| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909795
Identifier: 75909795
GI number: 75909795
Start: 4471598
End: 4472410
Strand: Direct
Name: 75909795
Synonym: Ava_3590
Alternate gene names: NA
Gene position: 4471598-4472410 (Clockwise)
Preceding gene: 75909793
Following gene: 75909796
Centisome position: 70.24
GC content: 42.93
Gene sequence:
>813_bases ATGTACATAAATCCCCATGTTGGTGCTGGGCATTCTCCAAATCTGCAAAGAATTTCCCAAAATACTGTGGCTGAATTGAG CCATGTCCGCCTCATTGCCACAGATATGGATGGTACTCTGACTCAGCAAGGAAGATTTTCTGCGGCTTTGTTGCAAACCC TAGAAGATTTAAAGGCTGGGGGGTTGACGGTATTGATTGTTACCGGACGTTCAGCCGGTTGGATGAGTGGAATTAGTAGC TTAATGCCAGTTGCGGGGGCAATAGGGGAAAATGGGGGTTTGTTCTATCCTGCGGAAAGTGAGCATCCCTTACTATTAAC ACCCATTGCCGATGTAACTGAACATAGACAGAACTTAGCTTTGGTTTTTCAAGAATTAAAACTGAAATTTCCCCAAATTG AAGAATCAGGGGATAATCGCTTTCGCGTTACCGATTGGACATTTGATGTAGCTGGCTTGACTTTAGAGGAACTAAAAATT ATAGCCAATCTCTGTCAAGATATGGGTTGGGGATTTACTTACAGCAACGTCCAGTGTCATATCAAACCACAAGGACAAGA AAAAGCGATCGCCTTATTACAAGTTTTACAAAAATATTTTCCCGATTATTCCCCGACTCAGGTTGTAACTGTTGGTGATA GCCCTAACGATGAAAGTTTATTTAATCAGCGTTATTTCCCCCTTTCTGTCGGTGTGGCGAATGTGTTGAAATATGCAGAC CAGTTGCAGCATCAACCCAGTTACGTCACCACTGCGGCTGAGGGGGAAGGATTTTGTGAGTTATCTAGTTATATTTTGAG GAAGGGCAACTAA
Upstream 100 bases:
>100_bases GTAAACAGAAAAGTTTGACTACCTAGTGTTAGGATGCCCAAATTTATGTTTGTACATTGCTGTATTATTGGTATTTTTTA CAGCTTCTCTCAAACCGCAT
Downstream 100 bases:
>100_bases GGATTACCAATTACCAAATTATGCAAGACTCAGCATTTACCATTTTTATAGCTTTCGGCTGTATTTGGATACTCATAGGC GCAGTTGGTCTAATTGCTGT
Product: HAD family hydrolase
Products: NA
Alternate protein names: HAD-Superfamily Hydrolase Subfamily IIB; Hydrolase; Had-Superfamily Hydrolase Subfamily IIb; HAD-Superfamily Hydrolase; Hydrolase Protein; IIB Family HAD Hydrolase; Haloacid Dehalogenase-Like Hydrolase; SPP-Like Hydrolase; Hydrolase Of Had Superfamily Protein; Archae-Like Hydrolase Family Protein
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MYINPHVGAGHSPNLQRISQNTVAELSHVRLIATDMDGTLTQQGRFSAALLQTLEDLKAGGLTVLIVTGRSAGWMSGISS LMPVAGAIGENGGLFYPAESEHPLLLTPIADVTEHRQNLALVFQELKLKFPQIEESGDNRFRVTDWTFDVAGLTLEELKI IANLCQDMGWGFTYSNVQCHIKPQGQEKAIALLQVLQKYFPDYSPTQVVTVGDSPNDESLFNQRYFPLSVGVANVLKYAD QLQHQPSYVTTAAEGEGFCELSSYILRKGN
Sequences:
>Translated_270_residues MYINPHVGAGHSPNLQRISQNTVAELSHVRLIATDMDGTLTQQGRFSAALLQTLEDLKAGGLTVLIVTGRSAGWMSGISS LMPVAGAIGENGGLFYPAESEHPLLLTPIADVTEHRQNLALVFQELKLKFPQIEESGDNRFRVTDWTFDVAGLTLEELKI IANLCQDMGWGFTYSNVQCHIKPQGQEKAIALLQVLQKYFPDYSPTQVVTVGDSPNDESLFNQRYFPLSVGVANVLKYAD QLQHQPSYVTTAAEGEGFCELSSYILRKGN >Mature_270_residues MYINPHVGAGHSPNLQRISQNTVAELSHVRLIATDMDGTLTQQGRFSAALLQTLEDLKAGGLTVLIVTGRSAGWMSGISS LMPVAGAIGENGGLFYPAESEHPLLLTPIADVTEHRQNLALVFQELKLKFPQIEESGDNRFRVTDWTFDVAGLTLEELKI IANLCQDMGWGFTYSNVQCHIKPQGQEKAIALLQVLQKYFPDYSPTQVVTVGDSPNDESLFNQRYFPLSVGVANVLKYAD QLQHQPSYVTTAAEGEGFCELSSYILRKGN
Specific function: Unknown
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29658; Mature: 29658
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYINPHVGAGHSPNLQRISQNTVAELSHVRLIATDMDGTLTQQGRFSAALLQTLEDLKAG CEECCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCC GLTVLIVTGRSAGWMSGISSLMPVAGAIGENGGLFYPAESEHPLLLTPIADVTEHRQNLA CEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEECHHHHHHHHHHHH LVFQELKLKFPQIEESGDNRFRVTDWTFDVAGLTLEELKIIANLCQDMGWGFTYSNVQCH HHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEECCEEEE IKPQGQEKAIALLQVLQKYFPDYSPTQVVTVGDSPNDESLFNQRYFPLSVGVANVLKYAD ECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHH QLQHQPSYVTTAAEGEGFCELSSYILRKGN HHHCCCCEEEEECCCCCHHHHHHHHHHCCC >Mature Secondary Structure MYINPHVGAGHSPNLQRISQNTVAELSHVRLIATDMDGTLTQQGRFSAALLQTLEDLKAG CEECCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCC GLTVLIVTGRSAGWMSGISSLMPVAGAIGENGGLFYPAESEHPLLLTPIADVTEHRQNLA CEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEECHHHHHHHHHHHH LVFQELKLKFPQIEESGDNRFRVTDWTFDVAGLTLEELKIIANLCQDMGWGFTYSNVQCH HHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEECCEEEE IKPQGQEKAIALLQVLQKYFPDYSPTQVVTVGDSPNDESLFNQRYFPLSVGVANVLKYAD ECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHH QLQHQPSYVTTAAEGEGFCELSSYILRKGN HHHCCCCEEEEECCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA