| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is 76818495
Identifier: 76818495
GI number: 76818495
Start: 2079932
End: 2082259
Strand: Direct
Name: 76818495
Synonym: BURPS1710b_A1703
Alternate gene names: NA
Gene position: 2079932-2082259 (Clockwise)
Preceding gene: 76819067
Following gene: 76819210
Centisome position: 65.37
GC content: 67.4
Gene sequence:
>2328_bases ATGCCGAATTTTTCCGCCGCCCGCACCGTGACGGTGAGCGGCCCTGCCGTGCCGACGACGCCCGTCGGCGAGCCCGCGCT CGAACTGAGCGCGATCCGGGGCGACGAAACGCTATCGGAGATCTATTCGTACACGCTCGATTGCCTGACGCCGCCGGACC CGTTGCTCGCGCACGAGCGGGCCGCGAATCTCGATCTGAAGGCGATGATCGGCAAGGCGCTGACCGTGACCGTGCAGCTC GAAGGCATGGGCTCGTTCGTGCCCGGCATGCCGGGCATGGCGGGCGCGGCCAATATCGGCGCGGGCGCGCGCGAGATCAG CGGCATCGTGACCGGCGCGCGCTTCGAGGGCCAACTGAACCGGCAGTGCCGCTACCGGCTGACGATGCGGCCGTGGATCT ACCTGGCCGACCTGCGCTCGGACTACCGGATTTTCCAGAACCGGAGCGTCGACGAGATCGTCGACGAAGTGCTGAACGCG TATTCGTACTCGTACGACAAGCGCTTGAGCGGCCGGTATCCGAAGCTCGGCTACCAGGTGCAGTACGGCGAGACCGATTT CGCGTTCATCCAGCGGCTGATGCAGGAGCACGGCATCTACTGGTTTTTCGAGCATACGAACCAGGTGCACCGGATGGTGC TCGTCGATCACCTGGGCGCGCACAAGCCGGTGGAGAGCGCCGCATACCGCACGCTGCGCTACTACCCGCCGGGGCACAAG ATCGACGCCGAGTACATCGACAGGTTCAGCACCGAGGAGCACATCCGGCCGGGCCGCTGGGCGACGGGCGATTTCGATTT CGAGAAGCCGAACGCGGACCTGGGCGTCGAGAACGCGCTGCCGCGGGACACCGCGCACAACGGGCTCGAACGTTACGAGT GGCCGGGCGACTACACGGCGCGCGAGCACGGCGAGCACCTCGCGCGCGTGCGCATGGAACAGACGCGCGCGCGGGGCGAG CGCGCATCGGGCGGCGGCAACGTGCGCGACATCGTGTGCGGCACGACATTCGCGCTCGCGGGCCATCCGCACGCGAGCGC GAACCGCGAGTATCTGGTGATCGGCGCGACGTTCGAGGCGACGGAGACGGGCGGCGCGTCGGGGCCGGGCGCATATCGGA TCGACACGTCGTTCGTCGCGCAGCCGGCGACCACCGCGTTCCGGCCGCCGCGCACGGTGCGCAAGCCGCGCACGCGCGGG CCGCAGACGGCGATCGTCACCGGCCCGCGAGGGCAGGACATCTGGACGGACCAGTACGGCCGTGTGAAGCTGAAATTCCA CTGGGACCGTTCGCTCGTCGACGATCAGAACTCGTCGTGCTGGGTGCGCGTTTCCTATGCGTGGTCGGGCAACAATTACG GCGGCGTCAATATTCCGCGCGTGGGCTCCGAAGTGGTCGTCGATTTCGAGCACGGCGACCCGGACCGGCCGCTCGTGACG GGGCAGGTATACAACGCGCTGCACATGCCGCCGTGGCCGTTGCCGGAGAACGCGACGCAAAGCGGCTTCATGACGCGCTC GCCCGCGGGCGGCGGCGAGAACGCGAACATGCTGCGCTTCGAGGACAAGGCGGGCGAGGAGCAGGTCAAGCTGCATGCGG AGCGCAATTACGACGTATCGGTCGAGCGCGACGCGACGACTGCCGTCGGGCGCAAGCACCTGACGCTCGTCGGCGTCGAC CTGATGCCGGTGATGTCGACGCGCTCGCCGCTGGAGCGGCTGATCGACCTGCTGCGCACGGGCGGCGCGGCCAGCCCGGC GGCGTCGGGGCAGCCGGCGGCGGCTTCCCGGCAACCGTCGGGACAGCAGCAGCAACATCAACAGCAACACCAGCAACATC AGCGGCAACACCAGCCCTATCAGCAGTTGAAGCAGCAGCGCCAGATGCAGCGCGCGGGCGGATGGCAGGCGCTCGCGGCG AACGTCGCGAAGACGTTGCAGGAAATCGTGGCGGTGCTCACGGACCCGTTCGTCACCGCGTCGGTGAGCACCGTGCAGGG CGCGTCGACGTCCGTCGTGTTCGGCGACGCGAAGGGCGTGCACGTGGGCGATACCGTCAAGATCACCAGCGGAGACGCGC ATTCGGAGGTCAACGGCACGGCATCGTCGAAGGACGTGAACAGTGTCTCGCTGAAGGGCACGTCGACCAGCCTGACCGGG GTGAGCACCTCCGAAACGGGGACGAACATCGTGACGACCGGACTCACGGTATCAACGACCGGCGCGAGCGTTTCGACGAC CGGATTCAGTGCGACCGAAACGCTCGTGCAGGTCGCCAAGAAGACGCAGGAATGCGAATTCATCAAGGGCATCAAGATCT CGATGTGA
Upstream 100 bases:
>100_bases TCGCGCTGTGGAGCGCGGACGAAACCTGAGCGCGGCCGGCGCGCGAGATGCGCGCGCTTGGGGGCTTCATCGGTTCACAC CGTTTGTGGAGAGATCAGTC
Downstream 100 bases:
>100_bases ACGCACGCTCGCGCGAACGCCACTACACCCCATGAAAATCGTCAAACCGCTTGCCATCAGCCCGCTGACCCGCGTGTACC GGATGCACGGCCGGGAGTAT
Product: Rhs element Vgr protein
Products: NA
Alternate protein names: Rhs Element Vgr Protein; Rhs-Family Protein; Rhs Family Protein; VgrG Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; Vgr Protein; VgrG Family T6SS G; Replication/Virulence Associated Protein; Conserved Hypothethical Protein; Rhs Element Vgr Family; Vgr-Related Protein; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; VrgG Protein; Rhs Protein; Rhs/Vgr-Family Protein; RHS Accessory Genetic Element; Vgr Family Type VI Secretion System
Number of amino acids: Translated: 775; Mature: 774
Protein sequence:
>775_residues MPNFSAARTVTVSGPAVPTTPVGEPALELSAIRGDETLSEIYSYTLDCLTPPDPLLAHERAANLDLKAMIGKALTVTVQL EGMGSFVPGMPGMAGAANIGAGAREISGIVTGARFEGQLNRQCRYRLTMRPWIYLADLRSDYRIFQNRSVDEIVDEVLNA YSYSYDKRLSGRYPKLGYQVQYGETDFAFIQRLMQEHGIYWFFEHTNQVHRMVLVDHLGAHKPVESAAYRTLRYYPPGHK IDAEYIDRFSTEEHIRPGRWATGDFDFEKPNADLGVENALPRDTAHNGLERYEWPGDYTAREHGEHLARVRMEQTRARGE RASGGGNVRDIVCGTTFALAGHPHASANREYLVIGATFEATETGGASGPGAYRIDTSFVAQPATTAFRPPRTVRKPRTRG PQTAIVTGPRGQDIWTDQYGRVKLKFHWDRSLVDDQNSSCWVRVSYAWSGNNYGGVNIPRVGSEVVVDFEHGDPDRPLVT GQVYNALHMPPWPLPENATQSGFMTRSPAGGGENANMLRFEDKAGEEQVKLHAERNYDVSVERDATTAVGRKHLTLVGVD LMPVMSTRSPLERLIDLLRTGGAASPAASGQPAAASRQPSGQQQQHQQQHQQHQRQHQPYQQLKQQRQMQRAGGWQALAA NVAKTLQEIVAVLTDPFVTASVSTVQGASTSVVFGDAKGVHVGDTVKITSGDAHSEVNGTASSKDVNSVSLKGTSTSLTG VSTSETGTNIVTTGLTVSTTGASVSTTGFSATETLVQVAKKTQECEFIKGIKISM
Sequences:
>Translated_775_residues MPNFSAARTVTVSGPAVPTTPVGEPALELSAIRGDETLSEIYSYTLDCLTPPDPLLAHERAANLDLKAMIGKALTVTVQL EGMGSFVPGMPGMAGAANIGAGAREISGIVTGARFEGQLNRQCRYRLTMRPWIYLADLRSDYRIFQNRSVDEIVDEVLNA YSYSYDKRLSGRYPKLGYQVQYGETDFAFIQRLMQEHGIYWFFEHTNQVHRMVLVDHLGAHKPVESAAYRTLRYYPPGHK IDAEYIDRFSTEEHIRPGRWATGDFDFEKPNADLGVENALPRDTAHNGLERYEWPGDYTAREHGEHLARVRMEQTRARGE RASGGGNVRDIVCGTTFALAGHPHASANREYLVIGATFEATETGGASGPGAYRIDTSFVAQPATTAFRPPRTVRKPRTRG PQTAIVTGPRGQDIWTDQYGRVKLKFHWDRSLVDDQNSSCWVRVSYAWSGNNYGGVNIPRVGSEVVVDFEHGDPDRPLVT GQVYNALHMPPWPLPENATQSGFMTRSPAGGGENANMLRFEDKAGEEQVKLHAERNYDVSVERDATTAVGRKHLTLVGVD LMPVMSTRSPLERLIDLLRTGGAASPAASGQPAAASRQPSGQQQQHQQQHQQHQRQHQPYQQLKQQRQMQRAGGWQALAA NVAKTLQEIVAVLTDPFVTASVSTVQGASTSVVFGDAKGVHVGDTVKITSGDAHSEVNGTASSKDVNSVSLKGTSTSLTG VSTSETGTNIVTTGLTVSTTGASVSTTGFSATETLVQVAKKTQECEFIKGIKISM >Mature_774_residues PNFSAARTVTVSGPAVPTTPVGEPALELSAIRGDETLSEIYSYTLDCLTPPDPLLAHERAANLDLKAMIGKALTVTVQLE GMGSFVPGMPGMAGAANIGAGAREISGIVTGARFEGQLNRQCRYRLTMRPWIYLADLRSDYRIFQNRSVDEIVDEVLNAY SYSYDKRLSGRYPKLGYQVQYGETDFAFIQRLMQEHGIYWFFEHTNQVHRMVLVDHLGAHKPVESAAYRTLRYYPPGHKI DAEYIDRFSTEEHIRPGRWATGDFDFEKPNADLGVENALPRDTAHNGLERYEWPGDYTAREHGEHLARVRMEQTRARGER ASGGGNVRDIVCGTTFALAGHPHASANREYLVIGATFEATETGGASGPGAYRIDTSFVAQPATTAFRPPRTVRKPRTRGP QTAIVTGPRGQDIWTDQYGRVKLKFHWDRSLVDDQNSSCWVRVSYAWSGNNYGGVNIPRVGSEVVVDFEHGDPDRPLVTG QVYNALHMPPWPLPENATQSGFMTRSPAGGGENANMLRFEDKAGEEQVKLHAERNYDVSVERDATTAVGRKHLTLVGVDL MPVMSTRSPLERLIDLLRTGGAASPAASGQPAAASRQPSGQQQQHQQQHQQHQRQHQPYQQLKQQRQMQRAGGWQALAAN VAKTLQEIVAVLTDPFVTASVSTVQGASTSVVFGDAKGVHVGDTVKITSGDAHSEVNGTASSKDVNSVSLKGTSTSLTGV STSETGTNIVTTGLTVSTTGASVSTTGFSATETLVQVAKKTQECEFIKGIKISM
Specific function: Unknown
COG id: COG3501
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84661; Mature: 84529
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNFSAARTVTVSGPAVPTTPVGEPALELSAIRGDETLSEIYSYTLDCLTPPDPLLAHER CCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHH AANLDLKAMIGKALTVTVQLEGMGSFVPGMPGMAGAANIGAGAREISGIVTGARFEGQLN HCCCCHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHEECCEECCCCC RQCRYRLTMRPWIYLADLRSDYRIFQNRSVDEIVDEVLNAYSYSYDKRLSGRYPKLGYQV CCEEEEEEECCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEE QYGETDFAFIQRLMQEHGIYWFFEHTNQVHRMVLVDHLGAHKPVESAAYRTLRYYPPGHK EECCCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHEEEECCCCCC IDAEYIDRFSTEEHIRPGRWATGDFDFEKPNADLGVENALPRDTAHNGLERYEWPGDYTA CCHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHCCCCCCCCH REHGEHLARVRMEQTRARGERASGGGNVRDIVCGTTFALAGHPHASANREYLVIGATFEA HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCEEEEEEEEEC TETGGASGPGAYRIDTSFVAQPATTAFRPPRTVRKPRTRGPQTAIVTGPRGQDIWTDQYG CCCCCCCCCCCEEECHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCC RVKLKFHWDRSLVDDQNSSCWVRVSYAWSGNNYGGVNIPRVGSEVVVDFEHGDPDRPLVT EEEEEEEECCHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCEEE GQVYNALHMPPWPLPENATQSGFMTRSPAGGGENANMLRFEDKAGEEQVKLHAERNYDVS HHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCEE VERDATTAVGRKHLTLVGVDLMPVMSTRSPLERLIDLLRTGGAASPAASGQPAAASRQPS EECCCHHHHCCCEEEEEECCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC GQQQQHQQQHQQHQRQHQPYQQLKQQRQMQRAGGWQALAANVAKTLQEIVAVLTDPFVTA CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEE SVSTVQGASTSVVFGDAKGVHVGDTVKITSGDAHSEVNGTASSKDVNSVSLKGTSTSLTG EEHHCCCCCEEEEEECCCCEECCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCEECC VSTSETGTNIVTTGLTVSTTGASVSTTGFSATETLVQVAKKTQECEFIKGIKISM CCCCCCCCEEEEECEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHCCEEECC >Mature Secondary Structure PNFSAARTVTVSGPAVPTTPVGEPALELSAIRGDETLSEIYSYTLDCLTPPDPLLAHER CCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHH AANLDLKAMIGKALTVTVQLEGMGSFVPGMPGMAGAANIGAGAREISGIVTGARFEGQLN HCCCCHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHEECCEECCCCC RQCRYRLTMRPWIYLADLRSDYRIFQNRSVDEIVDEVLNAYSYSYDKRLSGRYPKLGYQV CCEEEEEEECCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEE QYGETDFAFIQRLMQEHGIYWFFEHTNQVHRMVLVDHLGAHKPVESAAYRTLRYYPPGHK EECCCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHEEEECCCCCC IDAEYIDRFSTEEHIRPGRWATGDFDFEKPNADLGVENALPRDTAHNGLERYEWPGDYTA CCHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHCCCCCCCCH REHGEHLARVRMEQTRARGERASGGGNVRDIVCGTTFALAGHPHASANREYLVIGATFEA HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCEEEEEEEEEC TETGGASGPGAYRIDTSFVAQPATTAFRPPRTVRKPRTRGPQTAIVTGPRGQDIWTDQYG CCCCCCCCCCCEEECHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCC RVKLKFHWDRSLVDDQNSSCWVRVSYAWSGNNYGGVNIPRVGSEVVVDFEHGDPDRPLVT EEEEEEEECCHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCEEE GQVYNALHMPPWPLPENATQSGFMTRSPAGGGENANMLRFEDKAGEEQVKLHAERNYDVS HHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCEE VERDATTAVGRKHLTLVGVDLMPVMSTRSPLERLIDLLRTGGAASPAASGQPAAASRQPS EECCCHHHHCCCEEEEEECCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC GQQQQHQQQHQQHQRQHQPYQQLKQQRQMQRAGGWQALAANVAKTLQEIVAVLTDPFVTA CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEE SVSTVQGASTSVVFGDAKGVHVGDTVKITSGDAHSEVNGTASSKDVNSVSLKGTSTSLTG EEHHCCCCCEEEEEECCCCEECCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCEECC VSTSETGTNIVTTGLTVSTTGASVSTTGFSATETLVQVAKKTQECEFIKGIKISM CCCCCCCCEEEEECEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA