| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is 76818415
Identifier: 76818415
GI number: 76818415
Start: 336673
End: 338646
Strand: Direct
Name: 76818415
Synonym: BURPS1710b_A0222
Alternate gene names: NA
Gene position: 336673-338646 (Clockwise)
Preceding gene: 76819136
Following gene: 76817996
Centisome position: 10.58
GC content: 68.39
Gene sequence:
>1974_bases ATGATCCACATTCGCTTGAAACGGGCCTCGTTCCTGTTGCTGCTCGGCGCGCAGGCCGTGAGCCTCGGCGCCGCGGCCGG CACGCTGTCGGGCACCGTCTCGTCGGCCGGCACGCCGCTCGCCGGCGCGATGGTCACCGTGTTCGACGCCGCGCAGGCGC GCCGCGACACCGTCTACACCGACCACAACGGCCGCTACCGCATCACCGTCGATTTCGCGGGCGAACTGCGCGTGCGGGCG CGCACGCCGTATTTCAAGGACGCCGCGCAAGACCTCGCGCTCGCGCCCGACGCGAGCAAGACGCTCGACTTCTCGCTCGC GCGGCAGACGGTGGCCGACGAGCTGTCCGCGAGCCTGCCCGCGTCCGCGCACCTGGCCACGCTGCCGTGGAGCAGCCAGG ACTCGCGCACGGCCTTCATCAGCCAGTGCAACTACTGTCACCAGGTCGGCAACGCGCTCACGCGCACGCCGCGCGACGAG GCCGCCTGGGGCGCGACCGTGCGCCGGATGGAGGGCTACGCGGCGCTGCTCACGGACCGGCAGGCGCGCGACATCACGCA CACGCTCTATCAGGGAATGAACGCTCACGCGGTCGCGGCGGTGGAGAAATACCTGTACGACGATCGGCTCGCGCCCGCGA AGATCCGGGAATGGGCGGCGGGCGACGGCCTCACGTTCATCCACGATGCGGACGTCGGCTTCGACGATCACCTGTACGGT GCCGACGAAGGCCACGACAAGATCTGGGAACTCGACCGCAAGACCGGCAAGCTCACCGAATGGAAGGAGCCCGACGTCGA TCTGCCGGTGGGCGGCATCTTCTCCGGCGTGCAGTTGCCGATCGGCGTGTTCAGCGGCAAGCACGGGCCGCACAGCCTCG CGCAGGCGCCCGACGGCCGGTTCTGGATCACCAACGCGCTATCCTCGACGCTCGCTTCGTTCGATCCGGCGACAAAGCGC TTCAAGCTCTACGAGCTCGGCCACTCGCACCTGTATCCGCACACGTTGCGCATCGACCGCGCGGGCATCGTCTGGTTCAC GATCGTCGCGTCCAACGAGGTCGCGCGCTTCGATCCGAAAACCGGGCGGTTCACGATCATCCATCTGCCCGACGGCGGCA TCTGGCGCGCGATGTCGCATTATCTGTTTCCGCTCGTCGTGAAAATGGCCGCGTGGTTCCCGGGCCAGAACCTGCACCTC GCGCTCACGCATCACAAGTGGGCGTTCCAGGGCCGCGACGCGTTCCCGTTCCCGTACGGGATCGACGTGAATCCGGTCGA CGGCTCGATCTGGTACGCAAAGCTCTATGCGAACAAGATCGGCCGCATCGATCCGAAGACACTCGCGGTGACCGAATTCG ACACGCCGCTCGGCGGCCCGCGGCGGCTGCGCTTCGATCCGCAGGGCAATCTGTGGATCCCGGCGTTCGACGACGGCGGG CTGATGAGATTCGATACGCGCACGCACCGCTTCGAGACCTTCAAGCTGCCGCTTCTCGCGCACAACGAATACGAGGTGCC GTATGCGCTGAACGTGCAGCCGAAGACGGGCGACATCTGGATCACGTCGAACATGTCCGACCGGATCTTCCGCTTCGTGC CGAGCACGCAGACCTTCATCACGTACCCGCTGCCGACGCGCGTCACGTGGCTGCGCGACATGACGTTCACGCAGGACGGC GCGGTGTGCTCGAGCTCGTCGAACCTGCCCGCGTACGGGATCGAAGGCGGACGGGCGTCGTTCATCTGCCTGTATCCGGA CGGCGAACGCGGCGGCACGGCGGCGAACGCGGCCGGCAACGCCAACGCGGCCGCGAACCTCGCGCGGGTCCGCGCCGCGG CCGCGCGCAGGACGCCGGAGCGCACCGCGCCGGCTCGCGCCGCGCTCGCCCGCGCCGGCTCGAACCGGGACGGCGCCATC CAGACCGCGGCCATTCAAGCCGACGGCACACGCACCGATCGTTCGGCACACTAA
Upstream 100 bases:
>100_bases GCCCGCCCCCGCCTGAAGCGAGCCGCTCGAACGCGCGGCGCGAACGCCGCCGCTCGAGCGGCTCCGTTCATCGATTTCGT TTGCCAACATCACGTCACCC
Downstream 100 bases:
>100_bases GCGAGACTGCGTCATGAACATGCAAACTTTCCTGCTGTATCTGCTCATCACGGTGCTGATGGCGCCGCTGCTGGCCGTCT ACGGGCTGCCGTTCATCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase Transmembrane Protein; Streptogramin Lyase-Related Protein; Streptogramin Lyase-Related; SMP-30/Gluconolaconase/LRE Domain Protein; Twin-Arginine Translocation Pathway Signal; Virginiamycin B Hydrolase Vgb; Streptogramin Lyase-Like Protein; Copper Resistance D Domain-Containing Protein; Hydrolase; Streptogramin Lyase Gluconolactonase Family; SMP-30/Gluconolaconase/LRE Domain-Containing Protein
Number of amino acids: Translated: 657; Mature: 657
Protein sequence:
>657_residues MIHIRLKRASFLLLLGAQAVSLGAAAGTLSGTVSSAGTPLAGAMVTVFDAAQARRDTVYTDHNGRYRITVDFAGELRVRA RTPYFKDAAQDLALAPDASKTLDFSLARQTVADELSASLPASAHLATLPWSSQDSRTAFISQCNYCHQVGNALTRTPRDE AAWGATVRRMEGYAALLTDRQARDITHTLYQGMNAHAVAAVEKYLYDDRLAPAKIREWAAGDGLTFIHDADVGFDDHLYG ADEGHDKIWELDRKTGKLTEWKEPDVDLPVGGIFSGVQLPIGVFSGKHGPHSLAQAPDGRFWITNALSSTLASFDPATKR FKLYELGHSHLYPHTLRIDRAGIVWFTIVASNEVARFDPKTGRFTIIHLPDGGIWRAMSHYLFPLVVKMAAWFPGQNLHL ALTHHKWAFQGRDAFPFPYGIDVNPVDGSIWYAKLYANKIGRIDPKTLAVTEFDTPLGGPRRLRFDPQGNLWIPAFDDGG LMRFDTRTHRFETFKLPLLAHNEYEVPYALNVQPKTGDIWITSNMSDRIFRFVPSTQTFITYPLPTRVTWLRDMTFTQDG AVCSSSSNLPAYGIEGGRASFICLYPDGERGGTAANAAGNANAAANLARVRAAAARRTPERTAPARAALARAGSNRDGAI QTAAIQADGTRTDRSAH
Sequences:
>Translated_657_residues MIHIRLKRASFLLLLGAQAVSLGAAAGTLSGTVSSAGTPLAGAMVTVFDAAQARRDTVYTDHNGRYRITVDFAGELRVRA RTPYFKDAAQDLALAPDASKTLDFSLARQTVADELSASLPASAHLATLPWSSQDSRTAFISQCNYCHQVGNALTRTPRDE AAWGATVRRMEGYAALLTDRQARDITHTLYQGMNAHAVAAVEKYLYDDRLAPAKIREWAAGDGLTFIHDADVGFDDHLYG ADEGHDKIWELDRKTGKLTEWKEPDVDLPVGGIFSGVQLPIGVFSGKHGPHSLAQAPDGRFWITNALSSTLASFDPATKR FKLYELGHSHLYPHTLRIDRAGIVWFTIVASNEVARFDPKTGRFTIIHLPDGGIWRAMSHYLFPLVVKMAAWFPGQNLHL ALTHHKWAFQGRDAFPFPYGIDVNPVDGSIWYAKLYANKIGRIDPKTLAVTEFDTPLGGPRRLRFDPQGNLWIPAFDDGG LMRFDTRTHRFETFKLPLLAHNEYEVPYALNVQPKTGDIWITSNMSDRIFRFVPSTQTFITYPLPTRVTWLRDMTFTQDG AVCSSSSNLPAYGIEGGRASFICLYPDGERGGTAANAAGNANAAANLARVRAAAARRTPERTAPARAALARAGSNRDGAI QTAAIQADGTRTDRSAH >Mature_657_residues MIHIRLKRASFLLLLGAQAVSLGAAAGTLSGTVSSAGTPLAGAMVTVFDAAQARRDTVYTDHNGRYRITVDFAGELRVRA RTPYFKDAAQDLALAPDASKTLDFSLARQTVADELSASLPASAHLATLPWSSQDSRTAFISQCNYCHQVGNALTRTPRDE AAWGATVRRMEGYAALLTDRQARDITHTLYQGMNAHAVAAVEKYLYDDRLAPAKIREWAAGDGLTFIHDADVGFDDHLYG ADEGHDKIWELDRKTGKLTEWKEPDVDLPVGGIFSGVQLPIGVFSGKHGPHSLAQAPDGRFWITNALSSTLASFDPATKR FKLYELGHSHLYPHTLRIDRAGIVWFTIVASNEVARFDPKTGRFTIIHLPDGGIWRAMSHYLFPLVVKMAAWFPGQNLHL ALTHHKWAFQGRDAFPFPYGIDVNPVDGSIWYAKLYANKIGRIDPKTLAVTEFDTPLGGPRRLRFDPQGNLWIPAFDDGG LMRFDTRTHRFETFKLPLLAHNEYEVPYALNVQPKTGDIWITSNMSDRIFRFVPSTQTFITYPLPTRVTWLRDMTFTQDG AVCSSSSNLPAYGIEGGRASFICLYPDGERGGTAANAAGNANAAANLARVRAAAARRTPERTAPARAALARAGSNRDGAI QTAAIQADGTRTDRSAH
Specific function: Unknown
COG id: COG4257
COG function: function code V; Streptogramin lyase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72110; Mature: 72110
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHIRLKRASFLLLLGAQAVSLGAAAGTLSGTVSSAGTPLAGAMVTVFDAAQARRDTVYT CEEEEEECCEEEEEECCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEE DHNGRYRITVDFAGELRVRARTPYFKDAAQDLALAPDASKTLDFSLARQTVADELSASLP CCCCEEEEEEEECCCEEEEECCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCC ASAHLATLPWSSQDSRTAFISQCNYCHQVGNALTRTPRDEAAWGATVRRMEGYAALLTDR CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEECCC QARDITHTLYQGMNAHAVAAVEKYLYDDRLAPAKIREWAAGDGLTFIHDADVGFDDHLYG HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCC ADEGHDKIWELDRKTGKLTEWKEPDVDLPVGGIFSGVQLPIGVFSGKHGPHSLAQAPDGR CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEECCCCCCCHHHCCCCCC FWITNALSSTLASFDPATKRFKLYELGHSHLYPHTLRIDRAGIVWFTIVASNEVARFDPK EEEHHHHHHHHHHCCCHHHEEEEEECCCCCCCCEEEEEECCCEEEEEEEECCCEEECCCC TGRFTIIHLPDGGIWRAMSHYLFPLVVKMAAWFPGQNLHLALTHHKWAFQGRDAFPFPYG CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECEEEECCCCCCCCCCC IDVNPVDGSIWYAKLYANKIGRIDPKTLAVTEFDTPLGGPRRLRFDPQGNLWIPAFDDGG CCCCCCCCCEEEEEEEHHHCCCCCCCEEEEEECCCCCCCCEEEEECCCCCEEEEEECCCC LMRFDTRTHRFETFKLPLLAHNEYEVPYALNVQPKTGDIWITSNMSDRIFRFVPSTQTFI EEEEECCCCEEEEEEEEEEECCCCCCCEEEEECCCCCCEEEECCCCCCCEEECCCCCEEE TYPLPTRVTWLRDMTFTQDGAVCSSSSNLPAYGIEGGRASFICLYPDGERGGTAANAAGN EECCCCCEEEEECCEECCCCCEECCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCC ANAAANLARVRAAAARRTPERTAPARAALARAGSNRDGAIQTAAIQADGTRTDRSAH CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure MIHIRLKRASFLLLLGAQAVSLGAAAGTLSGTVSSAGTPLAGAMVTVFDAAQARRDTVYT CEEEEEECCEEEEEECCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEE DHNGRYRITVDFAGELRVRARTPYFKDAAQDLALAPDASKTLDFSLARQTVADELSASLP CCCCEEEEEEEECCCEEEEECCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCC ASAHLATLPWSSQDSRTAFISQCNYCHQVGNALTRTPRDEAAWGATVRRMEGYAALLTDR CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEECCC QARDITHTLYQGMNAHAVAAVEKYLYDDRLAPAKIREWAAGDGLTFIHDADVGFDDHLYG HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCC ADEGHDKIWELDRKTGKLTEWKEPDVDLPVGGIFSGVQLPIGVFSGKHGPHSLAQAPDGR CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEECCCCCCCHHHCCCCCC FWITNALSSTLASFDPATKRFKLYELGHSHLYPHTLRIDRAGIVWFTIVASNEVARFDPK EEEHHHHHHHHHHCCCHHHEEEEEECCCCCCCCEEEEEECCCEEEEEEEECCCEEECCCC TGRFTIIHLPDGGIWRAMSHYLFPLVVKMAAWFPGQNLHLALTHHKWAFQGRDAFPFPYG CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECEEEECCCCCCCCCCC IDVNPVDGSIWYAKLYANKIGRIDPKTLAVTEFDTPLGGPRRLRFDPQGNLWIPAFDDGG CCCCCCCCCEEEEEEEHHHCCCCCCCEEEEEECCCCCCCCEEEEECCCCCEEEEEECCCC LMRFDTRTHRFETFKLPLLAHNEYEVPYALNVQPKTGDIWITSNMSDRIFRFVPSTQTFI EEEEECCCCEEEEEEEEEEECCCCCCCEEEEECCCCCCEEEECCCCCCCEEECCCCCEEE TYPLPTRVTWLRDMTFTQDGAVCSSSSNLPAYGIEGGRASFICLYPDGERGGTAANAAGN EECCCCCEEEEECCEECCCCCEECCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCC ANAAANLARVRAAAARRTPERTAPARAALARAGSNRDGAIQTAAIQADGTRTDRSAH CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA