| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75910003
Identifier: 75910003
GI number: 75910003
Start: 4734283
End: 4735290
Strand: Direct
Name: 75910003
Synonym: Ava_3799
Alternate gene names: NA
Gene position: 4734283-4735290 (Clockwise)
Preceding gene: 75910002
Following gene: 75910004
Centisome position: 74.37
GC content: 34.72
Gene sequence:
>1008_bases ATGACAACTACACCAAGCACTACCATAAATACAAAAATAATTCCTTTTAATTCTCAGTTAAATGCTCCTTTAACCAAACA AGAAATCAATGTTTTACAAATTAATTTAGGTAAACGCTGTAATCTTGCTTGTACACACTGTCATGTTGAAGCTAGTCCCA AACGTACAGAAGAGTTATCAGCAGAAATCTGCGAACAATTAATCGAGGTAATTCATCGATTTCCGCAAATTAAAATTGTC GATTTAACTGGCGGCGCACCAGAGATGAACTATGGATTTCAGCCATTAGTAGCAGCCGCACGTCAACATAATAAACAGGT AATTGTCCGTTCTAATTTAACTATTTATTTTGTGGAGGGCTTTAAATATTTACCTGAATACTTTGCTGCCAACAAAATCA GAATTGTAGCATCCATGCCTTGTTACCTAGCGGATAATGTTGATAAAATGCGTGGTGTAGGTGTATTTGATGATTCAATT AAAGCTTTACAATGGCTAAATCAAGTTGGTTATGGAATAGACCCCAGTTTAGTTTTGGATTTGGTTTATAATCCCCAACT ACCTACAAGTGAAAAATTTTCCCTAACTCCTGAACAAAGTAAATTAGAGCAAGATTACAAAACTTTCTTACAAAAACATT TCCGTATTGAATTTAACAATCTGTTCACTATTACTAACTTACCAGTTGGTAGAACTAAACTCTATTTAGAACGGAAAAAA CTAGAGACCAGTTATTTGCACTTTTTAGAATTGCATTTCAATCCTCATACGGTAGGAAATTTAATGTGTCGCAATCAATT ATCTGTAGACTATCTCGGTAATATATATGATTGTGATTTTAATCAGATGATGAATTTACCAGCGAAAACTCATAACGGTG AAACTCTGACTGTTGCTAAATTAATTGAGGCTGGTAGTTTGGATCTGATTAATGAAATTCAAACTGCAAACTATTGCTAT GGTTGTACTGCTGGTTGTGGTTCTAGTTGCGGTGGCGCTTTGGTGTGA
Upstream 100 bases:
>100_bases CAACTTACCTATTGCCACCATTATTGGTGGTATCACCTATAGACTATTACAAGGTTAGCAACATCTTCAATATCTTAACT TATTCCAGGAATAGTTATCA
Downstream 100 bases:
>100_bases CAGGTAAGACTAAGCCACAGATAATCGCTCTATGTCAGAGGCTATTTATAAAGTAAATCTAAAAGTGAGTATAAAAGTAA GCTTGGAGGTATAGGATACA
Product: radical SAM family protein
Products: NA
Alternate protein names: Radical SAM Domain-Containing Protein; Fe-S Oxidoreductase; L-Asparaginase II; Radical SAM Superfamily Protein; Radical SAM Family Protein; Fe-S Oxidoreductases; NifB/MoaA Family Fe-S Oxidoreductase; Fe-S Oxidoreductase Of MoaA/NifB/PqqE Family
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MTTTPSTTINTKIIPFNSQLNAPLTKQEINVLQINLGKRCNLACTHCHVEASPKRTEELSAEICEQLIEVIHRFPQIKIV DLTGGAPEMNYGFQPLVAAARQHNKQVIVRSNLTIYFVEGFKYLPEYFAANKIRIVASMPCYLADNVDKMRGVGVFDDSI KALQWLNQVGYGIDPSLVLDLVYNPQLPTSEKFSLTPEQSKLEQDYKTFLQKHFRIEFNNLFTITNLPVGRTKLYLERKK LETSYLHFLELHFNPHTVGNLMCRNQLSVDYLGNIYDCDFNQMMNLPAKTHNGETLTVAKLIEAGSLDLINEIQTANYCY GCTAGCGSSCGGALV
Sequences:
>Translated_335_residues MTTTPSTTINTKIIPFNSQLNAPLTKQEINVLQINLGKRCNLACTHCHVEASPKRTEELSAEICEQLIEVIHRFPQIKIV DLTGGAPEMNYGFQPLVAAARQHNKQVIVRSNLTIYFVEGFKYLPEYFAANKIRIVASMPCYLADNVDKMRGVGVFDDSI KALQWLNQVGYGIDPSLVLDLVYNPQLPTSEKFSLTPEQSKLEQDYKTFLQKHFRIEFNNLFTITNLPVGRTKLYLERKK LETSYLHFLELHFNPHTVGNLMCRNQLSVDYLGNIYDCDFNQMMNLPAKTHNGETLTVAKLIEAGSLDLINEIQTANYCY GCTAGCGSSCGGALV >Mature_334_residues TTTPSTTINTKIIPFNSQLNAPLTKQEINVLQINLGKRCNLACTHCHVEASPKRTEELSAEICEQLIEVIHRFPQIKIVD LTGGAPEMNYGFQPLVAAARQHNKQVIVRSNLTIYFVEGFKYLPEYFAANKIRIVASMPCYLADNVDKMRGVGVFDDSIK ALQWLNQVGYGIDPSLVLDLVYNPQLPTSEKFSLTPEQSKLEQDYKTFLQKHFRIEFNNLFTITNLPVGRTKLYLERKKL ETSYLHFLELHFNPHTVGNLMCRNQLSVDYLGNIYDCDFNQMMNLPAKTHNGETLTVAKLIEAGSLDLINEIQTANYCYG CTAGCGSSCGGALV
Specific function: Unknown
COG id: COG0535
COG function: function code R; Predicted Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37712; Mature: 37581
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTPSTTINTKIIPFNSQLNAPLTKQEINVLQINLGKRCNLACTHCHVEASPKRTEELS CCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCHHHHHH AEICEQLIEVIHRFPQIKIVDLTGGAPEMNYGFQPLVAAARQHNKQVIVRSNLTIYFVEG HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCEEEEECC FKYLPEYFAANKIRIVASMPCYLADNVDKMRGVGVFDDSIKALQWLNQVGYGIDPSLVLD HHHHHHHHCCCEEEEEEECCCHHHCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHEEE LVYNPQLPTSEKFSLTPEQSKLEQDYKTFLQKHFRIEFNNLFTITNLPVGRTKLYLERKK EEECCCCCCCCCEECCCCHHHHHHHHHHHHHHHHEEEECCEEEEECCCCCCCEEEEEHHH LETSYLHFLELHFNPHTVGNLMCRNQLSVDYLGNIYDCDFNQMMNLPAKTHNGETLTVAK HHHHEEEEEEEECCCCHHHHHHCCCCCCHHHCCCEEECCHHHHHCCCCCCCCCCEEEHHH LIEAGSLDLINEIQTANYCYGCTAGCGSSCGGALV HHCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCC >Mature Secondary Structure TTTPSTTINTKIIPFNSQLNAPLTKQEINVLQINLGKRCNLACTHCHVEASPKRTEELS CCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCHHHHHH AEICEQLIEVIHRFPQIKIVDLTGGAPEMNYGFQPLVAAARQHNKQVIVRSNLTIYFVEG HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCEEEEECC FKYLPEYFAANKIRIVASMPCYLADNVDKMRGVGVFDDSIKALQWLNQVGYGIDPSLVLD HHHHHHHHCCCEEEEEEECCCHHHCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHEEE LVYNPQLPTSEKFSLTPEQSKLEQDYKTFLQKHFRIEFNNLFTITNLPVGRTKLYLERKK EEECCCCCCCCCEECCCCHHHHHHHHHHHHHHHHEEEECCEEEEECCCCCCCEEEEEHHH LETSYLHFLELHFNPHTVGNLMCRNQLSVDYLGNIYDCDFNQMMNLPAKTHNGETLTVAK HHHHEEEEEEEECCCCHHHHHHCCCCCCHHHCCCEEECCHHHHHCCCCCCCCCCEEEHHH LIEAGSLDLINEIQTANYCYGCTAGCGSSCGGALV HHCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA