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The map label for this gene is ceoR [H]

Identifier: 76818030

GI number: 76818030

Start: 2430273

End: 2431043

Strand: Direct

Name: ceoR [H]

Synonym: BURPS1710b_A1993

Alternate gene names: 76818030

Gene position: 2430273-2431043 (Clockwise)

Preceding gene: 76819100

Following gene: 76818438

Centisome position: 76.38

GC content: 72.37

Gene sequence:

>771_bases
ATGCGGACGAGGTCAACGCGGATCTGCTCGCGTTCCTCGCATCCTGAGCGGGCGGCGGCGCTCGCGGCTGACGGATCGGC
TCATCGATCTCGTCGGGAGGGCGTCGATTGCGTGGTGCGGGTCGGCGCGCTCGAGGATTCGGGTCTCGTCGCGCGCCGTG
TCGGCGCGATGGCGCCGTGCACGTGCGCGACGCCCGCGTATCTGCAGCGCTACGGCGTGCCCGAGACGCTCGATGCGCTC
GACGGCCACGTCGGCGTCCACTACACGTCGATGAACACCGGCAAGGCGCGGGTATGGTGCTTCATCGACGACGGCGAGCC
GAAGACCGTCGCGATGAAGGGCGCCGTGTCGGTCAACGATGCGGACGCGTATGTCGCGGCGGTGCTCGCCGGTCTCGGCC
TGGGGAAGACATCGCGATACCTCGTCGAGCCGCACCCGCGCACGGGCGCGCTGCGACGCGTGCCGAGCCGCTTCGACGAG
CCGCTTCGACGAGCCGGCGCGGCCGGTGTCGATCCTCCCTCTGCCGAATCGCAACCTGCCGCACAAGGTGCGCGTGTTCA
TCGAATGGCTGAGTGCGCGGTTCGAGCGGCACGACGGGCTGCGGCCGCCCGCCGGCTGAGCGGCGCGGCCGGGCGTCGGC
ACGCGGTGCGCGGCGCGCGACCGGCCGTGTCCGCCGTGCGTGCCGAACCGCCCCGCTCGCTCCGATATCCCGTATCCTGC
CCGGCAGGTGCCGACCGTCCGGGCTGCAACGGGCGCGTCGACCCGCCATGA

Upstream 100 bases:

>100_bases
ATGGTGCCGATCGACGCGTCCGCGCGCCTGTCCGCGAAGCTCGTCGCCGGCGCGACGCTGAAGGTGTATCCGGGCGGCTC
GCACGGGATCTGCGTCACGC

Downstream 100 bases:

>100_bases
CCGCCCGGCGTGTACGCCGGCATTCGACCCACGCAGATCGCGTGCATGCGCGACGCCGGGCGCGAGCCGCCCAGGCGGTG
CCCGCCCGCCGCTTGGGCAG

Product: LysR family regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MRTRSTRICSRSSHPERAAALAADGSAHRSRREGVDCVVRVGALEDSGLVARRVGAMAPCTCATPAYLQRYGVPETLDAL
DGHVGVHYTSMNTGKARVWCFIDDGEPKTVAMKGAVSVNDADAYVAAVLAGLGLGKTSRYLVEPHPRTGALRRVPSRFDE
PLRRAGAAGVDPPSAESQPAAQGARVHRMAECAVRAARRAAAARRLSGAAGRRHAVRGARPAVSAVRAEPPRSLRYPVSC
PAGADRPGCNGRVDPP

Sequences:

>Translated_256_residues
MRTRSTRICSRSSHPERAAALAADGSAHRSRREGVDCVVRVGALEDSGLVARRVGAMAPCTCATPAYLQRYGVPETLDAL
DGHVGVHYTSMNTGKARVWCFIDDGEPKTVAMKGAVSVNDADAYVAAVLAGLGLGKTSRYLVEPHPRTGALRRVPSRFDE
PLRRAGAAGVDPPSAESQPAAQGARVHRMAECAVRAARRAAAARRLSGAAGRRHAVRGARPAVSAVRAEPPRSLRYPVSC
PAGADRPGCNGRVDPP
>Mature_256_residues
MRTRSTRICSRSSHPERAAALAADGSAHRSRREGVDCVVRVGALEDSGLVARRVGAMAPCTCATPAYLQRYGVPETLDAL
DGHVGVHYTSMNTGKARVWCFIDDGEPKTVAMKGAVSVNDADAYVAAVLAGLGLGKTSRYLVEPHPRTGALRRVPSRFDE
PLRRAGAAGVDPPSAESQPAAQGARVHRMAECAVRAARRAAAARRLSGAAGRRHAVRGARPAVSAVRAEPPRSLRYPVSC
PAGADRPGCNGRVDPP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI145693193, Length=139, Percent_Identity=33.8129496402878, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1789639, Length=57, Percent_Identity=47.3684210526316, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 26930; Mature: 26930

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTRSTRICSRSSHPERAAALAADGSAHRSRREGVDCVVRVGALEDSGLVARRVGAMAPC
CCCCCCCHHCCCCCCHHHHHHHCCCHHHHHHHCCCEEEEEECCCCCCCHHHHHHCCCCCC
TCATPAYLQRYGVPETLDALDGHVGVHYTSMNTGKARVWCFIDDGEPKTVAMKGAVSVND
CCCCHHHHHHCCCCHHHHHHCCCCEEEEEECCCCCEEEEEEEECCCCCEEEEECCEECCC
ADAYVAAVLAGLGLGKTSRYLVEPHPRTGALRRVPSRFDEPLRRAGAAGVDPPSAESQPA
HHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
AQGARVHRMAECAVRAARRAAAARRLSGAAGRRHAVRGARPAVSAVRAEPPRSLRYPVSC
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHCCCCCCCCCCCCC
PAGADRPGCNGRVDPP
CCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRTRSTRICSRSSHPERAAALAADGSAHRSRREGVDCVVRVGALEDSGLVARRVGAMAPC
CCCCCCCHHCCCCCCHHHHHHHCCCHHHHHHHCCCEEEEEECCCCCCCHHHHHHCCCCCC
TCATPAYLQRYGVPETLDALDGHVGVHYTSMNTGKARVWCFIDDGEPKTVAMKGAVSVND
CCCCHHHHHHCCCCHHHHHHCCCCEEEEEECCCCCEEEEEEEECCCCCEEEEECCEECCC
ADAYVAAVLAGLGLGKTSRYLVEPHPRTGALRRVPSRFDEPLRRAGAAGVDPPSAESQPA
HHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
AQGARVHRMAECAVRAARRAAAARRLSGAAGRRHAVRGARPAVSAVRAEPPRSLRYPVSC
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHCCCCCCCCCCCCC
PAGADRPGCNGRVDPP
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]