| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is 76818258
Identifier: 76818258
GI number: 76818258
Start: 2177290
End: 2177802
Strand: Direct
Name: 76818258
Synonym: BURPS1710b_A1788
Alternate gene names: NA
Gene position: 2177290-2177802 (Clockwise)
Preceding gene: 76817642
Following gene: 76818828
Centisome position: 68.43
GC content: 75.24
Gene sequence:
>513_bases GTGGCCGACGCGCTCGCGCGCGTCGCGCTGCGCCAGCAGGGGCCGCGCCGCCATCTGATGCCGGTCGGCCTGATCGGGCC GCGCGACGCGACCGGCGAGCAGTTGCGCATCGCCGAGGGGGTCGCACGTGCGCTTGCCGCGACGGGGCTCGTGATCGTCG GCGGCGGCAAGGACGGCGTGATGGAGGCGGCGGCGCGCGGCGCGCGGCGCGCGAACGGGCTCGTGATCGGCCTGTTGCCC GAGGACGACGCCGGCGGCGCGAATCCGCACCTGAGCGTCGCGTTGCCGACGGGGCTCGGCATCACGCGCAACGCGCTGAT CGCGCGCGCGTCGTTGTGCCTGGTCGCGGTCGGCGGCGGACTCGGCACGCTGTCCGAGATCGCGCTCGGCCTGCAGTGGG GCAAGCCGGTCTTCACGATTTGCGACGCGCCGCAGGTGACGGGCGTGGAGAACTTCGACGCGCCCGATCGGCTGCTCGCG CGCGTCGCGCAGTGGCTCGCCGATTCGGCGTAG
Upstream 100 bases:
>100_bases CAGGCCGCCGTGCTGTCGATCGTGTTGACGGCGCTGTGCACATGCGTGCTCGCGATGGGGGAATACGTTGGGCGACGACA TCGCTGAATACAAGCCGGAT
Downstream 100 bases:
>100_bases CCGCGTCGGGGGCGGGGGAATGAACACGCTTCATTCGTTTGATGCTATTTGACAGGAATCCTATTCATGAAAAAGGGGGC AGCAGCATGGTTGGTGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MADALARVALRQQGPRRHLMPVGLIGPRDATGEQLRIAEGVARALAATGLVIVGGGKDGVMEAAARGARRANGLVIGLLP EDDAGGANPHLSVALPTGLGITRNALIARASLCLVAVGGGLGTLSEIALGLQWGKPVFTICDAPQVTGVENFDAPDRLLA RVAQWLADSA
Sequences:
>Translated_170_residues MADALARVALRQQGPRRHLMPVGLIGPRDATGEQLRIAEGVARALAATGLVIVGGGKDGVMEAAARGARRANGLVIGLLP EDDAGGANPHLSVALPTGLGITRNALIARASLCLVAVGGGLGTLSEIALGLQWGKPVFTICDAPQVTGVENFDAPDRLLA RVAQWLADSA >Mature_169_residues ADALARVALRQQGPRRHLMPVGLIGPRDATGEQLRIAEGVARALAATGLVIVGGGKDGVMEAAARGARRANGLVIGLLPE DDAGGANPHLSVALPTGLGITRNALIARASLCLVAVGGGLGTLSEIALGLQWGKPVFTICDAPQVTGVENFDAPDRLLAR VAQWLADSA
Specific function: Unknown
COG id: COG1611
COG function: function code R; Predicted Rossmann fold nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005268 - InterPro: IPR005269 [H]
Pfam domain/function: PF03641 Lysine_decarbox [H]
EC number: NA
Molecular weight: Translated: 17294; Mature: 17163
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADALARVALRQQGPRRHLMPVGLIGPRDATGEQLRIAEGVARALAATGLVIVGGGKDGV CCHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCHH MEAAARGARRANGLVIGLLPEDDAGGANPHLSVALPTGLGITRNALIARASLCLVAVGGG HHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHEEEEEECCC LGTLSEIALGLQWGKPVFTICDAPQVTGVENFDAPDRLLARVAQWLADSA CCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure ADALARVALRQQGPRRHLMPVGLIGPRDATGEQLRIAEGVARALAATGLVIVGGGKDGV CHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCHH MEAAARGARRANGLVIGLLPEDDAGGANPHLSVALPTGLGITRNALIARASLCLVAVGGG HHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHEEEEEECCC LGTLSEIALGLQWGKPVFTICDAPQVTGVENFDAPDRLLARVAQWLADSA CCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]