| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909931
Identifier: 75909931
GI number: 75909931
Start: 4638197
End: 4638835
Strand: Direct
Name: 75909931
Synonym: Ava_3727
Alternate gene names: NA
Gene position: 4638197-4638835 (Clockwise)
Preceding gene: 75909930
Following gene: 75909932
Centisome position: 72.86
GC content: 45.7
Gene sequence:
>639_bases ATGACACGTAAATTTGGTGAAATTGCCTTCACTCCAGAAGTACAAGCAGCTCAAGAAGAGCGCGGCTCACGGCAGACCTA TGATCGCTATATTGCCAATGGCCCTGCTAATGACACCATCACCCCCAACATTGCCAAATTTATCGCTCAACTGGAAGGTT TTTACCTGGGAACCGTCAGTTCTAATGGCTACCCCTACATCCAGTTTCGCGGGGGGTCACCTGGTTTCCTCAAGGTGCTG GATGAAAAGACGCTAGGCTTTGCTGATTTTTCGGGTAATTTGCAGTACATTACCGTCGGTAATTTATCCAGTAATGACAA AGCATTTCTGTTTTTGATGGATTATCGTCATCGCCAACGCATCAAGATTTGGGGTAGAGCCGAATACATTGAAGGCGAAT CTAGTTTACTAGAGCAAGTAAGAGTTGCCGATTATCCCGCACAGGTGGAACGGGCGATTCTATTTCATGTCGAAGCCACA AGCGAGAATTGTCCCCAACACATTCCCGTCCGCTATTCCGAAAGAGAAGTTAAAGCAATGATGGCACCTTTAGAAAATCG GATTGCCGAATTGGAACAGCAGTTAAGTGAGCAAAATTCTTCTTCAAAGACTGGAAAGCAACTGCCAAGTAGAGACTGA
Upstream 100 bases:
>100_bases GAGTTAGGGTATTTGGCGATCGCCGATGTGGTAGTCTTACCCTACGTGGCCTTAGCTGGCCATGGCGAAATTGACCTGAC TAGCGGCTTAGGAGGGGATA
Downstream 100 bases:
>100_bases AAAGCATTTTCATCTTTGGTGGTGCAACTTGTTTGATCGGGACTGACCTTTTAAATCGGATCTATTCGGTTACGAACTGT TGTAAATTGTGGATTATAAC
Product: pyridoxamine 5'-phosphate oxidase-like protein
Products: NA
Alternate protein names: Pyridoxamine 5-Phosphate Oxidase; Pyridoxine 5-Phosphate Oxidase; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Pyridoxine 5`-Phosphate Oxidase Protein; Pyridoxine 5`-Phosphate Oxidase; Hydrolase
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MTRKFGEIAFTPEVQAAQEERGSRQTYDRYIANGPANDTITPNIAKFIAQLEGFYLGTVSSNGYPYIQFRGGSPGFLKVL DEKTLGFADFSGNLQYITVGNLSSNDKAFLFLMDYRHRQRIKIWGRAEYIEGESSLLEQVRVADYPAQVERAILFHVEAT SENCPQHIPVRYSEREVKAMMAPLENRIAELEQQLSEQNSSSKTGKQLPSRD
Sequences:
>Translated_212_residues MTRKFGEIAFTPEVQAAQEERGSRQTYDRYIANGPANDTITPNIAKFIAQLEGFYLGTVSSNGYPYIQFRGGSPGFLKVL DEKTLGFADFSGNLQYITVGNLSSNDKAFLFLMDYRHRQRIKIWGRAEYIEGESSLLEQVRVADYPAQVERAILFHVEAT SENCPQHIPVRYSEREVKAMMAPLENRIAELEQQLSEQNSSSKTGKQLPSRD >Mature_211_residues TRKFGEIAFTPEVQAAQEERGSRQTYDRYIANGPANDTITPNIAKFIAQLEGFYLGTVSSNGYPYIQFRGGSPGFLKVLD EKTLGFADFSGNLQYITVGNLSSNDKAFLFLMDYRHRQRIKIWGRAEYIEGESSLLEQVRVADYPAQVERAILFHVEATS ENCPQHIPVRYSEREVKAMMAPLENRIAELEQQLSEQNSSSKTGKQLPSRD
Specific function: Unknown
COG id: COG3576
COG function: function code R; Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24012; Mature: 23881
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRKFGEIAFTPEVQAAQEERGSRQTYDRYIANGPANDTITPNIAKFIAQLEGFYLGTVS CCCCCCCEEECCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEEEC SNGYPYIQFRGGSPGFLKVLDEKTLGFADFSGNLQYITVGNLSSNDKAFLFLMDYRHRQR CCCEEEEEEECCCCCEEEEECCCCCCEEECCCCEEEEEECCCCCCCCEEEEEEECCCCCE IKIWGRAEYIEGESSLLEQVRVADYPAQVERAILFHVEATSENCPQHIPVRYSEREVKAM EEEEECEEEECCHHHHHHHHHHCCCHHHHCEEEEEEEECCCCCCCCCCCCCCCHHHHHHH MAPLENRIAELEQQLSEQNSSSKTGKQLPSRD HHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCC >Mature Secondary Structure TRKFGEIAFTPEVQAAQEERGSRQTYDRYIANGPANDTITPNIAKFIAQLEGFYLGTVS CCCCCCEEECCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEEEC SNGYPYIQFRGGSPGFLKVLDEKTLGFADFSGNLQYITVGNLSSNDKAFLFLMDYRHRQR CCCEEEEEEECCCCCEEEEECCCCCCEEECCCCEEEEEECCCCCCCCEEEEEEECCCCCE IKIWGRAEYIEGESSLLEQVRVADYPAQVERAILFHVEATSENCPQHIPVRYSEREVKAM EEEEECEEEECCHHHHHHHHHHCCCHHHHCEEEEEEEECCCCCCCCCCCCCCCHHHHHHH MAPLENRIAELEQQLSEQNSSSKTGKQLPSRD HHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA