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The map label for this gene is bkdR [H]

Identifier: 76818463

GI number: 76818463

Start: 802905

End: 803429

Strand: Direct

Name: bkdR [H]

Synonym: BURPS1710b_A0611

Alternate gene names: 76818463

Gene position: 802905-803429 (Clockwise)

Preceding gene: 76819577

Following gene: 76818630

Centisome position: 25.23

GC content: 63.43

Gene sequence:

>525_bases
ATGCACCAAACTGATTGGAATACACTAATAGAAACCGATTTCTTAGAGCTTTCCCACAACATGATCGAACTCGACAAAAC
CGACCGCGCCATTCTCGCCGCAGTGCAGCTCGACGGCCGCATCCCGGTCGCCCGCCTCGCCGATTCGGTGGGCCTGAGCG
AAACGCCGTGCGCGCGCCGGCTCAAACGCCTCGAAAGCGACGGCTACATCGAACGCTATCGCGCGCAGCTCTCGCGCAAC
GCGCTTGGCTTCGGCGTCGTCGCGTTCGTGCTGCTGCGCTGCTCGGTTCACGATCGCAGCGTCGCGAACCGCTTCGAGCG
CGAGGTGCTCGGCATTCCGCGCATCCTGTCGTGCCACAACGTGTCGGGGTCCGCCGACTATCTGCTGCAAGTGGTCGCGC
ACGATCTCGACGACTACGGCACATTCCTGCGCGAGACGCTGCGCGTGCTGCCCGGCGTCACGTCGATCGAATCGGCGCTA
TCGCTGCGCGAGGTGAAACGCGAGGCCGAACTGCCGATTCCGTGA

Upstream 100 bases:

>100_bases
GACGAGCAGCAGATGAGCGGAAAACATGATCGAACCCGAGTGGAAAGGGCTCCATGTTGCACCCGCTCGACGAGCGCTTT
TTGGCTAATTTGGCCGACCG

Downstream 100 bases:

>100_bases
ACGACGCCGCGAACGGCTCCGTCGCCGCATCCGCGGCTGCCCATGGCGCGGGTGGGCCGGCTGCGGCCGGCCCTGTGTCC
TCCGCGTCCTCCGCGTCCTG

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MHQTDWNTLIETDFLELSHNMIELDKTDRAILAAVQLDGRIPVARLADSVGLSETPCARRLKRLESDGYIERYRAQLSRN
ALGFGVVAFVLLRCSVHDRSVANRFEREVLGIPRILSCHNVSGSADYLLQVVAHDLDDYGTFLRETLRVLPGVTSIESAL
SLREVKREAELPIP

Sequences:

>Translated_174_residues
MHQTDWNTLIETDFLELSHNMIELDKTDRAILAAVQLDGRIPVARLADSVGLSETPCARRLKRLESDGYIERYRAQLSRN
ALGFGVVAFVLLRCSVHDRSVANRFEREVLGIPRILSCHNVSGSADYLLQVVAHDLDDYGTFLRETLRVLPGVTSIESAL
SLREVKREAELPIP
>Mature_174_residues
MHQTDWNTLIETDFLELSHNMIELDKTDRAILAAVQLDGRIPVARLADSVGLSETPCARRLKRLESDGYIERYRAQLSRN
ALGFGVVAFVLLRCSVHDRSVANRFEREVLGIPRILSCHNVSGSADYLLQVVAHDLDDYGTFLRETLRVLPGVTSIESAL
SLREVKREAELPIP

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=35.3333333333333, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1787116, Length=151, Percent_Identity=39.0728476821192, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 19556; Mature: 19556

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQTDWNTLIETDFLELSHNMIELDKTDRAILAAVQLDGRIPVARLADSVGLSETPCARR
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHH
LKRLESDGYIERYRAQLSRNALGFGVVAFVLLRCSVHDRSVANRFEREVLGIPRILSCHN
HHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHCC
VSGSADYLLQVVAHDLDDYGTFLRETLRVLPGVTSIESALSLREVKREAELPIP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MHQTDWNTLIETDFLELSHNMIELDKTDRAILAAVQLDGRIPVARLADSVGLSETPCARR
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHH
LKRLESDGYIERYRAQLSRNALGFGVVAFVLLRCSVHDRSVANRFEREVLGIPRILSCHN
HHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHCC
VSGSADYLLQVVAHDLDDYGTFLRETLRVLPGVTSIESALSLREVKREAELPIP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]