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The map label for this gene is yqhC [C]

Identifier: 76817542

GI number: 76817542

Start: 2306287

End: 2307171

Strand: Direct

Name: yqhC [C]

Synonym: BURPS1710b_A1891

Alternate gene names: 76817542

Gene position: 2306287-2307171 (Clockwise)

Preceding gene: 76819390

Following gene: 76819087

Centisome position: 72.48

GC content: 69.15

Gene sequence:

>885_bases
ATGATGACTTTGCTTGCCGTGCCGCCCGAGAAGTTGTCCGCCGCATCGGCCGCCTCCACGGCCGCCTCCACGGCCGCCGG
CCCGACGCCGGCGGCCGGGAACGGCGCGTGTGCTTCGCCGCCGTCGTCGGGCGCCGCACTCGAAGGCGACGACGACGGCT
TCGCCGCGATGCTCGCGCACTTCGCGCAATTGGAGCCGGTGTTCGACGCGCTGCCCGACGTCGCGTTCTTCGTGAAGGAC
GTGCGCGCGCGCTACGCGCTCGTGAACCGCACGCTCGCGCAGCGCTGCGGCTACAAGGACAAGCGCGACCTGTACGGCAA
GGCCGCGGACGAAGTCTTTCCGCGCCGCTTCGGGCGCAGCTACGTCGAGCAGGATCTGACGATCATCGCGGGCGGCCGGC
AACTGACCGATCAACTGGAGCTGCATCTGTACTCGGGCCGCCAGCCCGGCTGGTGCCTGACGTGCAAGGAGCCGCTGCGC
AACGCGCAGGGGAGGATCGTCGGGATCGCGGGGCTTTCGCGCGACCTGCGCGCGCACGAGAGCTCGCATCCGGCGTACAG
CCGCATCGCGGACGTCGTGCGCTACATCCACGCGCATTACGTGCAGCCGCTGAACCTGAAGCATCTCGCCGGGATGGCGG
GCATGTCGGTTGCGCAGCTCGAGCGCTATTTTCACAAGGTGTTTCATCTGACGCCGCGGCAGATGCTGCTGAAGGCGCGG
CTCGACGCGGCCACCGCGCTGCTCGTCACGCACGACAAGGTGACGGACGTCGCCGCGCTGTGCGGCTACACCGATCACAG
CGCGTTCACGCGGCAGTTCAAGGCGACGGTCGGCGTGACGCCGACCGAGTATCGGCTGATGCTGCAGGAGGGGCGGGGGG
CTTGA

Upstream 100 bases:

>100_bases
GCCCGCCGTTCTCGCCCGCGCGCATCGACACGCTGCTCGCCGCGTCCGACGACGCGCTCCTATAATCGACGCCAACCGTG
TGACGACGCGCGAGACCCGT

Downstream 100 bases:

>100_bases
CGCGCAGGCGCCGCGCCGGCCGCCGGGCGTGCCCGCGCGGAGCGGACGGCCGACGATCCGGGGGCCCGGGCGCGTGGCTC
GGCGCCGAGCGCGCAAAAGC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Transcriptional Regulator With PAS/PAC Sensors AraC Family; Transcription Regulator; AraC/XylS Family Transcriptional Regulator; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator AraC; PAS Fold-4 Domain Protein; PAS Sensor Protein; AraC Family Regulatory Protein; Helix-Turn-Helix Domain-Containing Protein; Proline Utilization Regulator; AraC Family Transcription Regulator; Regulatory Protein; Transcriptional Regulator Protein AraC Family; Transcriptional Regulator Transcription Regulator Protein; PAS Fold Family Protein

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MMTLLAVPPEKLSAASAASTAASTAAGPTPAAGNGACASPPSSGAALEGDDDGFAAMLAHFAQLEPVFDALPDVAFFVKD
VRARYALVNRTLAQRCGYKDKRDLYGKAADEVFPRRFGRSYVEQDLTIIAGGRQLTDQLELHLYSGRQPGWCLTCKEPLR
NAQGRIVGIAGLSRDLRAHESSHPAYSRIADVVRYIHAHYVQPLNLKHLAGMAGMSVAQLERYFHKVFHLTPRQMLLKAR
LDAATALLVTHDKVTDVAALCGYTDHSAFTRQFKATVGVTPTEYRLMLQEGRGA

Sequences:

>Translated_294_residues
MMTLLAVPPEKLSAASAASTAASTAAGPTPAAGNGACASPPSSGAALEGDDDGFAAMLAHFAQLEPVFDALPDVAFFVKD
VRARYALVNRTLAQRCGYKDKRDLYGKAADEVFPRRFGRSYVEQDLTIIAGGRQLTDQLELHLYSGRQPGWCLTCKEPLR
NAQGRIVGIAGLSRDLRAHESSHPAYSRIADVVRYIHAHYVQPLNLKHLAGMAGMSVAQLERYFHKVFHLTPRQMLLKAR
LDAATALLVTHDKVTDVAALCGYTDHSAFTRQFKATVGVTPTEYRLMLQEGRGA
>Mature_294_residues
MMTLLAVPPEKLSAASAASTAASTAAGPTPAAGNGACASPPSSGAALEGDDDGFAAMLAHFAQLEPVFDALPDVAFFVKD
VRARYALVNRTLAQRCGYKDKRDLYGKAADEVFPRRFGRSYVEQDLTIIAGGRQLTDQLELHLYSGRQPGWCLTCKEPLR
NAQGRIVGIAGLSRDLRAHESSHPAYSRIADVVRYIHAHYVQPLNLKHLAGMAGMSVAQLERYFHKVFHLTPRQMLLKAR
LDAATALLVTHDKVTDVAALCGYTDHSAFTRQFKATVGVTPTEYRLMLQEGRGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31897; Mature: 31897

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTLLAVPPEKLSAASAASTAASTAAGPTPAAGNGACASPPSSGAALEGDDDGFAAMLAH
CCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
FAQLEPVFDALPDVAFFVKDVRARYALVNRTLAQRCGYKDKRDLYGKAADEVFPRRFGRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
YVEQDLTIIAGGRQLTDQLELHLYSGRQPGWCLTCKEPLRNAQGRIVGIAGLSRDLRAHE
HHHCCCEEEECCHHHHHHHHHHEECCCCCCEEEECHHHHCCCCCCEEEECCCCHHHHHHC
SSHPAYSRIADVVRYIHAHYVQPLNLKHLAGMAGMSVAQLERYFHKVFHLTPRQMLLKAR
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHH
LDAATALLVTHDKVTDVAALCGYTDHSAFTRQFKATVGVTPTEYRLMLQEGRGA
HHHHHEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MMTLLAVPPEKLSAASAASTAASTAAGPTPAAGNGACASPPSSGAALEGDDDGFAAMLAH
CCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
FAQLEPVFDALPDVAFFVKDVRARYALVNRTLAQRCGYKDKRDLYGKAADEVFPRRFGRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
YVEQDLTIIAGGRQLTDQLELHLYSGRQPGWCLTCKEPLRNAQGRIVGIAGLSRDLRAHE
HHHCCCEEEECCHHHHHHHHHHEECCCCCCEEEECHHHHCCCCCCEEEECCCCHHHHHHC
SSHPAYSRIADVVRYIHAHYVQPLNLKHLAGMAGMSVAQLERYFHKVFHLTPRQMLLKAR
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHH
LDAATALLVTHDKVTDVAALCGYTDHSAFTRQFKATVGVTPTEYRLMLQEGRGA
HHHHHEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA