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The map label for this gene is cpaA1

Identifier: 76817950

GI number: 76817950

Start: 1618595

End: 1619134

Strand: Direct

Name: cpaA1

Synonym: BURPS1710b_A1308

Alternate gene names: NA

Gene position: 1618595-1619134 (Clockwise)

Preceding gene: 76818831

Following gene: 76817362

Centisome position: 50.87

GC content: 74.81

Gene sequence:

>540_bases
ATGCTTTCCGCTCTGCCGCCGCAACCGATCCCGCTGTGCGTGACGCTGCTCGCAGTCGTCGCGGCCAGCATCGATCTGGC
GAGCCGGCGCATTCCCAATCGACTGATCGCGCTCGGCCTCGCGGGCGCGCTCGTCGCGCAATGCGCGCTGCCCGGCCCGC
ACACCGGGTTCGCCGCGTGGCTCGCGGGCGCCGCCACAGGCGCCGGCCTGCTGCTGCCGTTCTACCTCGTGCGGGGCATG
GCCGCGGGCGACGTGAAGCTCATGCTCGCGATCGGCGCGTGGGTCGGGCCGACGCTCGCGCTGCACATCGCGCTCGCGAC
ATTCGTCGTCGGCGGCGCATGGGCGCTCGCGGTCGTCGCCGGGCGCGGCCGCTTCCGCAAGCTGCTCGCGAACCTGCGCC
ACCTGTTCGCGGGCGCGGCGCTGCTGCGCGTCGCGTCGGCCGCGCGCGCCGCCCCCGAGATCGACTCGGTCGGGATGCTG
CCTTACGGCGTCGCGATCGCGATCGGCACGCTCGGCGTGCTGTTCGCGGCGGCGGCCTGA

Upstream 100 bases:

>100_bases
GATGTGTGATCTCAAGCCCGCCTGGATGCGCCAGCCCGGCACGCCGGCTGGCGTCACCGAAGCGGTTCATCGAACGACTG
AATTCGACGCGAGGCCTTCC

Downstream 100 bases:

>100_bases
CGCCCGCATGCCGGCCCTCACCCAACGATTGGAGCGACCATGAACCTGGATCAAGCCGAACCGCGACACGACGCGCAGAT
CGCCCATCTGCCGGAGCCGC

Product: type IV prepilin peptidase-like protein

Products: NA

Alternate protein names: Flp Type Pilus Leader Peptidase; Flp Pilus Assembly Leader Peptidase CpaA; Type II Secretory Pathway Prepilin Signal Peptidase PulO; Prepilin Peptidase Transmembrane Protein

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MLSALPPQPIPLCVTLLAVVAASIDLASRRIPNRLIALGLAGALVAQCALPGPHTGFAAWLAGAATGAGLLLPFYLVRGM
AAGDVKLMLAIGAWVGPTLALHIALATFVVGGAWALAVVAGRGRFRKLLANLRHLFAGAALLRVASAARAAPEIDSVGML
PYGVAIAIGTLGVLFAAAA

Sequences:

>Translated_179_residues
MLSALPPQPIPLCVTLLAVVAASIDLASRRIPNRLIALGLAGALVAQCALPGPHTGFAAWLAGAATGAGLLLPFYLVRGM
AAGDVKLMLAIGAWVGPTLALHIALATFVVGGAWALAVVAGRGRFRKLLANLRHLFAGAALLRVASAARAAPEIDSVGML
PYGVAIAIGTLGVLFAAAA
>Mature_179_residues
MLSALPPQPIPLCVTLLAVVAASIDLASRRIPNRLIALGLAGALVAQCALPGPHTGFAAWLAGAATGAGLLLPFYLVRGM
AAGDVKLMLAIGAWVGPTLALHIALATFVVGGAWALAVVAGRGRFRKLLANLRHLFAGAALLRVASAARAAPEIDSVGML
PYGVAIAIGTLGVLFAAAA

Specific function: Unknown

COG id: COG4960

COG function: function code OU; Flp pilus assembly protein, protease CpaA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17956; Mature: 17956

Theoretical pI: Translated: 11.67; Mature: 11.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSALPPQPIPLCVTLLAVVAASIDLASRRIPNRLIALGLAGALVAQCALPGPHTGFAAW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
LAGAATGAGLLLPFYLVRGMAAGDVKLMLAIGAWVGPTLALHIALATFVVGGAWALAVVA
HHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRGRFRKLLANLRHLFAGAALLRVASAARAAPEIDSVGMLPYGVAIAIGTLGVLFAAAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLSALPPQPIPLCVTLLAVVAASIDLASRRIPNRLIALGLAGALVAQCALPGPHTGFAAW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
LAGAATGAGLLLPFYLVRGMAAGDVKLMLAIGAWVGPTLALHIALATFVVGGAWALAVVA
HHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRGRFRKLLANLRHLFAGAALLRVASAARAAPEIDSVGMLPYGVAIAIGTLGVLFAAAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA