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The map label for this gene is gcp [H]

Identifier: 162210103

GI number: 162210103

Start: 1096116

End: 1097156

Strand: Direct

Name: gcp [H]

Synonym: BURPS1710b_A0839

Alternate gene names: 162210103

Gene position: 1096116-1097156 (Clockwise)

Preceding gene: 76818194

Following gene: 76819137

Centisome position: 34.45

GC content: 70.89

Gene sequence:

>1041_bases
ATGCTCGTTCTCGGCATCGAAAGCTCCTGCGACGAAACCGGCCTCGCGCTCTACGACACCGAGCGCGGCCTGCTCGCGCA
CGCGCTTCACTCGCAGATCGCGATGCACCGCGAATACGGCGGTGTCGTTCCCGAGCTCGCGTCGCGCGACCACATTCGCC
GCGCGCTGCCGCTGCTCGAAGAGGTGCTCGCCGCAAGCGGCGCGCGCCGCGACGACATCGACGCGATCGCGTTCACGCAG
GGGCCCGGCCTCGCGGGCGCGCTGCTCGTCGGCGCGAGCATCGCGAACGCGCTCGCGTTCGCGTGGGACAAGCCGACCAT
CGGCATCCACCACCTCGAAGGGCATCTGCTGTCGCCGCTGCTCGTCGCCGAGCCGCCGCCGTTTCCGTTCGTCGCGCTGC
TCGTGTCGGGCGGCCATACGCAACTGATGCGCGTGAGCGACGTCGGCGTCTACGAGACGCTCGGCGAGACGCTCGACGAT
GCCGCCGGCGAAGCGTTCGACAAGACCGCGAAGCTGCTCGGCCTCGGCTATCCGGGCGGGCCGGAGGTATCGAGGCTCGC
GGAAGCCGGCACCCCGGGCGCGGTCGTGCTGCCGCGGCCGATGCTTCATTCGGGGGATCTCGACTTCAGCTTCAGCGGGC
TGAAGACCGCCGTGCTCACGCAAATGAAGAAGCTCGAAGCGGCGCACGCGGGCGGCGCCGTGCTCGAACGAGCGAAGGCG
GATTTCGCGCGCGGCTTCGTCGACGCGGCCGTCGACGTGCTCGTCGCGAAGTCGCTCGCCGCGTTGAAGGCGACGCGGCT
CAAGCGGCTCGTCGTCGCCGGCGGCGTGGGCGCGAACCGGCAATTGCGCGCGGCGCTGTCGGCCGCCGCCCAAAAGCGCG
GCTTCGACGTCCATTATCCCGATCTCGCGCTCTGCACCGACAACGGCGCGATGATCGCGCTCGCGGGCGCGCTGCGGCTC
GCGCGCTGGCCGTCGCAGGCGAGCCGCGATTACGCGTTCACGGTGAAGCCGCGCTGGGATCTCGCGTCGCTCGCGCGATA
G

Upstream 100 bases:

>100_bases
GCGCCGGCTGGCGAAGCGGCCGCGCTGTTATACTTTTCTGTTACGTTGATTTTCCGGCCGTGTGCGCACGCGCGCGTCGA
TGCGGCCGCCGCACACCATC

Downstream 100 bases:

>100_bases
CGCGCGAAGCACGACGAGCCCGCCATACGGAGTACGGAGCCGACGCGGCGCGCGGCGGAGCCGAGGCCGCAACGCGCGCG
TGCCTGCTCTCGGGCCCGCC

Product: putative DNA-binding/iron metalloprotein/AP endonuclease

Products: NA

Alternate protein names: Glycoprotease [H]

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MLVLGIESSCDETGLALYDTERGLLAHALHSQIAMHREYGGVVPELASRDHIRRALPLLEEVLAASGARRDDIDAIAFTQ
GPGLAGALLVGASIANALAFAWDKPTIGIHHLEGHLLSPLLVAEPPPFPFVALLVSGGHTQLMRVSDVGVYETLGETLDD
AAGEAFDKTAKLLGLGYPGGPEVSRLAEAGTPGAVVLPRPMLHSGDLDFSFSGLKTAVLTQMKKLEAAHAGGAVLERAKA
DFARGFVDAAVDVLVAKSLAALKATRLKRLVVAGGVGANRQLRAALSAAAQKRGFDVHYPDLALCTDNGAMIALAGALRL
ARWPSQASRDYAFTVKPRWDLASLAR

Sequences:

>Translated_346_residues
MLVLGIESSCDETGLALYDTERGLLAHALHSQIAMHREYGGVVPELASRDHIRRALPLLEEVLAASGARRDDIDAIAFTQ
GPGLAGALLVGASIANALAFAWDKPTIGIHHLEGHLLSPLLVAEPPPFPFVALLVSGGHTQLMRVSDVGVYETLGETLDD
AAGEAFDKTAKLLGLGYPGGPEVSRLAEAGTPGAVVLPRPMLHSGDLDFSFSGLKTAVLTQMKKLEAAHAGGAVLERAKA
DFARGFVDAAVDVLVAKSLAALKATRLKRLVVAGGVGANRQLRAALSAAAQKRGFDVHYPDLALCTDNGAMIALAGALRL
ARWPSQASRDYAFTVKPRWDLASLAR
>Mature_346_residues
MLVLGIESSCDETGLALYDTERGLLAHALHSQIAMHREYGGVVPELASRDHIRRALPLLEEVLAASGARRDDIDAIAFTQ
GPGLAGALLVGASIANALAFAWDKPTIGIHHLEGHLLSPLLVAEPPPFPFVALLVSGGHTQLMRVSDVGVYETLGETLDD
AAGEAFDKTAKLLGLGYPGGPEVSRLAEAGTPGAVVLPRPMLHSGDLDFSFSGLKTAVLTQMKKLEAAHAGGAVLERAKA
DFARGFVDAAVDVLVAKSLAALKATRLKRLVVAGGVGANRQLRAALSAAAQKRGFDVHYPDLALCTDNGAMIALAGALRL
ARWPSQASRDYAFTVKPRWDLASLAR

Specific function: Could Be A Metalloprotease. [C]

COG id: COG0533

COG function: function code O; Metal-dependent proteases with possible chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Homo sapiens, GI116812636, Length=336, Percent_Identity=36.3095238095238, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI8923380, Length=315, Percent_Identity=30.4761904761905, Blast_Score=128, Evalue=9e-30,
Organism=Escherichia coli, GI1789445, Length=344, Percent_Identity=57.2674418604651, Blast_Score=388, Evalue=1e-109,
Organism=Caenorhabditis elegans, GI17557464, Length=334, Percent_Identity=32.0359281437126, Blast_Score=142, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI71995670, Length=348, Percent_Identity=30.1724137931034, Blast_Score=122, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6320099, Length=343, Percent_Identity=33.5276967930029, Blast_Score=163, Evalue=4e-41,
Organism=Saccharomyces cerevisiae, GI6322891, Length=347, Percent_Identity=26.8011527377522, Blast_Score=110, Evalue=3e-25,
Organism=Drosophila melanogaster, GI20129063, Length=352, Percent_Identity=33.8068181818182, Blast_Score=168, Evalue=4e-42,
Organism=Drosophila melanogaster, GI21357207, Length=324, Percent_Identity=29.320987654321, Blast_Score=128, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022450
- InterPro:   IPR000905
- InterPro:   IPR017861 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: =3.4.24.57 [H]

Molecular weight: Translated: 36337; Mature: 36337

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVLGIESSCDETGLALYDTERGLLAHALHSQIAMHREYGGVVPELASRDHIRRALPLLE
CEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
EVLAASGARRDDIDAIAFTQGPGLAGALLVGASIANALAFAWDKPTIGIHHLEGHLLSPL
HHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHCCE
LVAEPPPFPFVALLVSGGHTQLMRVSDVGVYETLGETLDDAAGEAFDKTAKLLGLGYPGG
EECCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PEVSRLAEAGTPGAVVLPRPMLHSGDLDFSFSGLKTAVLTQMKKLEAAHAGGAVLERAKA
CHHHHHHHCCCCCEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
DFARGFVDAAVDVLVAKSLAALKATRLKRLVVAGGVGANRQLRAALSAAAQKRGFDVHYP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCC
DLALCTDNGAMIALAGALRLARWPSQASRDYAFTVKPRWDLASLAR
CEEEEECCCCEEEHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHCC
>Mature Secondary Structure
MLVLGIESSCDETGLALYDTERGLLAHALHSQIAMHREYGGVVPELASRDHIRRALPLLE
CEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
EVLAASGARRDDIDAIAFTQGPGLAGALLVGASIANALAFAWDKPTIGIHHLEGHLLSPL
HHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHCCE
LVAEPPPFPFVALLVSGGHTQLMRVSDVGVYETLGETLDDAAGEAFDKTAKLLGLGYPGG
EECCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PEVSRLAEAGTPGAVVLPRPMLHSGDLDFSFSGLKTAVLTQMKKLEAAHAGGAVLERAKA
CHHHHHHHCCCCCEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
DFARGFVDAAVDVLVAKSLAALKATRLKRLVVAGGVGANRQLRAALSAAAQKRGFDVHYP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCC
DLALCTDNGAMIALAGALRLARWPSQASRDYAFTVKPRWDLASLAR
CEEEEECCCCEEEHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA