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The map label for this gene is parB [H]

Identifier: 76818177

GI number: 76818177

Start: 1833529

End: 1834596

Strand: Direct

Name: parB [H]

Synonym: BURPS1710b_A1504

Alternate gene names: 76818177

Gene position: 1833529-1834596 (Clockwise)

Preceding gene: 76818525

Following gene: 76817845

Centisome position: 57.63

GC content: 60.77

Gene sequence:

>1068_bases
ATGAAACCCTCCCAATTCGCCAAAGGCTTCCAAGCGCGCCCCGACATCACGACCAGCGAAAAGCGCACGGCGCTCGATCG
GCTCAATGCGATCGACGGCCTCGTCAAATCCGAAGCCGCGGCGCCCGCCGCCCCCCCCAGCAAATCGTCGAAGAAGAACC
TTCCCGTCACAATCGTCGAAACGCCGCCCACTGCGGACGCAGCCGACGAATCGAGCCAATATCGTTCGTGGCGAATCGAC
AATCGCTATCAGCCTGGCCAAGTGATCGAACTGCCGCTCAAGGCGATCAAGCCGAGCCCGTTCAACCCTCGGCACTTCTA
CCTGAAGTCGTCCATCGCGGAGCTGGCGGTCAATCTGGCGAAACAGGGCCAACAGCAAGCAATCCACGTCATTCCCGATT
ACGACAACCCGGGCTCGTACTTCGTCAGCGACGGCGGCCGCCGTGTCCGCGCACTGAAGGAAGCGAACAAGGAATCGGTC
AAGGCAATCGTCGTCGATCTGCCGATCGGCATTCAGAGCTACAAACTCGGCTACGACCTCAACGTCCAACGCGATTCGCA
AACGGTCTTCGACAACGCGATCGTCTGGAAGCGCTTTCTCGAGGAAAAGTATTTTCAGAGCCAAAAGGAATTGGCCGAGC
ATCTCGGGCTCGACGAATCGACGGTTGCCGTTGCGCTGTCGATCGGCAAATTGCCCGAAGCCGTGATGCAGGAAATGGTT
GCGCGCCCGGATCGCTTCGGCTCGAACATGGCATATCAGGTGGGCCGCTATCACGCGGCGCGCGGCACCGACTCGACGCT
GCGCCTCATCAACAAGATCCTGTCCGACGACCTCAGCACCCGTCAGGTCGCCGATATCGTGAAGGGAAGGGCGACCACAC
AGGAAAGCCCGAAGCCCGCGAGCCGGCAGCGGTATGCGCAGCGGCACGAGATCAAGCTGAACGGCGTATCGGTCGGCGAT
CTGAAGTCGTATGGCGAGGATCGGCTGGAGCTACGGCTGCGCGGCCTGACGCGAGAAAAGCGGGACGAGATCCTGCAGCA
GCTCGAGCGGATGCTGTTGTCGAACTGA

Upstream 100 bases:

>100_bases
GAACGACCGCGGCGCAAAGCTCGCAGCGGCAGAAATTCGTGCATGCGCCGACGAGATCGTCGCGATGCTGCCCTGACTTT
ATGCGCATAAAGGACCCTGA

Downstream 100 bases:

>100_bases
ACGAGCGAATCGAAAAGAAACGGGGCCCAGCGGGCCCCGTTTCTTCTTGCGCGTGCGAAAGACGAAAATATCCGGTGAAC
CGGGCCCGCCTCAAGCCGCG

Product: parB family protein

Products: NA

Alternate protein names: Noc [H]

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MKPSQFAKGFQARPDITTSEKRTALDRLNAIDGLVKSEAAAPAAPPSKSSKKNLPVTIVETPPTADAADESSQYRSWRID
NRYQPGQVIELPLKAIKPSPFNPRHFYLKSSIAELAVNLAKQGQQQAIHVIPDYDNPGSYFVSDGGRRVRALKEANKESV
KAIVVDLPIGIQSYKLGYDLNVQRDSQTVFDNAIVWKRFLEEKYFQSQKELAEHLGLDESTVAVALSIGKLPEAVMQEMV
ARPDRFGSNMAYQVGRYHAARGTDSTLRLINKILSDDLSTRQVADIVKGRATTQESPKPASRQRYAQRHEIKLNGVSVGD
LKSYGEDRLELRLRGLTREKRDEILQQLERMLLSN

Sequences:

>Translated_355_residues
MKPSQFAKGFQARPDITTSEKRTALDRLNAIDGLVKSEAAAPAAPPSKSSKKNLPVTIVETPPTADAADESSQYRSWRID
NRYQPGQVIELPLKAIKPSPFNPRHFYLKSSIAELAVNLAKQGQQQAIHVIPDYDNPGSYFVSDGGRRVRALKEANKESV
KAIVVDLPIGIQSYKLGYDLNVQRDSQTVFDNAIVWKRFLEEKYFQSQKELAEHLGLDESTVAVALSIGKLPEAVMQEMV
ARPDRFGSNMAYQVGRYHAARGTDSTLRLINKILSDDLSTRQVADIVKGRATTQESPKPASRQRYAQRHEIKLNGVSVGD
LKSYGEDRLELRLRGLTREKRDEILQQLERMLLSN
>Mature_355_residues
MKPSQFAKGFQARPDITTSEKRTALDRLNAIDGLVKSEAAAPAAPPSKSSKKNLPVTIVETPPTADAADESSQYRSWRID
NRYQPGQVIELPLKAIKPSPFNPRHFYLKSSIAELAVNLAKQGQQQAIHVIPDYDNPGSYFVSDGGRRVRALKEANKESV
KAIVVDLPIGIQSYKLGYDLNVQRDSQTVFDNAIVWKRFLEEKYFQSQKELAEHLGLDESTVAVALSIGKLPEAVMQEMV
ARPDRFGSNMAYQVGRYHAARGTDSTLRLINKILSDDLSTRQVADIVKGRATTQESPKPASRQRYAQRHEIKLNGVSVGD
LKSYGEDRLELRLRGLTREKRDEILQQLERMLLSN

Specific function: Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division an

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 39745; Mature: 39745

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPSQFAKGFQARPDITTSEKRTALDRLNAIDGLVKSEAAAPAAPPSKSSKKNLPVTIVE
CCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE
TPPTADAADESSQYRSWRIDNRYQPGQVIELPLKAIKPSPFNPRHFYLKSSIAELAVNLA
CCCCCCCCCCCHHHCCCCCCCCCCCCCEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHH
KQGQQQAIHVIPDYDNPGSYFVSDGGRRVRALKEANKESVKAIVVDLPIGIQSYKLGYDL
HCCCCCEEEEECCCCCCCCEEECCCCHHHHHHHHCCHHCEEEEEEECCCCCEEEECCCCE
NVQRDSQTVFDNAIVWKRFLEEKYFQSQKELAEHLGLDESTVAVALSIGKLPEAVMQEMV
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEHHHHCCCHHHHHHHH
ARPDRFGSNMAYQVGRYHAARGTDSTLRLINKILSDDLSTRQVADIVKGRATTQESPKPA
HCCHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCH
SRQRYAQRHEIKLNGVSVGDLKSYGEDRLELRLRGLTREKRDEILQQLERMLLSN
HHHHHHHHHCEEECCCCCHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKPSQFAKGFQARPDITTSEKRTALDRLNAIDGLVKSEAAAPAAPPSKSSKKNLPVTIVE
CCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE
TPPTADAADESSQYRSWRIDNRYQPGQVIELPLKAIKPSPFNPRHFYLKSSIAELAVNLA
CCCCCCCCCCCHHHCCCCCCCCCCCCCEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHH
KQGQQQAIHVIPDYDNPGSYFVSDGGRRVRALKEANKESVKAIVVDLPIGIQSYKLGYDL
HCCCCCEEEEECCCCCCCCEEECCCCHHHHHHHHCCHHCEEEEEEECCCCCEEEECCCCE
NVQRDSQTVFDNAIVWKRFLEEKYFQSQKELAEHLGLDESTVAVALSIGKLPEAVMQEMV
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEHHHHCCCHHHHHHHH
ARPDRFGSNMAYQVGRYHAARGTDSTLRLINKILSDDLSTRQVADIVKGRATTQESPKPA
HCCHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCH
SRQRYAQRHEIKLNGVSVGDLKSYGEDRLELRLRGLTREKRDEILQQLERMLLSN
HHHHHHHHHCEEECCCCCHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA