| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is 76818498
Identifier: 76818498
GI number: 76818498
Start: 127428
End: 128264
Strand: Direct
Name: 76818498
Synonym: BURPS1710b_A0099
Alternate gene names: NA
Gene position: 127428-128264 (Clockwise)
Preceding gene: 76819318
Following gene: 76819292
Centisome position: 4.0
GC content: 66.31
Gene sequence:
>837_bases ATGTTGACTCTGACTTCCAGCCATTCCGCACAAGCGCTTTCACGCCAGCCGTTCGACGGCACCTTGCCGTTGTCCGAAGT GACGCTGCCCATCCGCACGCCCCGCACGATGACCGATGACGAGGTTTCCGGCATGATCGAAACCTTCAATCGCTACGGCT TCGTGATTCTCGATTGCGAATCGTCGGAACGGGACGACCTGCTCGCGCTCAAGACGTGGCTCGGCAACGCCGCGCCTCAC AAGCGCGCGGACGCCGACGGCGTGGTGCCGATCAACGCGTTCGAACCGGTCGCGGGCCATATCGATTCGTCGCACGAAGC GCATCTGCCGCACACCGACGGTGCGTTCTCGGACACGCCCGAGCGGATCATCACGCTGCAATGCGTGCGGCCGTCGCGCA ACGGCGGGCTGTCGACGCTGTCGAGCGCGAAGGCCGCGTACCGCCATGTCGTCGCTTGCTACGGCGACATCACGCCGCTC ACGCGCGCGGATGCGCTGACGATCGAGCGCACGACGCAGAAGAGCACGGCGGCCGTATTCAAGGAGGACGACGACGGCTG GTCGATCAAGTTCCGGATGAACGACGGCGCCGCCACCGCGACGCCCGCGCCCGCCGCCGCCGACATGTACGGCAGCCTCG CGTGCTTTCTGACCGATCCCGAGAACATGCTGCTGTTTCCGCTCGAGCCCGGGCAGATCCTGATCGGCGACAACACCGCG GTCACGCACGGGCGAACCAGCTACCCGCCGCATCAGCGGCGCAACATGCGGCGCCTGAATTTCGACGGGCGCGGCGCGCT CGCGCGCGAACTCGTGTTCGGCTTCAGCGACGACTGA
Upstream 100 bases:
>100_bases TGGAAAGTGAAAGAGAGGCGGGCGGAGACAGCGTCCATTAATAAGCATATCGAAATACCTGGGCGTCAACCGTGTGCAAT CCACGTTTCGAGGGCCGATC
Downstream 100 bases:
>100_bases ACGCGCCATCGGCGCCGCGCGCCGAGTACCGGGCACCGGCCGTGATCGCGTCGCGGCCGCTGCCCACCGCGGCGCGGCGT CGGCGCGCGGCGTCGTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MLTLTSSHSAQALSRQPFDGTLPLSEVTLPIRTPRTMTDDEVSGMIETFNRYGFVILDCESSERDDLLALKTWLGNAAPH KRADADGVVPINAFEPVAGHIDSSHEAHLPHTDGAFSDTPERIITLQCVRPSRNGGLSTLSSAKAAYRHVVACYGDITPL TRADALTIERTTQKSTAAVFKEDDDGWSIKFRMNDGAATATPAPAAADMYGSLACFLTDPENMLLFPLEPGQILIGDNTA VTHGRTSYPPHQRRNMRRLNFDGRGALARELVFGFSDD
Sequences:
>Translated_278_residues MLTLTSSHSAQALSRQPFDGTLPLSEVTLPIRTPRTMTDDEVSGMIETFNRYGFVILDCESSERDDLLALKTWLGNAAPH KRADADGVVPINAFEPVAGHIDSSHEAHLPHTDGAFSDTPERIITLQCVRPSRNGGLSTLSSAKAAYRHVVACYGDITPL TRADALTIERTTQKSTAAVFKEDDDGWSIKFRMNDGAATATPAPAAADMYGSLACFLTDPENMLLFPLEPGQILIGDNTA VTHGRTSYPPHQRRNMRRLNFDGRGALARELVFGFSDD >Mature_278_residues MLTLTSSHSAQALSRQPFDGTLPLSEVTLPIRTPRTMTDDEVSGMIETFNRYGFVILDCESSERDDLLALKTWLGNAAPH KRADADGVVPINAFEPVAGHIDSSHEAHLPHTDGAFSDTPERIITLQCVRPSRNGGLSTLSSAKAAYRHVVACYGDITPL TRADALTIERTTQKSTAAVFKEDDDGWSIKFRMNDGAATATPAPAAADMYGSLACFLTDPENMLLFPLEPGQILIGDNTA VTHGRTSYPPHQRRNMRRLNFDGRGALARELVFGFSDD
Specific function: Unknown
COG id: COG2175
COG function: function code Q; Probable taurine catabolism dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30275; Mature: 30275
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLTSSHSAQALSRQPFDGTLPLSEVTLPIRTPRTMTDDEVSGMIETFNRYGFVILDCE CEEECCCCCHHHHHCCCCCCCCCHHHEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEECC SSERDDLLALKTWLGNAAPHKRADADGVVPINAFEPVAGHIDSSHEAHLPHTDGAFSDTP CCCCCCEEHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ERIITLQCVRPSRNGGLSTLSSAKAAYRHVVACYGDITPLTRADALTIERTTQKSTAAVF CEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEE KEDDDGWSIKFRMNDGAATATPAPAAADMYGSLACFLTDPENMLLFPLEPGQILIGDNTA EECCCCEEEEEEECCCCCCCCCCCCHHHCCCCEEEEEECCCCEEEEEECCCEEEECCCEE VTHGRTSYPPHQRRNMRRLNFDGRGALARELVFGFSDD EECCCCCCCCHHHCCCEECCCCCCCHHHHHHHCCCCCC >Mature Secondary Structure MLTLTSSHSAQALSRQPFDGTLPLSEVTLPIRTPRTMTDDEVSGMIETFNRYGFVILDCE CEEECCCCCHHHHHCCCCCCCCCHHHEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEECC SSERDDLLALKTWLGNAAPHKRADADGVVPINAFEPVAGHIDSSHEAHLPHTDGAFSDTP CCCCCCEEHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ERIITLQCVRPSRNGGLSTLSSAKAAYRHVVACYGDITPLTRADALTIERTTQKSTAAVF CEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEE KEDDDGWSIKFRMNDGAATATPAPAAADMYGSLACFLTDPENMLLFPLEPGQILIGDNTA EECCCCEEEEEEECCCCCCCCCCCCHHHCCCCEEEEEECCCCEEEEEECCCEEEECCCEE VTHGRTSYPPHQRRNMRRLNFDGRGALARELVFGFSDD EECCCCCCCCHHHCCCEECCCCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA