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The map label for this gene is 75909932

Identifier: 75909932

GI number: 75909932

Start: 4638956

End: 4639324

Strand: Direct

Name: 75909932

Synonym: Ava_3728

Alternate gene names: NA

Gene position: 4638956-4639324 (Clockwise)

Preceding gene: 75909931

Following gene: 75909935

Centisome position: 72.87

GC content: 40.38

Gene sequence:

>369_bases
ATGACATCTATCACCCCCTCAATTCAATTTTTCGCAGGTATTTTTGAAGAACTAAGTAATGTTAGTTTGCGGCGAGAAGT
CCGTACTGGCAAACGCATCGTTATGATGAAGTTTAATCAACTCCAAGCGATAGAAGGATTCAACAGCTTTACTAAACAAT
CCTTGAATTCTCTATTGTTAACCGATGAAGAAGGGGAAATTAGCGTCACCCCTTCTGCTACAAGATTTATTTTTGGGGGT
GATGAAGGTGATGAATTACAAGGAGTAGAGTGCAAATTTGAAGTTGAGCGTGATGATCATTGGGAACGGTTCATGCGCTT
TATGAACCGTTACGCCGAGGCTAATGATATGGAATATGGAGAACGTTAG

Upstream 100 bases:

>100_bases
GGTGCAACTTGTTTGATCGGGACTGACCTTTTAAATCGGATCTATTCGGTTACGAACTGTTGTAAATTGTGGATTATAAC
AATTAAATTTAAATCCACTC

Downstream 100 bases:

>100_bases
GTTGAGATATTTGTGAAAACAGCCTTGGTTTGCAAGTTTCCTGTAGATTCATCTGCTCATGAAGCGCTTTCCTTAAATAG
CATCCATAAACTGCTTTACT

Product: photosystem II protein PsbW, class I

Products: NA

Alternate protein names: Photosystem II; Photosystem II Protein; Photosystem II Complex Subunit; Photosystem II Reaction Center W Protein

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MTSITPSIQFFAGIFEELSNVSLRREVRTGKRIVMMKFNQLQAIEGFNSFTKQSLNSLLLTDEEGEISVTPSATRFIFGG
DEGDELQGVECKFEVERDDHWERFMRFMNRYAEANDMEYGER

Sequences:

>Translated_122_residues
MTSITPSIQFFAGIFEELSNVSLRREVRTGKRIVMMKFNQLQAIEGFNSFTKQSLNSLLLTDEEGEISVTPSATRFIFGG
DEGDELQGVECKFEVERDDHWERFMRFMNRYAEANDMEYGER
>Mature_121_residues
TSITPSIQFFAGIFEELSNVSLRREVRTGKRIVMMKFNQLQAIEGFNSFTKQSLNSLLLTDEEGEISVTPSATRFIFGGD
EGDELQGVECKFEVERDDHWERFMRFMNRYAEANDMEYGER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14180; Mature: 14049

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSITPSIQFFAGIFEELSNVSLRREVRTGKRIVMMKFNQLQAIEGFNSFTKQSLNSLLL
CCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHEEE
TDEEGEISVTPSATRFIFGGDEGDELQGVECKFEVERDDHWERFMRFMNRYAEANDMEYG
ECCCCCEEECCCCEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCC
ER
CC
>Mature Secondary Structure 
TSITPSIQFFAGIFEELSNVSLRREVRTGKRIVMMKFNQLQAIEGFNSFTKQSLNSLLL
CCCCHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHEEE
TDEEGEISVTPSATRFIFGGDEGDELQGVECKFEVERDDHWERFMRFMNRYAEANDMEYG
ECCCCCEEECCCCEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCC
ER
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA