| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is metQ-2 [H]
Identifier: 76817811
GI number: 76817811
Start: 2191384
End: 2192163
Strand: Direct
Name: metQ-2 [H]
Synonym: BURPS1710b_A1802
Alternate gene names: 76817811
Gene position: 2191384-2192163 (Clockwise)
Preceding gene: 76818352
Following gene: 76819242
Centisome position: 68.87
GC content: 65.9
Gene sequence:
>780_bases GTGGCCGGCGGTGCGGTGTGGGCGCTCGCGGCGACGCTCGCGCACGCGGGCGGCCCCGCGCTGATGATCGGCACGATGAG CGGCCCGGATGCGCAGATCTGGGCGGAAGTGACGAAGGTCGCGGCGCGCGACGGGCTCGCGATCAAGGTGATCGAATTCA ACGATTACGTGCAGCCGAACGCGGCGCTCGACGCGGGCGATCTCGACGCGAACGGCTTCCAGCACCAGCCGTTCCTCGAC AGCCAGATCCGGCAGCGCGGCTACAGGATCGTGAACGTCGGGCTCACGTACACGTCGCCGATGGGCTTTTATTCGAAGCG GCTCAAGTCGCTGAAGGATCTGCCCGTCGGCGCGAAAGTCGGGATCCAGAACGATCCGTCGAACGGCAACCGCGCGCTGT TGCTGCTGCAGAAGTACGGCATCGTGAAGCTGAAGCCGGGCGCCGGCGTGAACGGCGTGAACGCGACGCCGCTCGACGTC GCCGAGAATCCGCGCAAGATCCGGCTCGTCGAGCTCGATGCCGCGCAATTGCCGCGCGCGCTACCGGACCTCGACGCGGC GTCGATCAACACGGACTACGCGGTGAAGGCGGGGCTGTCGCCGGTGAAGGACGCGATCGCGATCGAGGATCTGAAGGGAC CGTATGCGAACCTGATCGCGGTGCGCGCGCAGGACAAGGACAAGCCCTGGGTGAAGAAGCTCGTCGCCGCGTACGAATCG AACGACGTGCGCAAGTTCATCGAAACGAAATTCAACGGCGCGATCATTCCGGCGTTCTGA
Upstream 100 bases:
>100_bases CTTGGTTTGTCCGTTCGGCGCCACATGCGACGATGCGCGCTTTGCACATCATGGAACGTGAGGACAAGCGATGCGACGAT TGGCTTCGATCATTCGCCGG
Downstream 100 bases:
>100_bases CGAAACGGCCGACAGGGGCGGGCGGCGCATGGCGCGTGTCCGAAGGCGGCGCGTCGCGCGCGGCTCGGTTCGCCGCGGCG CGCGCGCATCGACGAATCCA
Product: D-methionine-binding lipoprotein metQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MAGGAVWALAATLAHAGGPALMIGTMSGPDAQIWAEVTKVAARDGLAIKVIEFNDYVQPNAALDAGDLDANGFQHQPFLD SQIRQRGYRIVNVGLTYTSPMGFYSKRLKSLKDLPVGAKVGIQNDPSNGNRALLLLQKYGIVKLKPGAGVNGVNATPLDV AENPRKIRLVELDAAQLPRALPDLDAASINTDYAVKAGLSPVKDAIAIEDLKGPYANLIAVRAQDKDKPWVKKLVAAYES NDVRKFIETKFNGAIIPAF
Sequences:
>Translated_259_residues MAGGAVWALAATLAHAGGPALMIGTMSGPDAQIWAEVTKVAARDGLAIKVIEFNDYVQPNAALDAGDLDANGFQHQPFLD SQIRQRGYRIVNVGLTYTSPMGFYSKRLKSLKDLPVGAKVGIQNDPSNGNRALLLLQKYGIVKLKPGAGVNGVNATPLDV AENPRKIRLVELDAAQLPRALPDLDAASINTDYAVKAGLSPVKDAIAIEDLKGPYANLIAVRAQDKDKPWVKKLVAAYES NDVRKFIETKFNGAIIPAF >Mature_258_residues AGGAVWALAATLAHAGGPALMIGTMSGPDAQIWAEVTKVAARDGLAIKVIEFNDYVQPNAALDAGDLDANGFQHQPFLDS QIRQRGYRIVNVGLTYTSPMGFYSKRLKSLKDLPVGAKVGIQNDPSNGNRALLLLQKYGIVKLKPGAGVNGVNATPLDVA ENPRKIRLVELDAAQLPRALPDLDAASINTDYAVKAGLSPVKDAIAIEDLKGPYANLIAVRAQDKDKPWVKKLVAAYESN DVRKFIETKFNGAIIPAF
Specific function: This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system [H]
COG id: COG1464
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nlpA lipoprotein family [H]
Homologues:
Organism=Escherichia coli, GI1786396, Length=263, Percent_Identity=46.3878326996198, Blast_Score=222, Evalue=2e-59, Organism=Escherichia coli, GI1790093, Length=243, Percent_Identity=41.9753086419753, Blast_Score=192, Evalue=3e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004872 - InterPro: IPR004478 [H]
Pfam domain/function: PF03180 Lipoprotein_9 [H]
EC number: NA
Molecular weight: Translated: 27672; Mature: 27541
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGGAVWALAATLAHAGGPALMIGTMSGPDAQIWAEVTKVAARDGLAIKVIEFNDYVQPN CCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCC AALDAGDLDANGFQHQPFLDSQIRQRGYRIVNVGLTYTSPMGFYSKRLKSLKDLPVGAKV CCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCEE GIQNDPSNGNRALLLLQKYGIVKLKPGAGVNGVNATPLDVAENPRKIRLVELDAAQLPRA CCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECHHHCCCC LPDLDAASINTDYAVKAGLSPVKDAIAIEDLKGPYANLIAVRAQDKDKPWVKKLVAAYES CCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHCC NDVRKFIETKFNGAIIPAF CHHHHHHHHCCCCEEECCC >Mature Secondary Structure AGGAVWALAATLAHAGGPALMIGTMSGPDAQIWAEVTKVAARDGLAIKVIEFNDYVQPN CCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCC AALDAGDLDANGFQHQPFLDSQIRQRGYRIVNVGLTYTSPMGFYSKRLKSLKDLPVGAKV CCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCEE GIQNDPSNGNRALLLLQKYGIVKLKPGAGVNGVNATPLDVAENPRKIRLVELDAAQLPRA CCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECHHHCCCC LPDLDAASINTDYAVKAGLSPVKDAIAIEDLKGPYANLIAVRAQDKDKPWVKKLVAAYES CCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHCC NDVRKFIETKFNGAIIPAF CHHHHHHHHCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]