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The map label for this gene is rhaR [C]

Identifier: 76818395

GI number: 76818395

Start: 2091747

End: 2092298

Strand: Direct

Name: rhaR [C]

Synonym: BURPS1710b_A1712

Alternate gene names: 76818395

Gene position: 2091747-2092298 (Clockwise)

Preceding gene: 76818980

Following gene: 76819834

Centisome position: 65.74

GC content: 73.01

Gene sequence:

>552_bases
ATGCCGGCGATTACGAGATTCCACAGCTCACGCTGCGGGCCGACATCGCGCCGGGAAGGTCGGGGTTCGCCGCGCATATC
GCGTGACGCGGGGCACGCGTCGGGCGGCCGGCGGCTGGACGACGGCGCCGCGGCGGCGGCCGACGCCGCGCGGCTCGCGG
TGGCGCCGCTCGTGCGCGACGGCGGGCAGGCGCGGTTCATCGCGAGCGAGCCGCCGCAGCGCACGTCGACGCCACATGCA
TTGATGGAATGGCTGCACGGCCATTTGCGCGAGCCGTCGACGCGCGACGCGATCGCCCGGCAGAGCGCGATGAGCGTTCG
CACGCTGGCGCGCCGCTTTCAGGAATGGACCGGCACCTTGCCGTTGCAGTGGCTTCGGCCCGCGCGCGTGCGGCGCGCGC
AGCCATTGCCGCAGACGACGGCGCTGTCTGTCGAGCGGATCGCGACCGAAGCCGGGTTCGGCTTGGCGAGCGCGTTTCGC
GAGCGCTTCGTGCGGATCGTCGGTACGACGCCGAAGCGGTATCGGCAGGCGTTCAGGCTGCAGGCCGGCTGA

Upstream 100 bases:

>100_bases
AACCGCATCGACGAGACGCGCTTCGCGACGATCCGCGATGCGCTCGGGCAGCGCCTCGACACGCTGTGGACGACCGCGCC
GATCGCCTTCCGTGCGCAGA

Downstream 100 bases:

>100_bases
CGGTGGTGCGAAGGCGGGTGACAGGGCGGAGGCGGGCTTGAGGCGAGGCTCGACGAAAGGCTCGGCGAATAGCCGACCAT
CGCATGGCTCGACGCGGGGC

Product: AraC/XylS family transcription factor

Products: NA

Alternate protein names: AraC-Family Transcriptional Regulator; Transcriptional Regulator AraC Family; AraC Family Transcription Regulator; Transcriptional Regulator; Transcriptional Activator FtrA; ADPA Family Transcriptional Regulator; ThiJ/PfpI Domain-Containing Protein; AraC Family Regulatory Protein; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator Arac Family; ADPA-Family Transcriptional Regulator; AraC Family Regulatory Helix-Turn-Helix Protein; AraC Family Regulator; DJ-1/PfpI Family; AraC Family Transcriptional Regulatory Protein; Transcriptional Regulator Protein AraC Family; AraC-Family Protein Transcriptional Regulator; HTH-Type Transcriptional Regulator Glxa; AraC-Like Transcriptional Regulator

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MPAITRFHSSRCGPTSRREGRGSPRISRDAGHASGGRRLDDGAAAAADAARLAVAPLVRDGGQARFIASEPPQRTSTPHA
LMEWLHGHLREPSTRDAIARQSAMSVRTLARRFQEWTGTLPLQWLRPARVRRAQPLPQTTALSVERIATEAGFGLASAFR
ERFVRIVGTTPKRYRQAFRLQAG

Sequences:

>Translated_183_residues
MPAITRFHSSRCGPTSRREGRGSPRISRDAGHASGGRRLDDGAAAAADAARLAVAPLVRDGGQARFIASEPPQRTSTPHA
LMEWLHGHLREPSTRDAIARQSAMSVRTLARRFQEWTGTLPLQWLRPARVRRAQPLPQTTALSVERIATEAGFGLASAFR
ERFVRIVGTTPKRYRQAFRLQAG
>Mature_182_residues
PAITRFHSSRCGPTSRREGRGSPRISRDAGHASGGRRLDDGAAAAADAARLAVAPLVRDGGQARFIASEPPQRTSTPHAL
MEWLHGHLREPSTRDAIARQSAMSVRTLARRFQEWTGTLPLQWLRPARVRRAQPLPQTTALSVERIATEAGFGLASAFRE
RFVRIVGTTPKRYRQAFRLQAG

Specific function: Activator Of The L-Rhamnose Operon. Rhar Putatively Autoregulates Its Synthesis. [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20155; Mature: 20024

Theoretical pI: Translated: 12.39; Mature: 12.39

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAITRFHSSRCGPTSRREGRGSPRISRDAGHASGGRRLDDGAAAAADAARLAVAPLVRD
CCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
GGQARFIASEPPQRTSTPHALMEWLHGHLREPSTRDAIARQSAMSVRTLARRFQEWTGTL
CCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLQWLRPARVRRAQPLPQTTALSVERIATEAGFGLASAFRERFVRIVGTTPKRYRQAFRL
CHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHC
QAG
CCC
>Mature Secondary Structure 
PAITRFHSSRCGPTSRREGRGSPRISRDAGHASGGRRLDDGAAAAADAARLAVAPLVRD
CCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
GGQARFIASEPPQRTSTPHALMEWLHGHLREPSTRDAIARQSAMSVRTLARRFQEWTGTL
CCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLQWLRPARVRRAQPLPQTTALSVERIATEAGFGLASAFRERFVRIVGTTPKRYRQAFRL
CHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHC
QAG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA