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The map label for this gene is 162210110

Identifier: 162210110

GI number: 162210110

Start: 881599

End: 882315

Strand: Direct

Name: 162210110

Synonym: BURPS1710b_A0685

Alternate gene names: NA

Gene position: 881599-882315 (Clockwise)

Preceding gene: 76818090

Following gene: 76817792

Centisome position: 27.71

GC content: 74.2

Gene sequence:

>717_bases
ATGGCTTTTTGGCTGAAAAACCGGCAGATTCCGCTCGTCGACGATCTGCGCATCGACGCGCCGCACGGCGTGCTGCGCCG
CGACGCGTTCGAGACGGTTCAGGCGCTCGGCGCCGCGCTCGACGCGCTCGCGGCGGAGCGCGACGCGGTGCTGCGCGCGG
CGCGCGACGATGCCGAGCGAATCGCCGCCGGCGCGCGCGCGCAAGCCGACGCGCTCGTCGAAGCCGCGCGGCGCGAGCAC
GACAGCGCCTACGCGCGCGGCTACGACGCGGGCCGCGCGCAGGCGATCGCCGACTGGCACGCGCGGGCGGCCGATTCGTT
CGAGCAGGAGCGGCGCGTGCGCGACCGGATGCGCGAGCGGCTCGCGGAGCTCGTCGCCGCGGCCGTCCAGCAGATGGTGC
ATACGGAGGATGCGCGCGGCCTCTTCGCGCGCGCGGCGCAGACGATCGAGCGCATCGTCGCCGGCGCGAGCTATCTGACG
GTGCGCGTGTGCGACGCCGATTACGACGCGGCGCGCGAGCAGTTCGGCCTGCTTGCCGACGCATGGCGCCGGCAAGGGCG
CAACGTGCCCGTCGATGTCGTCGTCGAGCCGCGCGTCGCGCGCGGCACCTGCGTGTGCGAATCCGATTTCGGCACCGTCG
ACGCGAGCCTCGATACCCAACTGAACGCGATCCGCGCGGCGCTCGCCCGCGCGCTCGACGACGCGGGGCGCGCATGA

Upstream 100 bases:

>100_bases
CGCGCGAGCCCGCGCGCGCGCCGTGGCTCGAGCGCGCGGCGGCGGACGCGGACGGCGCGATGCTGCTCGCGCGCGTGCCG
TCGCTGTTTCCGGAGTGGAC

Downstream 100 bases:

>100_bases
ACGCGCTGGCCGATCTGTCCCGCGTCGCCGACGCGATGGCCGCCCGACTCGCGATCGAGCCCGCCGTCGGCATGACCGGC
AAGGTGCTCGAAGTGATCGG

Product: type III secretion system protein HrpB

Products: NA

Alternate protein names: Type III Secretion System Protein HrpB; Type III Secretion Apparatus Protein HrpE/YscL Family; TypeIII Secretion Cytoplasmic Protein SctL; Flagellar Biosynthesis/Type III Secretory Pathway Protein

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MAFWLKNRQIPLVDDLRIDAPHGVLRRDAFETVQALGAALDALAAERDAVLRAARDDAERIAAGARAQADALVEAARREH
DSAYARGYDAGRAQAIADWHARAADSFEQERRVRDRMRERLAELVAAAVQQMVHTEDARGLFARAAQTIERIVAGASYLT
VRVCDADYDAAREQFGLLADAWRRQGRNVPVDVVVEPRVARGTCVCESDFGTVDASLDTQLNAIRAALARALDDAGRA

Sequences:

>Translated_238_residues
MAFWLKNRQIPLVDDLRIDAPHGVLRRDAFETVQALGAALDALAAERDAVLRAARDDAERIAAGARAQADALVEAARREH
DSAYARGYDAGRAQAIADWHARAADSFEQERRVRDRMRERLAELVAAAVQQMVHTEDARGLFARAAQTIERIVAGASYLT
VRVCDADYDAAREQFGLLADAWRRQGRNVPVDVVVEPRVARGTCVCESDFGTVDASLDTQLNAIRAALARALDDAGRA
>Mature_237_residues
AFWLKNRQIPLVDDLRIDAPHGVLRRDAFETVQALGAALDALAAERDAVLRAARDDAERIAAGARAQADALVEAARREHD
SAYARGYDAGRAQAIADWHARAADSFEQERRVRDRMRERLAELVAAAVQQMVHTEDARGLFARAAQTIERIVAGASYLTV
RVCDADYDAAREQFGLLADAWRRQGRNVPVDVVVEPRVARGTCVCESDFGTVDASLDTQLNAIRAALARALDDAGRA

Specific function: Unknown

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26062; Mature: 25931

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFWLKNRQIPLVDDLRIDAPHGVLRRDAFETVQALGAALDALAAERDAVLRAARDDAER
CCEECCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAAGARAQADALVEAARREHDSAYARGYDAGRAQAIADWHARAADSFEQERRVRDRMRER
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAELVAAAVQQMVHTEDARGLFARAAQTIERIVAGASYLTVRVCDADYDAAREQFGLLAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHH
AWRRQGRNVPVDVVVEPRVARGTCVCESDFGTVDASLDTQLNAIRAALARALDDAGRA
HHHHCCCCCCEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AFWLKNRQIPLVDDLRIDAPHGVLRRDAFETVQALGAALDALAAERDAVLRAARDDAER
CEECCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAAGARAQADALVEAARREHDSAYARGYDAGRAQAIADWHARAADSFEQERRVRDRMRER
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAELVAAAVQQMVHTEDARGLFARAAQTIERIVAGASYLTVRVCDADYDAAREQFGLLAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHH
AWRRQGRNVPVDVVVEPRVARGTCVCESDFGTVDASLDTQLNAIRAALARALDDAGRA
HHHHCCCCCCEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA