| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is 76818020
Identifier: 76818020
GI number: 76818020
Start: 434876
End: 436021
Strand: Direct
Name: 76818020
Synonym: BURPS1710b_A0292
Alternate gene names: NA
Gene position: 434876-436021 (Clockwise)
Preceding gene: 76817292
Following gene: 76818773
Centisome position: 13.67
GC content: 68.59
Gene sequence:
>1146_bases GTGCCGAACGTCGTGCCGCGCGTGAGCTTGCGCGGCGTCTTCTGCTCTCTCAGAGCGTTCATCCGGATAGGCATGGGCGA GCCTCGTCAGGCGCTGCGCAGCGTCTGCGCGGCGGCGCGCGCGTTCTGCTCGAGCAACGGGGATGGCATCAGGTACGGCG TGAAGTGCTCCCAGAAGTGCCACTGCTCGGGCTGCTTCACGAGCGCTTCCTCGAGCTTGTCGGCGATCCGCTGGTGGGCC GCCGCGACGCGCGACGCGTCGTCGGCGACGCCGAGCATCCGCGGCGCGGGCCGCGCGTCGAGCTCGACGAAATGCACCTT GCACGCGTCGCGAAACGGCACGCCCGTCGCGTACGACACGAGCATCGGAATGTCGTGCTCGACCGCGAGCTTCACGCCGC CGCCCGCGAGCCGCACCCAGCGCCCGCCGAGCCGGCATGCGTTGGTCTTGCCGAAGCGGCCGTGCAAATCGGAGAACAGC AGGAACACGGGCGCTTCCTTGCGCAGGCCCGCGACGAGCCGGCGCAGATGCACGCGCTGCTCGATGTCGATCAGCTCGAT CTTGCCCGCGCCGTACTCTTGGACGAGGCGCAGCGCGTCGTCGAAGAACGCGCCGGGCGCGTCCTTGTGCATCACGATCA TCATCTTGCGGTCATCGGGAATCATCAGCCGCAGCTTCGACACGTACAGCATCAGGTTGCCGAAGTGCAGCCCCGCGAGC ATCAGCGGGCCGCCTCGCGCGAGCGCCGCGCGCAGCACGCCCTCGCCTTCGCACTCCATCCGGTCGATCAGCGTCTTCAT CGAAGCGATGCTGTGCGAGCGCAGCATCAGCCCCGCGACCTCGGCCTCGAACAGCTCGCGCACGATACCGTCGGCGACGC CGCGAATGCGCACCGGATCGTCGTTCAGATGCGCGCTCAGCATGTGCCGCACCGACATCTCGATCGAGCCGCGAATCGAC GGAAACAGGCGCAGGCACACGCCCGCGCACCAGCGCATCATGCCGAGCCCGCGCGCGGGCGAGCGGCCGAGCGCGATGCG CTTGACCACCCGCCGCAGGAGGAAGCAATACGAGAACGCGTTGAACAGGAAGAGCCGCATCAGCGTCATTTCTGCACCTC CAGCTCCGGCTGCCGCGCGGGCGTGA
Upstream 100 bases:
>100_bases GAGGCGCACGAGCGCGACGATGAACATCGCGAACATCATGATCGACAGATAGCAGAAAAAGCGCATCGAAATCGGCACGT CGACCACGCCGTTGATCACG
Downstream 100 bases:
>100_bases TATCGGCGAGGCGGCCGTCGCGCATCTCGTAGATGCGATCGACCATCGACAGGATCGACGCGTCGTGCGTGACGAGCACG ATCGTGCACGGCAACGTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MPNVVPRVSLRGVFCSLRAFIRIGMGEPRQALRSVCAAARAFCSSNGDGIRYGVKCSQKCHCSGCFTSASSSLSAIRWWA AATRDASSATPSIRGAGRASSSTKCTLHASRNGTPVAYDTSIGMSCSTASFTPPPASRTQRPPSRHALVLPKRPCKSENS RNTGASLRRPATSRRRCTRCSMSISSILPAPYSWTRRSASSKNAPGASLCITIIILRSSGIISRSFDTYSIRLPKCSPAS ISGPPRASAARSTPSPSHSIRSISVFIEAMLCERSISPATSASNSSRTIPSATPRMRTGSSFRCALSMCRTDISIEPRID GNRRRHTPAHQRIMPSPRAGERPSAMRLTTRRRRKQYENALNRKSRISVISAPPAPAAARA
Sequences:
>Translated_381_residues MPNVVPRVSLRGVFCSLRAFIRIGMGEPRQALRSVCAAARAFCSSNGDGIRYGVKCSQKCHCSGCFTSASSSLSAIRWWA AATRDASSATPSIRGAGRASSSTKCTLHASRNGTPVAYDTSIGMSCSTASFTPPPASRTQRPPSRHALVLPKRPCKSENS RNTGASLRRPATSRRRCTRCSMSISSILPAPYSWTRRSASSKNAPGASLCITIIILRSSGIISRSFDTYSIRLPKCSPAS ISGPPRASAARSTPSPSHSIRSISVFIEAMLCERSISPATSASNSSRTIPSATPRMRTGSSFRCALSMCRTDISIEPRID GNRRRHTPAHQRIMPSPRAGERPSAMRLTTRRRRKQYENALNRKSRISVISAPPAPAAARA >Mature_380_residues PNVVPRVSLRGVFCSLRAFIRIGMGEPRQALRSVCAAARAFCSSNGDGIRYGVKCSQKCHCSGCFTSASSSLSAIRWWAA ATRDASSATPSIRGAGRASSSTKCTLHASRNGTPVAYDTSIGMSCSTASFTPPPASRTQRPPSRHALVLPKRPCKSENSR NTGASLRRPATSRRRCTRCSMSISSILPAPYSWTRRSASSKNAPGASLCITIIILRSSGIISRSFDTYSIRLPKCSPASI SGPPRASAARSTPSPSHSIRSISVFIEAMLCERSISPATSASNSSRTIPSATPRMRTGSSFRCALSMCRTDISIEPRIDG NRRRHTPAHQRIMPSPRAGERPSAMRLTTRRRRKQYENALNRKSRISVISAPPAPAAARA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40958; Mature: 40827
Theoretical pI: Translated: 12.19; Mature: 12.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNVVPRVSLRGVFCSLRAFIRIGMGEPRQALRSVCAAARAFCSSNGDGIRYGVKCSQKC CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCC HCSGCFTSASSSLSAIRWWAAATRDASSATPSIRGAGRASSSTKCTLHASRNGTPVAYDT CCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEC SIGMSCSTASFTPPPASRTQRPPSRHALVLPKRPCKSENSRNTGASLRRPATSRRRCTRC CCCCEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHCCCCHHHHHHHHH SMSISSILPAPYSWTRRSASSKNAPGASLCITIIILRSSGIISRSFDTYSIRLPKCSPAS HHHHHHHCCCCCHHHHHCCCCCCCCCHHHEEEEEEECCCCCEEECCCEEEEECCCCCCCC ISGPPRASAARSTPSPSHSIRSISVFIEAMLCERSISPATSASNSSRTIPSATPRMRTGS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC SFRCALSMCRTDISIEPRIDGNRRRHTPAHQRIMPSPRAGERPSAMRLTTRRRRKQYENA HHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH LNRKSRISVISAPPAPAAARA HCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure PNVVPRVSLRGVFCSLRAFIRIGMGEPRQALRSVCAAARAFCSSNGDGIRYGVKCSQKC CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCC HCSGCFTSASSSLSAIRWWAAATRDASSATPSIRGAGRASSSTKCTLHASRNGTPVAYDT CCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEC SIGMSCSTASFTPPPASRTQRPPSRHALVLPKRPCKSENSRNTGASLRRPATSRRRCTRC CCCCEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHCCCCHHHHHHHHH SMSISSILPAPYSWTRRSASSKNAPGASLCITIIILRSSGIISRSFDTYSIRLPKCSPAS HHHHHHHCCCCCHHHHHCCCCCCCCCHHHEEEEEEECCCCCEEECCCEEEEECCCCCCCC ISGPPRASAARSTPSPSHSIRSISVFIEAMLCERSISPATSASNSSRTIPSATPRMRTGS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC SFRCALSMCRTDISIEPRIDGNRRRHTPAHQRIMPSPRAGERPSAMRLTTRRRRKQYENA HHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH LNRKSRISVISAPPAPAAARA HCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA