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The map label for this gene is lutC [H]

Identifier: 76818004

GI number: 76818004

Start: 2289545

End: 2290270

Strand: Direct

Name: lutC [H]

Synonym: BURPS1710b_A1875

Alternate gene names: 76818004

Gene position: 2289545-2290270 (Clockwise)

Preceding gene: 76819800

Following gene: 76817632

Centisome position: 71.96

GC content: 73.97

Gene sequence:

>726_bases
ATGAGCGCGCGCGACGACATTCTCGGCCGTATCCGCGCGGCGCTCGGCAGCGAGCGCGCGCGGCTTGCCGCGCAGTTTCC
GGCGCCGGCGCAAGCGAAGGGCGCGGGTGCGTCCGCGGCGCCGAATGCGAATGCCGCGTTCGCCCCGGACGCCTCGCTTT
CCACCGCGTCTTCCGCTGCGCGGGGCTCGGCGATTTCGCTCGGCGACGTCGATCTCGTCGCGCGCTTCGTCGCGAAGGCG
CAGCAGGTGTCGGCGACGTGCACGCATATCGCGACGGCCGCCGGCGCGCCCGCGGCCGTCGATGCCTATCTGCGCGACGC
GGGGCTTGCCGATGCGCCGCTCGTCGTCGCCGCGGCGCTCGACGCGCTGCCGTGGCGCGCGCATCGCGCGCTGCCCGGCG
TCGATCTGCGCCGCGACGGGCTCGTCAGCGTCACGCCGTCGTTCGCGGCGATCGCGGAGACGGGCAGCGTCGTGTGCCTG
TCGTCGAGCGCGACGCCGACGTCGCTGAACTTCGTCGCCGCCACGCACGTCGTGCTCGTGAACCGCAGCGCGATCGTCGC
GACGATGGAGGACGCGTGGGCGCGCGTGCGCGCGACGATCGCGACGCTGCCGCGCGCGGTGAACGTGATCACCGGGCCCT
CGCGCACCGCCGACGTCGAGCAGACCGTGCAAGTCGGCGTGCATGGCCCGAAGCGCGTGCTCGTGCTGATTTGCGACGAC
GCGTGA

Upstream 100 bases:

>100_bases
CCTCCGGCTGGACCGATTCGCGCGAATTGCCGAAACCGCCGCCGCGCACGTTCTTCGAGACGTGGGACGCGACGCGCACG
AATCAACCGGAGGTGCGTCG

Downstream 100 bases:

>100_bases
GCGCTCGCGCCGGCCGCGCGGCGGCTGCGTGCGGCGCGCGAACGCGGCGCGCCGATCGAGCGGCGGATGCGCAACGAATA
CGTAACGAATACGCAACGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MSARDDILGRIRAALGSERARLAAQFPAPAQAKGAGASAAPNANAAFAPDASLSTASSAARGSAISLGDVDLVARFVAKA
QQVSATCTHIATAAGAPAAVDAYLRDAGLADAPLVVAAALDALPWRAHRALPGVDLRRDGLVSVTPSFAAIAETGSVVCL
SSSATPTSLNFVAATHVVLVNRSAIVATMEDAWARVRATIATLPRAVNVITGPSRTADVEQTVQVGVHGPKRVLVLICDD
A

Sequences:

>Translated_241_residues
MSARDDILGRIRAALGSERARLAAQFPAPAQAKGAGASAAPNANAAFAPDASLSTASSAARGSAISLGDVDLVARFVAKA
QQVSATCTHIATAAGAPAAVDAYLRDAGLADAPLVVAAALDALPWRAHRALPGVDLRRDGLVSVTPSFAAIAETGSVVCL
SSSATPTSLNFVAATHVVLVNRSAIVATMEDAWARVRATIATLPRAVNVITGPSRTADVEQTVQVGVHGPKRVLVLICDD
A
>Mature_240_residues
SARDDILGRIRAALGSERARLAAQFPAPAQAKGAGASAAPNANAAFAPDASLSTASSAARGSAISLGDVDLVARFVAKAQ
QVSATCTHIATAAGAPAAVDAYLRDAGLADAPLVVAAALDALPWRAHRALPGVDLRRDGLVSVTPSFAAIAETGSVVCLS
SSATPTSLNFVAATHVVLVNRSAIVATMEDAWARVRATIATLPRAVNVITGPSRTADVEQTVQVGVHGPKRVLVLICDDA

Specific function: Is essential for L-lactate degradation and allows cells to grow with lactate as the sole carbon source. May also allow cells to utilize an alternative carbon source during biofilm formation, since it contributes to the formation of architecturally complex

COG id: COG1556

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lutC/ykgG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003741
- InterPro:   IPR002698
- InterPro:   IPR022823 [H]

Pfam domain/function: PF02589 DUF162 [H]

EC number: NA

Molecular weight: Translated: 24331; Mature: 24200

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARDDILGRIRAALGSERARLAAQFPAPAQAKGAGASAAPNANAAFAPDASLSTASSAA
CCCHHHHHHHHHHHHCCHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHC
RGSAISLGDVDLVARFVAKAQQVSATCTHIATAAGAPAAVDAYLRDAGLADAPLVVAAAL
CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHH
DALPWRAHRALPGVDLRRDGLVSVTPSFAAIAETGSVVCLSSSATPTSLNFVAATHVVLV
HHCCCHHHHCCCCCCCCCCCEEEECCCHHHHHCCCCEEEEECCCCCCEEEHHHEEEEEEE
NRSAIVATMEDAWARVRATIATLPRAVNVITGPSRTADVEQTVQVGVHGPKRVLVLICDD
ECCEEEEEHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHCCCCCCEEEEEEECC
A
C
>Mature Secondary Structure 
SARDDILGRIRAALGSERARLAAQFPAPAQAKGAGASAAPNANAAFAPDASLSTASSAA
CCHHHHHHHHHHHHCCHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHC
RGSAISLGDVDLVARFVAKAQQVSATCTHIATAAGAPAAVDAYLRDAGLADAPLVVAAAL
CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHH
DALPWRAHRALPGVDLRRDGLVSVTPSFAAIAETGSVVCLSSSATPTSLNFVAATHVVLV
HHCCCHHHHCCCCCCCCCCCEEEECCCHHHHHCCCCEEEEECCCCCCEEEHHHEEEEEEE
NRSAIVATMEDAWARVRATIATLPRAVNVITGPSRTADVEQTVQVGVHGPKRVLVLICDD
ECCEEEEEHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHCCCCCCEEEEEEECC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]