| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is pvcC [H]
Identifier: 76817901
GI number: 76817901
Start: 2052049
End: 2053533
Strand: Direct
Name: pvcC [H]
Synonym: BURPS1710b_A1681
Alternate gene names: 76817901
Gene position: 2052049-2053533 (Clockwise)
Preceding gene: 76818821
Following gene: 76817861
Centisome position: 64.49
GC content: 67.07
Gene sequence:
>1485_bases ATGACGTTGATGACGGGAAACGACTATCTCGACAGCCTGCGTGACGGGCGCAACGTGTATGTCGGCGGCGAGCGGATCGC CGATGTCGCGTCGCACCGCGCGTTTCGCAACGCGGCGCGCAGCATCGCTTCGCTGTACGACGCATTGCACGGCGAGCATC GCGAGCGGCTGACCGCGCCCGACCGGCACGGGCAGATCACGCACCGCTTCTTCAAGCCGAGCGAATCGCCCGACGATCTG CTTGCCGCGCAGGATGCGATCGAGCTGTGGTCGCGGATGACTTACGGCTTCATGGGCCGCACGCCCGATTACAAGGCCGC GTTCATGTCGGGGCTCGAGGCGGGCGCCGACTATTACGGCGATTTCCGGCAAAACGCGGCCGGCTGGTACAAGCGCTTCG CGGGCAGCGGCCTGTATCTGAATCACGCGATCATCAATCCGCCGCTCGATCGCGGCAAGGCGATTCATGACATGCGCGAC GTGTTCGTGCGCGTCGTCGGCGAGACCGATCGCGGGATCGTCGTGAGCGGCGTGAAGATGCTCGCGACGGCGGGCGCGCT CACCAACGCGACGTTCGTCGCGCCGGTCGCCTCGGCGCTGCTGGAGCCCGGCAAGGCCGACGATTTCGCGATCGTGTTCT TCGCGCGGATGGACAACCCGGGGCTGAGCCTGATGTGCCGGCCGTCGTACGAAGCGGCCGCGACGAGCCCGTTCGACGCG CCGCTGTCGAGCCGTTTCGACGAGAACGACAGCGTGCTGATCTTCGATCGCGCGCTGATTCCATGGGAAGACGTGCTCGT CTATCGCGACGTGAAGCGCGCGACCGGCTTCTACGCGGCGTCGGGTTTCGCGAATCTCTACAACTTCCAGTCGGGCATCC GGCTCGCGGTGAAGCTCGAGCTGATGATCGGCCTGCTGTCGCTCGGCACGCAGGCGAACGGCACGCAATCGTTCCGCGGC ATTCAGGCGGCGCTCGGCGAGCTGGTCTCGCTCCAGCATCTGCTGAAGACGATCACGGCCGCGATGGCGCGCGATCCCGA GCGCACGCCGAGCGGCGTCGTCGTGCCGAAGCTTCAGTATGCGAGCGCGCTGCGGATCCAGGTGCCGCAGATCTGGAAGC GCGTGCGCGAGCTGATGGAGACCGCGCTCGGCGGCTCGCCGCTCGTCACCGTCTCGGGCGCGGCCGATCTGCTCGATCCG CGGGTGAAGGGCCTGATCGACGCGTACTACCGCGGCGCGGCGCTCGAGCCGCAGCAGCGGATCAAGCTCTTCAAGCTGAT CTGGGATGCGACCGGCAGCGAGTTCGGCTCGCGTCATTCGGTCTACGAAACGCATTACTCCGGCAACTTCGACCAGATCC GGCTCGATTCGCTGACATGGGCGACCCGCTCCGGCCAGCTTGCCGACTGCGAGGCGTTCGCGCGGCAGTGCATGGGCGAC TACGACGCGTCGGGCTGGCTGCGCGGCCCCTGGCTGCACGGCTGA
Upstream 100 bases:
>100_bases CCGCCGCTGCGCAATCCGCACCTGTCGAAGCAACCGCACGACGCGGCGGCCGCCGACGCGGCCGCTTCGGCCTGACGCAT TGGTTCAAGGAGGAACGACC
Downstream 100 bases:
>100_bases AGCGCACGCTCGAACCCCTGTCTTTTCAACTCAAAAGGAGCAACCATGTGCGGCATCACCGGATGGATCGATTTCGCCCG CGATCTGCGCAACGAAGCGC
Product: pyoverdin chromophore biosynthetic protein PvcC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MTLMTGNDYLDSLRDGRNVYVGGERIADVASHRAFRNAARSIASLYDALHGEHRERLTAPDRHGQITHRFFKPSESPDDL LAAQDAIELWSRMTYGFMGRTPDYKAAFMSGLEAGADYYGDFRQNAAGWYKRFAGSGLYLNHAIINPPLDRGKAIHDMRD VFVRVVGETDRGIVVSGVKMLATAGALTNATFVAPVASALLEPGKADDFAIVFFARMDNPGLSLMCRPSYEAAATSPFDA PLSSRFDENDSVLIFDRALIPWEDVLVYRDVKRATGFYAASGFANLYNFQSGIRLAVKLELMIGLLSLGTQANGTQSFRG IQAALGELVSLQHLLKTITAAMARDPERTPSGVVVPKLQYASALRIQVPQIWKRVRELMETALGGSPLVTVSGAADLLDP RVKGLIDAYYRGAALEPQQRIKLFKLIWDATGSEFGSRHSVYETHYSGNFDQIRLDSLTWATRSGQLADCEAFARQCMGD YDASGWLRGPWLHG
Sequences:
>Translated_494_residues MTLMTGNDYLDSLRDGRNVYVGGERIADVASHRAFRNAARSIASLYDALHGEHRERLTAPDRHGQITHRFFKPSESPDDL LAAQDAIELWSRMTYGFMGRTPDYKAAFMSGLEAGADYYGDFRQNAAGWYKRFAGSGLYLNHAIINPPLDRGKAIHDMRD VFVRVVGETDRGIVVSGVKMLATAGALTNATFVAPVASALLEPGKADDFAIVFFARMDNPGLSLMCRPSYEAAATSPFDA PLSSRFDENDSVLIFDRALIPWEDVLVYRDVKRATGFYAASGFANLYNFQSGIRLAVKLELMIGLLSLGTQANGTQSFRG IQAALGELVSLQHLLKTITAAMARDPERTPSGVVVPKLQYASALRIQVPQIWKRVRELMETALGGSPLVTVSGAADLLDP RVKGLIDAYYRGAALEPQQRIKLFKLIWDATGSEFGSRHSVYETHYSGNFDQIRLDSLTWATRSGQLADCEAFARQCMGD YDASGWLRGPWLHG >Mature_493_residues TLMTGNDYLDSLRDGRNVYVGGERIADVASHRAFRNAARSIASLYDALHGEHRERLTAPDRHGQITHRFFKPSESPDDLL AAQDAIELWSRMTYGFMGRTPDYKAAFMSGLEAGADYYGDFRQNAAGWYKRFAGSGLYLNHAIINPPLDRGKAIHDMRDV FVRVVGETDRGIVVSGVKMLATAGALTNATFVAPVASALLEPGKADDFAIVFFARMDNPGLSLMCRPSYEAAATSPFDAP LSSRFDENDSVLIFDRALIPWEDVLVYRDVKRATGFYAASGFANLYNFQSGIRLAVKLELMIGLLSLGTQANGTQSFRGI QAALGELVSLQHLLKTITAAMARDPERTPSGVVVPKLQYASALRIQVPQIWKRVRELMETALGGSPLVTVSGAADLLDPR VKGLIDAYYRGAALEPQQRIKLFKLIWDATGSEFGSRHSVYETHYSGNFDQIRLDSLTWATRSGQLADCEAFARQCMGDY DASGWLRGPWLHG
Specific function: Unknown
COG id: COG2368
COG function: function code Q; Aromatic ring hydroxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006091 - InterPro: IPR009075 - InterPro: IPR009100 - InterPro: IPR004925 [H]
Pfam domain/function: PF03241 HpaB [H]
EC number: NA
Molecular weight: Translated: 54426; Mature: 54295
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLMTGNDYLDSLRDGRNVYVGGERIADVASHRAFRNAARSIASLYDALHGEHRERLTAP CEEECCCHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC DRHGQITHRFFKPSESPDDLLAAQDAIELWSRMTYGFMGRTPDYKAAFMSGLEAGADYYG CCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHH DFRQNAAGWYKRFAGSGLYLNHAIINPPLDRGKAIHDMRDVFVRVVGETDRGIVVSGVKM HHHHHHHHHHHHHCCCCEEEECEECCCCHHCCHHHHHHHHHHHHHHCCCCCCEEEHHHHH LATAGALTNATFVAPVASALLEPGKADDFAIVFFARMDNPGLSLMCRPSYEAAATSPFDA HHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCCC PLSSRFDENDSVLIFDRALIPWEDVLVYRDVKRATGFYAASGFANLYNFQSGIRLAVKLE CHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEHHH LMIGLLSLGTQANGTQSFRGIQAALGELVSLQHLLKTITAAMARDPERTPSGVVVPKLQY HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHH ASALRIQVPQIWKRVRELMETALGGSPLVTVSGAADLLDPRVKGLIDAYYRGAALEPQQR HHHHEEECHHHHHHHHHHHHHHCCCCCEEEECCCHHHHCHHHHHHHHHHHCCCCCCHHHH IKLFKLIWDATGSEFGSRHSVYETHYSGNFDQIRLDSLTWATRSGQLADCEAFARQCMGD HHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEECCEEEECCCCCCCHHHHHHHHHCCC YDASGWLRGPWLHG CCCCCCCCCCCCCC >Mature Secondary Structure TLMTGNDYLDSLRDGRNVYVGGERIADVASHRAFRNAARSIASLYDALHGEHRERLTAP EEECCCHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC DRHGQITHRFFKPSESPDDLLAAQDAIELWSRMTYGFMGRTPDYKAAFMSGLEAGADYYG CCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHH DFRQNAAGWYKRFAGSGLYLNHAIINPPLDRGKAIHDMRDVFVRVVGETDRGIVVSGVKM HHHHHHHHHHHHHCCCCEEEECEECCCCHHCCHHHHHHHHHHHHHHCCCCCCEEEHHHHH LATAGALTNATFVAPVASALLEPGKADDFAIVFFARMDNPGLSLMCRPSYEAAATSPFDA HHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCCC PLSSRFDENDSVLIFDRALIPWEDVLVYRDVKRATGFYAASGFANLYNFQSGIRLAVKLE CHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEHHH LMIGLLSLGTQANGTQSFRGIQAALGELVSLQHLLKTITAAMARDPERTPSGVVVPKLQY HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHH ASALRIQVPQIWKRVRELMETALGGSPLVTVSGAADLLDPRVKGLIDAYYRGAALEPQQR HHHHEEECHHHHHHHHHHHHHHCCCCCEEEECCCHHHHCHHHHHHHHHHHCCCCCCHHHH IKLFKLIWDATGSEFGSRHSVYETHYSGNFDQIRLDSLTWATRSGQLADCEAFARQCMGD HHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEECCEEEECCCCCCCHHHHHHHHHCCC YDASGWLRGPWLHG CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10383985; 10984043 [H]