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The map label for this gene is sctV [H]

Identifier: 76818195

GI number: 76818195

Start: 594935

End: 597052

Strand: Direct

Name: sctV [H]

Synonym: BURPS1710b_A0428

Alternate gene names: 76818195

Gene position: 594935-597052 (Clockwise)

Preceding gene: 76819009

Following gene: 76819487

Centisome position: 18.7

GC content: 64.02

Gene sequence:

>2118_bases
ATGTTCAAATCGCTGAAACTGCCCGCGGGCGGTGAAATCGGAATCGTCGCCCTGGTCATCGCGATCATCTCGCTGATGAT
ACTGCCGCTGCCGCCAGTCGCGATCGACCTGCTGCTCGGCATCAACATCACCATCAGCGTGACGCTGCTGATGGTGACGA
TGTACGTTCCGGATATCGCCGCGCTGTCCGCGTTTCCGTCGCTCCTGCTGTTCACGACGCTGTTCCGGCTGTCGCTCAAC
ATCGCGTCCACCAAGTCGATCCTGCTGCATGCGGAAGCGGGCAACATTATCGAGAGCTTTGGCCAGCTGGTGGTGGGCGG
CAACCTCGTCGTGGGCCTGGTCGTATTCGCCATCATCACGACCGTGCAATTCATCGTGATCGCGAAAGGCTCCGAGCGTG
TTGCGGAAGTCGGCGCCCGCTTCACGCTGGATGCGCTTCCGGGCAAGCAGATGAGCATCGACGCCGATTTGCGCTCCGGC
CTGCTGAGCACCGAGGAGGCACGGAAGAAGCGCGCGACGCTGGCGGTCGAAAGCCAATTGCACGGCGGGATGGATGGCGC
GATGAAATTCGTCAAGGGCGACGCGATCGCCGGTCTCATCATCACGATGATCAACATCGTCGCGGGCATTGCGGTCGGCG
TTGCATATCACGGAATGTCGGCGGGCGACGCGGCAAACCGCTTCTCCGTATTGTCCGTCGGCGACGCGATGGTGTCGCAG
ATTCCGTCCCTGTTGCTCTCCGTCGCGGCAGGCGTGATGATCACGCGCGTCACCGACGAGCGCGCGCCGAAGCGGCGCTC
GCTCGGCGATGAAATCAGCCACCAGCTCGGCTCGAGCGCGCGTGCATTGTATTTCGCAGCGTTTCTCCTGCTCGGCTTCG
CCGCCGTGCCGGGCTTCCCCGCGGCGCTGTTCGTGCTGCTTGCCGCCGCGCTCGCGTTCGCCGGCTATCGACTGTCACGA
AAGGGTTCGCCATCGTCCGGCGCCGCTCGCGGACAAGAGCAGGAGGCGCTGCGTGCGATGCAGCGTTCGGGCGCCAAGGC
GGACGTCCCTCCGATCCTGCCGCGCGCGCCTCAGTTCGCTTGCGCCGTCGGCGTTCGGATCGCGCCGGATCTCGCGTCCG
GTCTTGCGTTGCCGAGGCTCGACGAAGCGCTCGACCTCGAGCGTGCACGCCTGCAGGACGAACTCGGGCTTCCTTTTCCC
GGCGTGACGATGTGGATTCATCCGACGCTCTCGGCAGCAACCTTCGAAGTGCTGATCCACGACGTGCCGCATCTTTCCGT
CACGCTTCCGGCTCGCAAGGCGATGCTGCCGCAGCAAAGGCATCTGTCGCCCGCTCACGCCGCGCTGACGGACGAGCAAA
AGGCGCGGCACCGGGATTTGATCGAACGGAGCGAAGCCGGCCCGCCGATCGACGCAAGCGGCCAAGCGACCCACTGGATC
GACGAGCCGGCGGTCACCGCGAAGGACAGCGTATGGCGCGCAGAACAGATCATCGCGTACGCATCCGTGGCGGCGATCCG
CACTCACGCACCGCTTTTTGTCGGCATCCAGGAAGTGCAGTGGATACTCGATCAGTTGGGCGCCGACTCGCCGGGCCTCG
TCGCCGAAGTGCTGAAGATCTTGCCGTCGACGCGCATTGCCGATGTGCTACGCCGCCTGCTTGAAGAGCAGATATCGATC
CGCAACGTGCGAACGATCATGGAAAGTCTGGTCGCATGGGGCGCGAAGGAGAAAGACATGCTGATGTTGACCGAATACGT
GCGCGGCGACCTGTCGCGCTTTCTCGCCCATCGAGCCGCGCAAGGCGAACGCGTGTTGTCCGCGGTCCTGTTCGACCTGC
AGGCGGAACAGCACATCCGCCAGGCGATCAAGCAAACGCCGACAGGCAATTTCCTCGCACTGCCCCCGGACGACGCATCG
CGGCTTGTCGATCGCATTCAGTCGCTCGTCGGCGCGAACGCCCGCACGGACATCGCGCTCGTCACCTCGATGGACATTCG
CCGCTATGTACGACGAATGATCGAGCGACGCATCGACTGGCTAGCCGTGTATTCGTATCAAGAGCTCGGCGAACACGTCG
AGCTGCGTCCGGTCGGCCGCGTGTCGCTCCAGGGTTGA

Upstream 100 bases:

>100_bases
GGTGCCCGAAGAACTGTTCGAGATCGTTGCAGCGATCCTGCGCTGGATCGACGCGATCGGCCCGCGCCGAAACGAACGGG
CCTGATTCGCCGGAGCGTCC

Downstream 100 bases:

>100_bases
TGACGACCGTGGCGCATATCGGCTCCCGTCCATTGCGCATCATCCCGGGCAGCACACCCGCGGCGCCGGACGAAACGCGC
CAACGCCGCTTCGACTACGC

Product: SctV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 705; Mature: 705

Protein sequence:

>705_residues
MFKSLKLPAGGEIGIVALVIAIISLMILPLPPVAIDLLLGINITISVTLLMVTMYVPDIAALSAFPSLLLFTTLFRLSLN
IASTKSILLHAEAGNIIESFGQLVVGGNLVVGLVVFAIITTVQFIVIAKGSERVAEVGARFTLDALPGKQMSIDADLRSG
LLSTEEARKKRATLAVESQLHGGMDGAMKFVKGDAIAGLIITMINIVAGIAVGVAYHGMSAGDAANRFSVLSVGDAMVSQ
IPSLLLSVAAGVMITRVTDERAPKRRSLGDEISHQLGSSARALYFAAFLLLGFAAVPGFPAALFVLLAAALAFAGYRLSR
KGSPSSGAARGQEQEALRAMQRSGAKADVPPILPRAPQFACAVGVRIAPDLASGLALPRLDEALDLERARLQDELGLPFP
GVTMWIHPTLSAATFEVLIHDVPHLSVTLPARKAMLPQQRHLSPAHAALTDEQKARHRDLIERSEAGPPIDASGQATHWI
DEPAVTAKDSVWRAEQIIAYASVAAIRTHAPLFVGIQEVQWILDQLGADSPGLVAEVLKILPSTRIADVLRRLLEEQISI
RNVRTIMESLVAWGAKEKDMLMLTEYVRGDLSRFLAHRAAQGERVLSAVLFDLQAEQHIRQAIKQTPTGNFLALPPDDAS
RLVDRIQSLVGANARTDIALVTSMDIRRYVRRMIERRIDWLAVYSYQELGEHVELRPVGRVSLQG

Sequences:

>Translated_705_residues
MFKSLKLPAGGEIGIVALVIAIISLMILPLPPVAIDLLLGINITISVTLLMVTMYVPDIAALSAFPSLLLFTTLFRLSLN
IASTKSILLHAEAGNIIESFGQLVVGGNLVVGLVVFAIITTVQFIVIAKGSERVAEVGARFTLDALPGKQMSIDADLRSG
LLSTEEARKKRATLAVESQLHGGMDGAMKFVKGDAIAGLIITMINIVAGIAVGVAYHGMSAGDAANRFSVLSVGDAMVSQ
IPSLLLSVAAGVMITRVTDERAPKRRSLGDEISHQLGSSARALYFAAFLLLGFAAVPGFPAALFVLLAAALAFAGYRLSR
KGSPSSGAARGQEQEALRAMQRSGAKADVPPILPRAPQFACAVGVRIAPDLASGLALPRLDEALDLERARLQDELGLPFP
GVTMWIHPTLSAATFEVLIHDVPHLSVTLPARKAMLPQQRHLSPAHAALTDEQKARHRDLIERSEAGPPIDASGQATHWI
DEPAVTAKDSVWRAEQIIAYASVAAIRTHAPLFVGIQEVQWILDQLGADSPGLVAEVLKILPSTRIADVLRRLLEEQISI
RNVRTIMESLVAWGAKEKDMLMLTEYVRGDLSRFLAHRAAQGERVLSAVLFDLQAEQHIRQAIKQTPTGNFLALPPDDAS
RLVDRIQSLVGANARTDIALVTSMDIRRYVRRMIERRIDWLAVYSYQELGEHVELRPVGRVSLQG
>Mature_705_residues
MFKSLKLPAGGEIGIVALVIAIISLMILPLPPVAIDLLLGINITISVTLLMVTMYVPDIAALSAFPSLLLFTTLFRLSLN
IASTKSILLHAEAGNIIESFGQLVVGGNLVVGLVVFAIITTVQFIVIAKGSERVAEVGARFTLDALPGKQMSIDADLRSG
LLSTEEARKKRATLAVESQLHGGMDGAMKFVKGDAIAGLIITMINIVAGIAVGVAYHGMSAGDAANRFSVLSVGDAMVSQ
IPSLLLSVAAGVMITRVTDERAPKRRSLGDEISHQLGSSARALYFAAFLLLGFAAVPGFPAALFVLLAAALAFAGYRLSR
KGSPSSGAARGQEQEALRAMQRSGAKADVPPILPRAPQFACAVGVRIAPDLASGLALPRLDEALDLERARLQDELGLPFP
GVTMWIHPTLSAATFEVLIHDVPHLSVTLPARKAMLPQQRHLSPAHAALTDEQKARHRDLIERSEAGPPIDASGQATHWI
DEPAVTAKDSVWRAEQIIAYASVAAIRTHAPLFVGIQEVQWILDQLGADSPGLVAEVLKILPSTRIADVLRRLLEEQISI
RNVRTIMESLVAWGAKEKDMLMLTEYVRGDLSRFLAHRAAQGERVLSAVLFDLQAEQHIRQAIKQTPTGNFLALPPDDAS
RLVDRIQSLVGANARTDIALVTSMDIRRYVRRMIERRIDWLAVYSYQELGEHVELRPVGRVSLQG

Specific function: Involved in the secretion of popA, a proteinaceous elicitor of the hypersensitivity response in plants [H]

COG id: COG4789

COG function: function code U; Type III secretory pathway, component EscV

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family [H]

Homologues:

Organism=Escherichia coli, GI1788187, Length=705, Percent_Identity=33.1914893617021, Blast_Score=313, Evalue=3e-86,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001712
- InterPro:   IPR006302 [H]

Pfam domain/function: PF00771 FHIPEP [H]

EC number: NA

Molecular weight: Translated: 75867; Mature: 75867

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS00994 FHIPEP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKSLKLPAGGEIGIVALVIAIISLMILPLPPVAIDLLLGINITISVTLLMVTMYVPDIA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHCHHH
ALSAFPSLLLFTTLFRLSLNIASTKSILLHAEAGNIIESFGQLVVGGNLVVGLVVFAIIT
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
TVQFIVIAKGSERVAEVGARFTLDALPGKQMSIDADLRSGLLSTEEARKKRATLAVESQL
HHHHHEEECCCHHHHHHCCCEEEECCCCCCEEECHHHHHCCCCHHHHHHHHHHHHHHHHH
HGGMDGAMKFVKGDAIAGLIITMINIVAGIAVGVAYHGMSAGDAANRFSVLSVGDAMVSQ
CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHH
IPSLLLSVAAGVMITRVTDERAPKRRSLGDEISHQLGSSARALYFAAFLLLGFAAVPGFP
HHHHHHHHHHHHHEEEECHHCCCHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCH
AALFVLLAAALAFAGYRLSRKGSPSSGAARGQEQEALRAMQRSGAKADVPPILPRAPQFA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
CAVGVRIAPDLASGLALPRLDEALDLERARLQDELGLPFPGVTMWIHPTLSAATFEVLIH
HHHCCEECCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHH
DVPHLSVTLPARKAMLPQQRHLSPAHAALTDEQKARHRDLIERSEAGPPIDASGQATHWI
CCCCCEEECCHHHHCCCHHHCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
DEPAVTAKDSVWRAEQIIAYASVAAIRTHAPLFVGIQEVQWILDQLGADSPGLVAEVLKI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LPSTRIADVLRRLLEEQISIRNVRTIMESLVAWGAKEKDMLMLTEYVRGDLSRFLAHRAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC
QGERVLSAVLFDLQAEQHIRQAIKQTPTGNFLALPPDDASRLVDRIQSLVGANARTDIAL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCEEE
VTSMDIRRYVRRMIERRIDWLAVYSYQELGEHVELRPVGRVSLQG
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEECCC
>Mature Secondary Structure
MFKSLKLPAGGEIGIVALVIAIISLMILPLPPVAIDLLLGINITISVTLLMVTMYVPDIA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHCHHH
ALSAFPSLLLFTTLFRLSLNIASTKSILLHAEAGNIIESFGQLVVGGNLVVGLVVFAIIT
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
TVQFIVIAKGSERVAEVGARFTLDALPGKQMSIDADLRSGLLSTEEARKKRATLAVESQL
HHHHHEEECCCHHHHHHCCCEEEECCCCCCEEECHHHHHCCCCHHHHHHHHHHHHHHHHH
HGGMDGAMKFVKGDAIAGLIITMINIVAGIAVGVAYHGMSAGDAANRFSVLSVGDAMVSQ
CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHH
IPSLLLSVAAGVMITRVTDERAPKRRSLGDEISHQLGSSARALYFAAFLLLGFAAVPGFP
HHHHHHHHHHHHHEEEECHHCCCHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCH
AALFVLLAAALAFAGYRLSRKGSPSSGAARGQEQEALRAMQRSGAKADVPPILPRAPQFA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
CAVGVRIAPDLASGLALPRLDEALDLERARLQDELGLPFPGVTMWIHPTLSAATFEVLIH
HHHCCEECCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHH
DVPHLSVTLPARKAMLPQQRHLSPAHAALTDEQKARHRDLIERSEAGPPIDASGQATHWI
CCCCCEEECCHHHHCCCHHHCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
DEPAVTAKDSVWRAEQIIAYASVAAIRTHAPLFVGIQEVQWILDQLGADSPGLVAEVLKI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LPSTRIADVLRRLLEEQISIRNVRTIMESLVAWGAKEKDMLMLTEYVRGDLSRFLAHRAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC
QGERVLSAVLFDLQAEQHIRQAIKQTPTGNFLALPPDDASRLVDRIQSLVGANARTDIAL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCEEE
VTSMDIRRYVRRMIERRIDWLAVYSYQELGEHVELRPVGRVSLQG
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8316211; 11823852 [H]