCTGTCCGAGCGCGGGCTCGGCGCGCTGTTCATTCTCGGCGGCATCCATCGCGTGCACAGCCCGAACC GGCCGCCCACGACGCCCGCGCAGCTCGCCGCGTTCCGCCGCTATGTGTTCAACGCCGCGCAGCGCTACAAGGGCAAGCCG GTGCGCTTCGAGGTATGGAACGAGCAGGACCACAAGACCTACTGGCACGGCGAGCCGTCGCCCGTCGCGTACCGGAACGT GCTGAAGCTCGCGGTGCAGGCGGTGAAGGCCGCGGATCCCGACGCGATCGTCGCGACGGGCGGCGTGCAGCAGGTCAACC GCACCTTCATCCGCGCGGTCGGCGACATCGCCAGCCCGGCGCAGCCCGCGCCCGACGCGGTCAGCGTGCACCCGTACCGG CAAACCGAGCCGGAAACGGTGTTCGCCGACTACGCGGCGCTGCGCCGTGACCTGTCGTCTTACCGCAGGCCGCCGCAGAT CTGGGCGACCGAATGGTCGTACCCGAGCTACGGCTACAACTACGTGGCCGACATCGGCGACGGCCATTCGAGCGTCGCGC GCGCGCGCCAGGCGAACTACGCGGTGCGGCTGCTGCTCGCGAACTGGATTTCGCAGATCGGGCTCACGTCGTACTACGAC ATTCGCGACGACGGCCGCGACCGCACGAACATGGAGCACAACTTCGGACTCCTCGATGCGGACGACGCGCCGCTGCCCGC GTACATCGCGGTTCGGCGGCTGTTCGCGTTCACCGCGGATGCCGTGCGCGCCCGGTATTTTCTGGATCCGGACGCGCGCT ACGTGGTGCTGAAGCTGAGCGCCGCGCGTGCAACGAAATACGCGCTCTGGTGCTATGGCGACGGCAATGCGATCAGTGTC GATCTGTCGCGGCTGCCCGCCGGCGCCACGGTGACGAACATGTACGGCGCCGCGCTCGACGCCGGCAACCGCAGGCGGCT CGACGTGCCGGAGGCACGCGGGCCGGTATTCATCACGATCGAAGCATGA
Upstream 100 bases:
>100_bases GGAAGCGCGCGCATCGCGTTCGAGCGGCTGCGATACGGCGCGGGCGTGATCGCGCCGAATGCGCGCTGACGCCGCCGCGT GACGCGAAGGAAACGACGAT
Downstream 100 bases:
>100_bases GCGCCGTGCCCGGCTTCATGACCGCACGAAGCCGGATTCGCTCGACGCTCGATGAAGAGGATTGACTGAGAGGATTGCGA CGGCCGCGCACCGCGACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family Protein; Family 5 Glycosyl Hydrolase
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MKRSTPNPRRRLLVALAGTMLTAPGLPRAATRIVLDAARTNADATRGYIDLPGFAASRKNTGIAVHAIDDTSLLDAVKDA GFSFVRADLFWEAVDTPHGWDFSRYDTLVAELSERGLGALFILGGIHRVHSPNRPPTTPAQLAAFRRYVFNAAQRYKGKP VRFEVWNEQDHKTYWHGEPSPVAYRNVLKLAVQAVKAADPDAIVATGGVQQVNRTFIRAVGDIASPAQPAPDAVSVHPYR QTEPETVFADYAALRRDLSSYRRPPQIWATEWSYPSYGYNYVADIGDGHSSVARARQANYAVRLLLANWISQIGLTSYYD IRDDGRDRTNMEHNFGLLDADDAPLPAYIAVRRLFAFTADAVRARYFLDPDARYVVLKLSAARATKYALWCYGDGNAISV DLSRLPAGATVTNMYGAALDAGNRRRLDVPEARGPVFITIEA
Sequences:
>Translated_442_residues MKRSTPNPRRRLLVALAGTMLTAPGLPRAATRIVLDAARTNADATRGYIDLPGFAASRKNTGIAVHAIDDTSLLDAVKDA GFSFVRADLFWEAVDTPHGWDFSRYDTLVAELSERGLGALFILGGIHRVHSPNRPPTTPAQLAAFRRYVFNAAQRYKGKP VRFEVWNEQDHKTYWHGEPSPVAYRNVLKLAVQAVKAADPDAIVATGGVQQVNRTFIRAVGDIASPAQPAPDAVSVHPYR QTEPETVFADYAALRRDLSSYRRPPQIWATEWSYPSYGYNYVADIGDGHSSVARARQANYAVRLLLANWISQIGLTSYYD IRDDGRDRTNMEHNFGLLDADDAPLPAYIAVRRLFAFTADAVRARYFLDPDARYVVLKLSAARATKYALWCYGDGNAISV DLSRLPAGATVTNMYGAALDAGNRRRLDVPEARGPVFITIEA >Mature_442_residues MKRSTPNPRRRLLVALAGTMLTAPGLPRAATRIVLDAARTNADATRGYIDLPGFAASRKNTGIAVHAIDDTSLLDAVKDA GFSFVRADLFWEAVDTPHGWDFSRYDTLVAELSERGLGALFILGGIHRVHSPNRPPTTPAQLAAFRRYVFNAAQRYKGKP VRFEVWNEQDHKTYWHGEPSPVAYRNVLKLAVQAVKAADPDAIVATGGVQQVNRTFIRAVGDIASPAQPAPDAVSVHPYR QTEPETVFADYAALRRDLSSYRRPPQIWATEWSYPSYGYNYVADIGDGHSSVARARQANYAVRLLLANWISQIGLTSYYD IRDDGRDRTNMEHNFGLLDADDAPLPAYIAVRRLFAFTADAVRARYFLDPDARYVVLKLSAARATKYALWCYGDGNAISV DLSRLPAGATVTNMYGAALDAGNRRRLDVPEARGPVFITIEA
Specific function: Unknown
COG id: COG3664
COG function: function code G; Beta-xylosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48827; Mature: 48827
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSTPNPRRRLLVALAGTMLTAPGLPRAATRIVLDAARTNADATRGYIDLPGFAASRKN CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCC TGIAVHAIDDTSLLDAVKDAGFSFVRADLFWEAVDTPHGWDFSRYDTLVAELSERGLGAL CCEEEEEECCHHHHHHHHHCCCHHEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEE FILGGIHRVHSPNRPPTTPAQLAAFRRYVFNAAQRYKGKPVRFEVWNEQDHKTYWHGEPS EEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCCCC PVAYRNVLKLAVQAVKAADPDAIVATGGVQQVNRTFIRAVGDIASPAQPAPDAVSVHPYR CHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCC QTEPETVFADYAALRRDLSSYRRPPQIWATEWSYPSYGYNYVADIGDGHSSVARARQANY CCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHH AVRLLLANWISQIGLTSYYDIRDDGRDRTNMEHNFGLLDADDAPLPAYIAVRRLFAFTAD HHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHH AVRARYFLDPDARYVVLKLSAARATKYALWCYGDGNAISVDLSRLPAGATVTNMYGAALD HHHEEEEECCCCCEEEEEEECCCCEEEEEEEEECCCEEEEEHHHCCCCCCHHHHHHHHCC AGNRRRLDVPEARGPVFITIEA CCCCCCCCCCCCCCCEEEEEEC >Mature Secondary Structure MKRSTPNPRRRLLVALAGTMLTAPGLPRAATRIVLDAARTNADATRGYIDLPGFAASRKN CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCC TGIAVHAIDDTSLLDAVKDAGFSFVRADLFWEAVDTPHGWDFSRYDTLVAELSERGLGAL CCEEEEEECCHHHHHHHHHCCCHHEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEE FILGGIHRVHSPNRPPTTPAQLAAFRRYVFNAAQRYKGKPVRFEVWNEQDHKTYWHGEPS EEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCCCC PVAYRNVLKLAVQAVKAADPDAIVATGGVQQVNRTFIRAVGDIASPAQPAPDAVSVHPYR CHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCC QTEPETVFADYAALRRDLSSYRRPPQIWATEWSYPSYGYNYVADIGDGHSSVARARQANY CCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHH AVRLLLANWISQIGLTSYYDIRDDGRDRTNMEHNFGLLDADDAPLPAYIAVRRLFAFTAD HHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHH AVRARYFLDPDARYVVLKLSAARATKYALWCYGDGNAISVDLSRLPAGATVTNMYGAALD HHHEEEEECCCCCEEEEEEECCCCEEEEEEEEECCCEEEEEHHHCCCCCCHHHHHHHHCC AGNRRRLDVPEARGPVFITIEA CCCCCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA