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The map label for this gene is rpmF

Identifier: 75909818

GI number: 75909818

Start: 4507758

End: 4507931

Strand: Direct

Name: rpmF

Synonym: Ava_3613

Alternate gene names: 75909818

Gene position: 4507758-4507931 (Clockwise)

Preceding gene: 75909817

Following gene: 75909819

Centisome position: 70.81

GC content: 41.95

Gene sequence:

>174_bases
ATGGCGGTTCCTAAGAAGAAAACATCTAAATCAAAACGAGATAAACGTCGAGCTACCTGGAGACATAAGGCTGCTGTGGA
AGCGCAAAAAGCTCTCTCTTTGGGCAAATCAATTTTGACTGGACGTTCTACATTTGTCTATCCTACTGCGGAAGAAGAAG
ACGAAGAAGAATAA

Upstream 100 bases:

>100_bases
TGACCATTGACTATTGACAAATCCTGAAACTTTTCCATTTGACTTAGCCAAGCGATCGCTTAGAATAGAAAGGTTGTCAA
GAATTGCGATATCGGCTATC

Downstream 100 bases:

>100_bases
AAAAATAGGTAATGAGTAATTGGCAGAACCTATTACCCATTACCTTTCACCCATGACTGATGATCAAATAATGATCTACA
GCGTAAGTTATCTCTAGCTA

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 57; Mature: 56

Protein sequence:

>57_residues
MAVPKKKTSKSKRDKRRATWRHKAAVEAQKALSLGKSILTGRSTFVYPTAEEEDEEE

Sequences:

>Translated_57_residues
MAVPKKKTSKSKRDKRRATWRHKAAVEAQKALSLGKSILTGRSTFVYPTAEEEDEEE
>Mature_56_residues
AVPKKKTSKSKRDKRRATWRHKAAVEAQKALSLGKSILTGRSTFVYPTAEEEDEEE

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_ANAVT (Q3M717)

Other databases:

- EMBL:   CP000117
- RefSeq:   YP_324114.1
- ProteinModelPortal:   Q3M717
- SMR:   Q3M717
- STRING:   Q3M717
- GeneID:   3679305
- GenomeReviews:   CP000117_GR
- KEGG:   ava:Ava_3613
- NMPDR:   fig|240292.3.peg.4590
- eggNOG:   COG0333
- HOGENOM:   HBG621788
- OMA:   TGRSTFV
- ProtClustDB:   PRK01110
- BioCyc:   AVAR240292:AVA_3613-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p

EC number: NA

Molecular weight: Translated: 6476; Mature: 6345

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPKKKTSKSKRDKRRATWRHKAAVEAQKALSLGKSILTGRSTFVYPTAEEEDEEE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCC
>Mature Secondary Structure 
AVPKKKTSKSKRDKRRATWRHKAAVEAQKALSLGKSILTGRSTFVYPTAEEEDEEE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA