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The map label for this gene is padR [H]

Identifier: 76818167

GI number: 76818167

Start: 125206

End: 125796

Strand: Direct

Name: padR [H]

Synonym: BURPS1710b_A0095

Alternate gene names: 76818167

Gene position: 125206-125796 (Clockwise)

Preceding gene: 76819041

Following gene: 76818856

Centisome position: 3.94

GC content: 68.36

Gene sequence:

>591_bases
ATGCGAGGATTTCGATCCTTCGGTTGCCTCGCAATGTCCCTGCCCCACGCGCTGCTCACGTCCCTCGCCGAACGTCCCGG
CTCCGGCTCGGAGCTGACGCGCCGCTTCGATCGCTCGATCGGCTACTTCTGGCACGCGACGCACCAGCAGATCTACCGTG
AGCTCGCGCGGCTGGAGGACGAAGGCTGGGTCGAGTCGACCCCCGTCGAGCAGGCGCGCGGGCGCAAGCGCGCATACCGG
ATCCTGCCCGCCGGGCGCAAGGAGCTCAAACGCTGGATCGCGCAGCACGACGATCCGAAGCCGCTGCGCGACGAGCTGAT
GATCCGGCTGCGCGCGGAAGCGGTCGTCGGCCCGACCGGGCTCGCGGACGAAATCCGGCGGCGGCTCGACCTGCATCGGC
AAAAGCTCGCGCTGTACCGCGAGATCGAGGCGCGCGATTTCACGCACGGCATGGACACCCGGGAGCGGCGCTTGCAGCAT
CTCGTGTTGCATGCGGGCATCATGCAGGAAAGCCAGAGCATCGAGCTGTTGCGGCAGGCGCTCGACATTCTGTCGATGCC
CGAAGCGCGAGCGAAGCCGCGCGGCGCGTGA

Upstream 100 bases:

>100_bases
ATGCAACGGGTTGCACAAATATAGCGACGCCCCTCCTCAAATGCAACGCGTTGCATAAAGTGCGCCCTCTAAACGGGCGC
GCGCGTGGCGATATGGCAAG

Downstream 100 bases:

>100_bases
CGCCCGCCGGCGCGGCCGCGGCGATGCATGCCGCGGCCGAGCAAGCCGCGGGGCCGCGGCCCGGCATCGACGACGCGCGA
AGATCGTTGTCGGCTTGACG

Product: PadR-like family regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MRGFRSFGCLAMSLPHALLTSLAERPGSGSELTRRFDRSIGYFWHATHQQIYRELARLEDEGWVESTPVEQARGRKRAYR
ILPAGRKELKRWIAQHDDPKPLRDELMIRLRAEAVVGPTGLADEIRRRLDLHRQKLALYREIEARDFTHGMDTRERRLQH
LVLHAGIMQESQSIELLRQALDILSMPEARAKPRGA

Sequences:

>Translated_196_residues
MRGFRSFGCLAMSLPHALLTSLAERPGSGSELTRRFDRSIGYFWHATHQQIYRELARLEDEGWVESTPVEQARGRKRAYR
ILPAGRKELKRWIAQHDDPKPLRDELMIRLRAEAVVGPTGLADEIRRRLDLHRQKLALYREIEARDFTHGMDTRERRLQH
LVLHAGIMQESQSIELLRQALDILSMPEARAKPRGA
>Mature_196_residues
MRGFRSFGCLAMSLPHALLTSLAERPGSGSELTRRFDRSIGYFWHATHQQIYRELARLEDEGWVESTPVEQARGRKRAYR
ILPAGRKELKRWIAQHDDPKPLRDELMIRLRAEAVVGPTGLADEIRRRLDLHRQKLALYREIEARDFTHGMDTRERRLQH
LVLHAGIMQESQSIELLRQALDILSMPEARAKPRGA

Specific function: Negative transcriptional regulator of padC phenolic acid decarboxylase [H]

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018309
- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR; PF10400 Vir_act_alpha_C [H]

EC number: NA

Molecular weight: Translated: 22752; Mature: 22752

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGFRSFGCLAMSLPHALLTSLAERPGSGSELTRRFDRSIGYFWHATHQQIYRELARLED
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EGWVESTPVEQARGRKRAYRILPAGRKELKRWIAQHDDPKPLRDELMIRLRAEAVVGPTG
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
LADEIRRRLDLHRQKLALYREIEARDFTHGMDTRERRLQHLVLHAGIMQESQSIELLRQA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDILSMPEARAKPRGA
HHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRGFRSFGCLAMSLPHALLTSLAERPGSGSELTRRFDRSIGYFWHATHQQIYRELARLED
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EGWVESTPVEQARGRKRAYRILPAGRKELKRWIAQHDDPKPLRDELMIRLRAEAVVGPTG
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
LADEIRRRLDLHRQKLALYREIEARDFTHGMDTRERRLQHLVLHAGIMQESQSIELLRQA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDILSMPEARAKPRGA
HHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]