| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is 76818316
Identifier: 76818316
GI number: 76818316
Start: 786669
End: 787640
Strand: Direct
Name: 76818316
Synonym: BURPS1710b_A0596
Alternate gene names: NA
Gene position: 786669-787640 (Clockwise)
Preceding gene: 76818768
Following gene: 76818262
Centisome position: 24.72
GC content: 64.61
Gene sequence:
>972_bases ATGGGGCGATTCGCATCGCCTTCGAATGATTTTTCAAACAGTGAGAAACGCCATATTTTGAGCAAGTACCAGATCGACGG CAGTGTCGTATTCGATAGTCAAGCGATGACGCTTTCTCGCGGCGACATCGTCACCACGCTTACCGCCAACGAAACCGAGC TGCTTTGCATCTTGATGCAGGGCACGGCCAGCAAGCAGGCCGTGATCGAGCAAATCTGGGAGAGCAAGGGGCTCTTCGTC ACGGAAGGCAGTTATCACCAGCTCGTGCGCGCGCTGCGCGTGAAGCTCGACGAGCAAGGCATCCCGCCCACGCAAGTGAA GACGCTGCCGCGGCTCGGCCTGCGTTTTCTCGGCTTCGCGGAGCTGCTCGACGCATCGCCGCCTTCGCCGGATGCGCACG CCGCGTCCGCCTCGCCCGCTTCGTCCGAGCCCGAACCCGCCGCCGCGCCGGCCGGCGCACAAGCGGCGCTCGCCGAAGCG ATCGCGCCGAGCGTGCCCATCGCACCGCGCGCATCGAGCGCACCGGATACGGCGAATACAGTCACTGCGCCGATCGCGGC CGCCGCACCGCCGCCATCCGCCGCGCCATCCGCGCCGCCGCCCGGCGCGGCAAGCGCGCCGTTGCCCGCCACGCGCGCCG CGCATGCGCGATCGCCGCGCCGCCGAGCAGCCTATCTCGCGATCTACGTGACGCTCGCGGCGTGGGCGAGCGTGCTCACC TGGCAAACGTTCAGGCATCGCGACAACACCTTCCGGTTCCGCTTCACGCGGACCGTCGACGGCATCCACTACTTCTCCGA CGGCCGCATGAACCAGCCCAACCTGCTGAAAGCCATCGACGTCAAACCGCTCAAGGGCAGCTTCGTCTACGAGATCGAAC TGGGATCGAACGACTGGCTCGCGGTATGTCCGGAATCCATCTACGAAACACCTGAACTGTGCCAAGCCTATTTCTTCGAA AAGAACAACTGA
Upstream 100 bases:
>100_bases GCGCGGCAGCGCGGCTTCCACACGCGCCGCCATCGCTCAGGACTCGAAAAGAAATACGCGCAATACGCAATTCGATGCGT ACTCGCTCGAGTCAGCCCGG
Downstream 100 bases:
>100_bases TCGCGCTGTGCGTGGTGGCGCTGAGCGGATGGACAGCCTGGTACGTCACGGTCGGCGCGTATCGCGACCTGCCGGGCGGC AAATGCGTGATCCGCCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator CadC
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MGRFASPSNDFSNSEKRHILSKYQIDGSVVFDSQAMTLSRGDIVTTLTANETELLCILMQGTASKQAVIEQIWESKGLFV TEGSYHQLVRALRVKLDEQGIPPTQVKTLPRLGLRFLGFAELLDASPPSPDAHAASASPASSEPEPAAAPAGAQAALAEA IAPSVPIAPRASSAPDTANTVTAPIAAAAPPPSAAPSAPPPGAASAPLPATRAAHARSPRRRAAYLAIYVTLAAWASVLT WQTFRHRDNTFRFRFTRTVDGIHYFSDGRMNQPNLLKAIDVKPLKGSFVYEIELGSNDWLAVCPESIYETPELCQAYFFE KNN
Sequences:
>Translated_323_residues MGRFASPSNDFSNSEKRHILSKYQIDGSVVFDSQAMTLSRGDIVTTLTANETELLCILMQGTASKQAVIEQIWESKGLFV TEGSYHQLVRALRVKLDEQGIPPTQVKTLPRLGLRFLGFAELLDASPPSPDAHAASASPASSEPEPAAAPAGAQAALAEA IAPSVPIAPRASSAPDTANTVTAPIAAAAPPPSAAPSAPPPGAASAPLPATRAAHARSPRRRAAYLAIYVTLAAWASVLT WQTFRHRDNTFRFRFTRTVDGIHYFSDGRMNQPNLLKAIDVKPLKGSFVYEIELGSNDWLAVCPESIYETPELCQAYFFE KNN >Mature_322_residues GRFASPSNDFSNSEKRHILSKYQIDGSVVFDSQAMTLSRGDIVTTLTANETELLCILMQGTASKQAVIEQIWESKGLFVT EGSYHQLVRALRVKLDEQGIPPTQVKTLPRLGLRFLGFAELLDASPPSPDAHAASASPASSEPEPAAAPAGAQAALAEAI APSVPIAPRASSAPDTANTVTAPIAAAAPPPSAAPSAPPPGAASAPLPATRAAHARSPRRRAAYLAIYVTLAAWASVLTW QTFRHRDNTFRFRFTRTVDGIHYFSDGRMNQPNLLKAIDVKPLKGSFVYEIELGSNDWLAVCPESIYETPELCQAYFFEK NN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34685; Mature: 34554
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRFASPSNDFSNSEKRHILSKYQIDGSVVFDSQAMTLSRGDIVTTLTANETELLCILMQ CCCCCCCCCCCCCCHHHHHHHHEECCCEEEECCCCEEEECCCEEEEEECCCCEEEEEEEC GTASKQAVIEQIWESKGLFVTEGSYHQLVRALRVKLDEQGIPPTQVKTLPRLGLRFLGFA CCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH ELLDASPPSPDAHAASASPASSEPEPAAAPAGAQAALAEAIAPSVPIAPRASSAPDTANT HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC VTAPIAAAAPPPSAAPSAPPPGAASAPLPATRAAHARSPRRRAAYLAIYVTLAAWASVLT EECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH WQTFRHRDNTFRFRFTRTVDGIHYFSDGRMNQPNLLKAIDVKPLKGSFVYEIELGSNDWL HHHHHCCCCEEEEEEEEEECCEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCEE AVCPESIYETPELCQAYFFEKNN EECCHHHCCCHHHHHHHHHCCCC >Mature Secondary Structure GRFASPSNDFSNSEKRHILSKYQIDGSVVFDSQAMTLSRGDIVTTLTANETELLCILMQ CCCCCCCCCCCCCHHHHHHHHEECCCEEEECCCCEEEECCCEEEEEECCCCEEEEEEEC GTASKQAVIEQIWESKGLFVTEGSYHQLVRALRVKLDEQGIPPTQVKTLPRLGLRFLGFA CCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH ELLDASPPSPDAHAASASPASSEPEPAAAPAGAQAALAEAIAPSVPIAPRASSAPDTANT HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC VTAPIAAAAPPPSAAPSAPPPGAASAPLPATRAAHARSPRRRAAYLAIYVTLAAWASVLT EECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH WQTFRHRDNTFRFRFTRTVDGIHYFSDGRMNQPNLLKAIDVKPLKGSFVYEIELGSNDWL HHHHHCCCCEEEEEEEEEECCEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCEE AVCPESIYETPELCQAYFFEKNN EECCHHHCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA