Click here to switch to the map view.

The map label for this gene is 75909891

Identifier: 75909891

GI number: 75909891

Start: 4594048

End: 4595157

Strand: Direct

Name: 75909891

Synonym: Ava_3686

Alternate gene names: NA

Gene position: 4594048-4595157 (Clockwise)

Preceding gene: 75909889

Following gene: 75909892

Centisome position: 72.17

GC content: 43.69

Gene sequence:

>1110_bases
GTGGTGAAAAGTTTCAGTAGTCTGTTTGGCAAATCTCATAGAGGGGTGGGTGTAGAAATTGCACCAGAACGGGTGAATGT
AGTTCAAATACGCAAGCAGCGCCAAGGCTTGAAACTTGAATCTTTAACATCAGTTCCAGTTCCGGAGGGGATTGTCACTG
ATGGTCAAATCACCGATCCTCCAGCGATGGCGCAATTAATTCAGCAGGCGCTGGCTGAAAGCAAAATCAAAAAAGTATCT
CGTGTGGCTACTGGTGTACCCGGACGAGATTCCATTGTCCGCATCATACCCGTACCATCAGAGTTGGATGACAAAGAATT
ACGGGATATGGTGTTAAATCACGAAGCCGGGTTGTATTTACCCTATCCTCGTGAAGAAGCTGATGTAGATTATCAGAAAC
TTGGGTACTTTGTGGATGAGGATGGCATTGAAAAAGTACGGGTGCTGTTAGTTGCTACCCGCAAGGAGGTGACAGATACA
TATATTAGTACTTTTGAGCAGGCAGGCTTACAAATTGGTGTTTTAGAAATTAACAGTTTTGCACTAATTCGGACAATTCG
TGATCAACTGCGGCAATTTGGGCCAGAAGAAGCAACGGTACTAGTTGATATAGAGTTCGACAGTACAGAAATTGCGATCA
TCATTAATGGCGTACCACAATTTTCCCGTACTGTCCCCATTGGCACTTATCAAATGCAAATGGCATTTGCTAGAGCTATG
AGTTTGCCCACTTCCAGAGATATGGAAATGTTACAGGGATTGGTGATTCCTGTAAATTCCGTAGAGAGCGATAAAACGGG
AATGACGGAAACCGACCCCGGTATTGCTGGCGTATTGCGAATCCTGGGAGAACTAACAGATGAGCTACGCCGTTCTATTG
ATTTTTACTTAAATCAGAGTGAAAACGTAGAAATAGCCCAGATTTTATTGGGTGGGCCTGGTGGCGGACTAGAACAACTT
CATGAGTTTTTTACTCAGCGTTTAAGTATTCCTACCAGTCAAATCGATCCTATAGGGTCTTTGTCCTTGCAAGTTGATGA
AGAAAAATATCCCTCTACACAACGTTCTGGCTTAGGAATAGTCCTTGGTTTAGGAATGAGGGAGGTATGA

Upstream 100 bases:

>100_bases
GCATTAGCCCTAAAGCAATATATATACTCAAAAAACTCATAACTAATGACCACTTAAGTCAATTTTAAATTTTCACTTTA
GCAGTTTGGCGGGCATAAAT

Downstream 100 bases:

>100_bases
TACCAATTCAAAATTAGATCGGATTCCTATAGAAAAGTCGGGTTTGATGAGGATTTCCGGTTTTCAGTCTGTGTCCCTGT
TTTGGAGAATTGGTATAAGA

Product: Type IV pilus assembly protein PilM

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilM; Tfp Pilus Assembly Protein ATPase PilM; Type 4 Fimbrial Biogenesis Protein PilM; Type IV Pilus Assembly Protein; Fimbrial Assembly Membrane Protein; Type IV Pilus Assembly Family Protein; Fimbrial Assembly Protein PilM; Type Iv Pilus Assembly Protein Pilm; Tfp Pilus Assembly Protein; Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; Type IV Pili Biogenesis Protein PilM; Type IV Fimbrial Biogenesis Protein PilM; PilM Type IV Pilus Assembly Protein; Tfp Pilus Assembly Protein ATPase; Type IV Pilus Biogenesis Protein TapM; Type 4 Fimbrial Biogenesis Protein; Pili Assembly Protein; Competence Protein PilM; Type IV Pilus Biogenesis ATPase PilM

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MVKSFSSLFGKSHRGVGVEIAPERVNVVQIRKQRQGLKLESLTSVPVPEGIVTDGQITDPPAMAQLIQQALAESKIKKVS
RVATGVPGRDSIVRIIPVPSELDDKELRDMVLNHEAGLYLPYPREEADVDYQKLGYFVDEDGIEKVRVLLVATRKEVTDT
YISTFEQAGLQIGVLEINSFALIRTIRDQLRQFGPEEATVLVDIEFDSTEIAIIINGVPQFSRTVPIGTYQMQMAFARAM
SLPTSRDMEMLQGLVIPVNSVESDKTGMTETDPGIAGVLRILGELTDELRRSIDFYLNQSENVEIAQILLGGPGGGLEQL
HEFFTQRLSIPTSQIDPIGSLSLQVDEEKYPSTQRSGLGIVLGLGMREV

Sequences:

>Translated_369_residues
MVKSFSSLFGKSHRGVGVEIAPERVNVVQIRKQRQGLKLESLTSVPVPEGIVTDGQITDPPAMAQLIQQALAESKIKKVS
RVATGVPGRDSIVRIIPVPSELDDKELRDMVLNHEAGLYLPYPREEADVDYQKLGYFVDEDGIEKVRVLLVATRKEVTDT
YISTFEQAGLQIGVLEINSFALIRTIRDQLRQFGPEEATVLVDIEFDSTEIAIIINGVPQFSRTVPIGTYQMQMAFARAM
SLPTSRDMEMLQGLVIPVNSVESDKTGMTETDPGIAGVLRILGELTDELRRSIDFYLNQSENVEIAQILLGGPGGGLEQL
HEFFTQRLSIPTSQIDPIGSLSLQVDEEKYPSTQRSGLGIVLGLGMREV
>Mature_369_residues
MVKSFSSLFGKSHRGVGVEIAPERVNVVQIRKQRQGLKLESLTSVPVPEGIVTDGQITDPPAMAQLIQQALAESKIKKVS
RVATGVPGRDSIVRIIPVPSELDDKELRDMVLNHEAGLYLPYPREEADVDYQKLGYFVDEDGIEKVRVLLVATRKEVTDT
YISTFEQAGLQIGVLEINSFALIRTIRDQLRQFGPEEATVLVDIEFDSTEIAIIINGVPQFSRTVPIGTYQMQMAFARAM
SLPTSRDMEMLQGLVIPVNSVESDKTGMTETDPGIAGVLRILGELTDELRRSIDFYLNQSENVEIAQILLGGPGGGLEQL
HEFFTQRLSIPTSQIDPIGSLSLQVDEEKYPSTQRSGLGIVLGLGMREV

Specific function: Unknown

COG id: COG4972

COG function: function code NU; Tfp pilus assembly protein, ATPase PilM

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40680; Mature: 40680

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKSFSSLFGKSHRGVGVEIAPERVNVVQIRKQRQGLKLESLTSVPVPEGIVTDGQITDP
CCCCHHHHHCCCCCCCCEEECCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCC
PAMAQLIQQALAESKIKKVSRVATGVPGRDSIVRIIPVPSELDDKELRDMVLNHEAGLYL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEC
PYPREEADVDYQKLGYFVDEDGIEKVRVLLVATRKEVTDTYISTFEQAGLQIGVLEINSF
CCCCCCCCCCHHHHCCEECCCCHHHEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCH
ALIRTIRDQLRQFGPEEATVLVDIEFDSTEIAIIINGVPQFSRTVPIGTYQMQMAFARAM
HHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
SLPTSRDMEMLQGLVIPVNSVESDKTGMTETDPGIAGVLRILGELTDELRRSIDFYLNQS
CCCCCCCHHHHCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
ENVEIAQILLGGPGGGLEQLHEFFTQRLSIPTSQIDPIGSLSLQVDEEKYPSTQRSGLGI
CCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCHHCCCCCCEEEEECHHHCCCCCCCCCEE
VLGLGMREV
EEECCCCCC
>Mature Secondary Structure
MVKSFSSLFGKSHRGVGVEIAPERVNVVQIRKQRQGLKLESLTSVPVPEGIVTDGQITDP
CCCCHHHHHCCCCCCCCEEECCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCC
PAMAQLIQQALAESKIKKVSRVATGVPGRDSIVRIIPVPSELDDKELRDMVLNHEAGLYL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEC
PYPREEADVDYQKLGYFVDEDGIEKVRVLLVATRKEVTDTYISTFEQAGLQIGVLEINSF
CCCCCCCCCCHHHHCCEECCCCHHHEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCH
ALIRTIRDQLRQFGPEEATVLVDIEFDSTEIAIIINGVPQFSRTVPIGTYQMQMAFARAM
HHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
SLPTSRDMEMLQGLVIPVNSVESDKTGMTETDPGIAGVLRILGELTDELRRSIDFYLNQS
CCCCCCCHHHHCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
ENVEIAQILLGGPGGGLEQLHEFFTQRLSIPTSQIDPIGSLSLQVDEEKYPSTQRSGLGI
CCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCHHCCCCCCEEEEECHHHCCCCCCCCCEE
VLGLGMREV
EEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA