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The map label for this gene is copB

Identifier: 76817946

GI number: 76817946

Start: 2441599

End: 2443263

Strand: Direct

Name: copB

Synonym: BURPS1710b_A2008

Alternate gene names: NA

Gene position: 2441599-2443263 (Clockwise)

Preceding gene: 76817321

Following gene: 76819005

Centisome position: 76.74

GC content: 71.47

Gene sequence:

>1665_bases
ATGACGGCGCGCTTCGTTTCCCTCCGGATCGGCGCGGCGGCGGCCGTACTGGCGTTCGCCGCGGGCTGCACGACATTCTC
GCGGGACGGCGGCTTCGGCGCCGTGTCGAGCGCGGCCGCCGAGCGGCTCGGCCAGGACGCGGTGCTGGTGAAGACCGACG
CCGATCGCGATGCCGTGGCGCGTCGCACGCAGGCGCTGCTGTCGAAGCCGCTCGGCATCGACGACGCGGTTCAGATCGCG
CTGCTGAACAACCGCGGCCTGCAGGCTTCGTATGCGGAGCTCGGCCTGTCCGAGGCCGATCTCGTGCAGGCGGGACGGCT
GCCGAACCCCGGCTTCACGTTCAGCCGCACGCATTCGAGCAACGACCTGAGCATCGGCCGCACGTTCTCGATGAGTGTCC
TGAGCATGCTGACGCTGCCGCTCGCGACGAAGATCGAGGGGCGGCGCTTCGAGCAGACCAAGCTCGAGACCGCCGACGCG
ATGCTGAAGGTCGCGGCCGACACGCGCCGCGCGTACGTCGAGGCGGTCGCCGCCGCGCAGGCGGCGACCTACGCGGAGCA
GGTGAAGGATTCGGCGGACGCCGGCGCGGAGCTCGCGCTCCGGATGCGGCGCGCCGGCAACTTCAGCCGGCTTGATTACG
CGCGCGAGCAGGCGTTCTACGCGGACGCGGTCGCGCAGCTCGCGAACGCGCGGCTGCGCGCGGTCGCCGCACGCGAGAAG
CTCACGCGCGCGATGGGGCTGTGGGGCGCGTCGGCCGGCTATGAACTGCCCGAGCGCCTGCCGGAGCTGCCGGCCGAACG
GCCGCGGCTCGACGACGTCGAGCGCTTCGCGATGGACCACCGCCTCGACATCCGGGCCGCGAAGCTGAGGACGCAGGGCG
TCGCGAGCTCGCTCGGGCTCACGCAGGCGACGCGCTTCGTCAACGCGCTCGAACTCGGCTACCTCGACAACTACGAGACC
GACAAGGGGCACGAGCACGGCTACGAGATCAGCGTCGAGATTCCGCTGTTCGACTGGGGCGGCGCGAAAGTCGCGCGCGC
GAAGGCGGCCTACCTGCAATCGGCGAACCGGCTCGCGCAGACGGCGATCGACGCGCGCTCCGAAGTGCGCGAATCGTACG
CGGCGTACGTGACGCGCTACGACATCGCGAAGCACTATCGCGATGAGGTCGTGCCGCTGCGCAAGACGATTTCCGACGAG
ATGCTGCTGCGCTACAACGGCATGCTCGTCAGCGTGTTCGAGCTGCTTGCCGACGCGCGCGATCAGATCGGCGCGGTGAA
CGCCTATATCGATGCGTTGAAGGACTACTGGCTCGCGCAAGCCGATCTGCAGCAGGCGGTGGGCGGGCGTTTGCCGCGCG
GCGCGCAGGCGGCCAGCGAGCCGCCGGCGGCGACGCCGGCTTCCGCGGCCGCCGCCGGCGCGCGCGCCGCGGCGGTGGCC
TCGGGCGCGGCGGCGCCGGCGAGCGAGGCCACGTCGGTGTCGTCGTCCGCGTCCGTGTCCACATCCGCGTCGGCGTCCAT
GCCCGCAACCACGCCCGCATCCACGGCAGCGTCGGCCCCCGCGCTCGCATCGCCTCGCGCGATCGCGACGGCGGTCTCCT
CCCACGCGCACGAGCCGGCTTCGTTATCCGGCGCCGTGCCACTCACGAATTCGAAAGGTCAATGA

Upstream 100 bases:

>100_bases
TCGCGCCGCGGCCGCGCCAGGCGGCCGCGGCGCCCGCCGGGGCGGACGGCGGCGCGGCCGCCGGAGCACACGGCCATGGC
GCGATGCACGGGGGCGCCGA

Downstream 100 bases:

>100_bases
AGATGGTGTCACGTCGAACTTTTCTCGGCGGCTCCGGCGCCGCGCTGCTCGGCGCGGCGCTCGTCAGCAAGGCGGGCGCC
GCGTCGCTGCCCGAAGCGCC

Product: copper tolerance protein

Products: NA

Alternate protein names: Copper lerance Protein; Copper Resistance-Related Lipoprotein; Outer Membrane Efflux Protein Involved In Copper Resistance; Metal Ion Efflux Outer Membrane Protein; Outer Membrane Protein; Copper Resistance-Related Protein; TypeIsecretion System Outer Membrane Chanel Lipoprotein; Copper Resistance Protein; Outer Membrane Protein-Like Protein; Efflux Protein; Outer Membrane Efflux Protein Involved

Number of amino acids: Translated: 554; Mature: 553

Protein sequence:

>554_residues
MTARFVSLRIGAAAAVLAFAAGCTTFSRDGGFGAVSSAAAERLGQDAVLVKTDADRDAVARRTQALLSKPLGIDDAVQIA
LLNNRGLQASYAELGLSEADLVQAGRLPNPGFTFSRTHSSNDLSIGRTFSMSVLSMLTLPLATKIEGRRFEQTKLETADA
MLKVAADTRRAYVEAVAAAQAATYAEQVKDSADAGAELALRMRRAGNFSRLDYAREQAFYADAVAQLANARLRAVAAREK
LTRAMGLWGASAGYELPERLPELPAERPRLDDVERFAMDHRLDIRAAKLRTQGVASSLGLTQATRFVNALELGYLDNYET
DKGHEHGYEISVEIPLFDWGGAKVARAKAAYLQSANRLAQTAIDARSEVRESYAAYVTRYDIAKHYRDEVVPLRKTISDE
MLLRYNGMLVSVFELLADARDQIGAVNAYIDALKDYWLAQADLQQAVGGRLPRGAQAASEPPAATPASAAAAGARAAAVA
SGAAAPASEATSVSSSASVSTSASASMPATTPASTAASAPALASPRAIATAVSSHAHEPASLSGAVPLTNSKGQ

Sequences:

>Translated_554_residues
MTARFVSLRIGAAAAVLAFAAGCTTFSRDGGFGAVSSAAAERLGQDAVLVKTDADRDAVARRTQALLSKPLGIDDAVQIA
LLNNRGLQASYAELGLSEADLVQAGRLPNPGFTFSRTHSSNDLSIGRTFSMSVLSMLTLPLATKIEGRRFEQTKLETADA
MLKVAADTRRAYVEAVAAAQAATYAEQVKDSADAGAELALRMRRAGNFSRLDYAREQAFYADAVAQLANARLRAVAAREK
LTRAMGLWGASAGYELPERLPELPAERPRLDDVERFAMDHRLDIRAAKLRTQGVASSLGLTQATRFVNALELGYLDNYET
DKGHEHGYEISVEIPLFDWGGAKVARAKAAYLQSANRLAQTAIDARSEVRESYAAYVTRYDIAKHYRDEVVPLRKTISDE
MLLRYNGMLVSVFELLADARDQIGAVNAYIDALKDYWLAQADLQQAVGGRLPRGAQAASEPPAATPASAAAAGARAAAVA
SGAAAPASEATSVSSSASVSTSASASMPATTPASTAASAPALASPRAIATAVSSHAHEPASLSGAVPLTNSKGQ
>Mature_553_residues
TARFVSLRIGAAAAVLAFAAGCTTFSRDGGFGAVSSAAAERLGQDAVLVKTDADRDAVARRTQALLSKPLGIDDAVQIAL
LNNRGLQASYAELGLSEADLVQAGRLPNPGFTFSRTHSSNDLSIGRTFSMSVLSMLTLPLATKIEGRRFEQTKLETADAM
LKVAADTRRAYVEAVAAAQAATYAEQVKDSADAGAELALRMRRAGNFSRLDYAREQAFYADAVAQLANARLRAVAAREKL
TRAMGLWGASAGYELPERLPELPAERPRLDDVERFAMDHRLDIRAAKLRTQGVASSLGLTQATRFVNALELGYLDNYETD
KGHEHGYEISVEIPLFDWGGAKVARAKAAYLQSANRLAQTAIDARSEVRESYAAYVTRYDIAKHYRDEVVPLRKTISDEM
LLRYNGMLVSVFELLADARDQIGAVNAYIDALKDYWLAQADLQQAVGGRLPRGAQAASEPPAATPASAAAAGARAAAVAS
GAAAPASEATSVSSSASVSTSASASMPATTPASTAASAPALASPRAIATAVSSHAHEPASLSGAVPLTNSKGQ

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58395; Mature: 58264

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARFVSLRIGAAAAVLAFAAGCTTFSRDGGFGAVSSAAAERLGQDAVLVKTDADRDAVA
CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHH
RRTQALLSKPLGIDDAVQIALLNNRGLQASYAELGLSEADLVQAGRLPNPGFTFSRTHSS
HHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHCCCCHHHHHHHCCCCCCCCEEEECCCC
NDLSIGRTFSMSVLSMLTLPLATKIEGRRFEQTKLETADAMLKVAADTRRAYVEAVAAAQ
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AATYAEQVKDSADAGAELALRMRRAGNFSRLDYAREQAFYADAVAQLANARLRAVAAREK
HHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTRAMGLWGASAGYELPERLPELPAERPRLDDVERFAMDHRLDIRAAKLRTQGVASSLGL
HHHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
TQATRFVNALELGYLDNYETDKGHEHGYEISVEIPLFDWGGAKVARAKAAYLQSANRLAQ
HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
TAIDARSEVRESYAAYVTRYDIAKHYRDEVVPLRKTISDEMLLRYNGMLVSVFELLADAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
DQIGAVNAYIDALKDYWLAQADLQQAVGGRLPRGAQAASEPPAATPASAAAAGARAAAVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHH
SGAAAPASEATSVSSSASVSTSASASMPATTPASTAASAPALASPRAIATAVSSHAHEPA
CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHCCCCC
SLSGAVPLTNSKGQ
CCCCCCCCCCCCCC
>Mature Secondary Structure 
TARFVSLRIGAAAAVLAFAAGCTTFSRDGGFGAVSSAAAERLGQDAVLVKTDADRDAVA
CCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHH
RRTQALLSKPLGIDDAVQIALLNNRGLQASYAELGLSEADLVQAGRLPNPGFTFSRTHSS
HHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHCCCCHHHHHHHCCCCCCCCEEEECCCC
NDLSIGRTFSMSVLSMLTLPLATKIEGRRFEQTKLETADAMLKVAADTRRAYVEAVAAAQ
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AATYAEQVKDSADAGAELALRMRRAGNFSRLDYAREQAFYADAVAQLANARLRAVAAREK
HHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTRAMGLWGASAGYELPERLPELPAERPRLDDVERFAMDHRLDIRAAKLRTQGVASSLGL
HHHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
TQATRFVNALELGYLDNYETDKGHEHGYEISVEIPLFDWGGAKVARAKAAYLQSANRLAQ
HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
TAIDARSEVRESYAAYVTRYDIAKHYRDEVVPLRKTISDEMLLRYNGMLVSVFELLADAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
DQIGAVNAYIDALKDYWLAQADLQQAVGGRLPRGAQAASEPPAATPASAAAAGARAAAVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHH
SGAAAPASEATSVSSSASVSTSASASMPATTPASTAASAPALASPRAIATAVSSHAHEPA
CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHCCCCC
SLSGAVPLTNSKGQ
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA