Definition Anabaena variabilis ATCC 29413 chromosome, complete genome.
Accession NC_007413
Length 6,365,727

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The map label for this gene is 75909749

Identifier: 75909749

GI number: 75909749

Start: 4412486

End: 4413535

Strand: Direct

Name: 75909749

Synonym: Ava_3543

Alternate gene names: NA

Gene position: 4412486-4413535 (Clockwise)

Preceding gene: 75909746

Following gene: 75909755

Centisome position: 69.32

GC content: 33.05

Gene sequence:

>1050_bases
ATGGCTCAAAAATTGCCTATTGATTCAAATATCAACTCTCCTAATCAAGTTTCTATATTTCGTACAGCCAAGCCTAGTTC
TGAGTTCTACACAGTTTTTTCAGAAGCAGAAGTTTTAGGTATAGTTCAAGCCCTAGAATCCAGGTGGGAAATACCTCTGA
AGTATTCATACAAAGGACAAGGTGCAAAAATATGGGATAGTTTTTATCTAAAATATATCGTCCCTACATGGTATCGAACA
TCAAATGTAGAGATTGATTTATTAAAAAGTAATTTTGCATATTTAAATGGTGATTATCAGCAGTGCGAGAAAGTTAATAT
TATAGATGTGGGTGCAGGTAACTCATATCCAGTGAAAGCATTTATTAGTAGACTTCAGAAAATAGATAAAATTGATAAAT
ATATCGCCTTAGATATTAGTGATGAATTACTCAAGGTCTCTAGTAAGAATTTTAAAAAATGGTTTCCCTTAATTGACTAT
ACAAATTATGCAATCGATATAGAAAATAATAAAATTCCAGAAAATATATTCAAAAATCAACTCGAAAATACAGCTAATAT
ATTTTTACATCTAGGTGTCACAATCGCCAACCATCACGACAGACATCAAGTATTCCAAAATTTTCGAGACAGTATGGCAC
AAAATGATTTACTGGTCTTTACAAATGAGATTGGTTCTAATTCTCAATGGGATGGCATAGCTAGAGGTGGTTGTAAATAT
CATGCAGATCAAGTGTATGGATGGCTGACAAACAACCTGGGGATGGAAGCAGAAGATTGTGAACTGGTAAGAAGATATGA
TCCAGCAAAAGACAGTATAGTTGCTAACCTAAAATTACGGCAAAATTACACAATTAATTTTAGTTATTTAGGAATAGATA
AGAGTTTAGAAATATCTGCGGGTGAGGAAATTACTATTTGGCGACATCATAAGTTTGAAATACCCACCCTCATACAAGAA
ATCGAACAAGCTGGGCTAAAACTCGTACATTACAGTACTAATAAATATTCATCACATCTCATGGTAATTTGTGAGACAGC
CAGTAAATAA

Upstream 100 bases:

>100_bases
TACCCATTATACCTATAATTCATAAATCAAATATTAGTCCTATATGAGATAATTTTATTTGTGTAAATTTGCTGTTTATA
AGTAAGCGGAAGATAAAATA

Downstream 100 bases:

>100_bases
CAATTCAAAATTCAAAAACAGGAATAAATAATACCAATTAACCATTTGTAGAGACGCGATGAATCGCGTCTTCTTCACTA
AACCACCGCTTGTTTTGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MAQKLPIDSNINSPNQVSIFRTAKPSSEFYTVFSEAEVLGIVQALESRWEIPLKYSYKGQGAKIWDSFYLKYIVPTWYRT
SNVEIDLLKSNFAYLNGDYQQCEKVNIIDVGAGNSYPVKAFISRLQKIDKIDKYIALDISDELLKVSSKNFKKWFPLIDY
TNYAIDIENNKIPENIFKNQLENTANIFLHLGVTIANHHDRHQVFQNFRDSMAQNDLLVFTNEIGSNSQWDGIARGGCKY
HADQVYGWLTNNLGMEAEDCELVRRYDPAKDSIVANLKLRQNYTINFSYLGIDKSLEISAGEEITIWRHHKFEIPTLIQE
IEQAGLKLVHYSTNKYSSHLMVICETASK

Sequences:

>Translated_349_residues
MAQKLPIDSNINSPNQVSIFRTAKPSSEFYTVFSEAEVLGIVQALESRWEIPLKYSYKGQGAKIWDSFYLKYIVPTWYRT
SNVEIDLLKSNFAYLNGDYQQCEKVNIIDVGAGNSYPVKAFISRLQKIDKIDKYIALDISDELLKVSSKNFKKWFPLIDY
TNYAIDIENNKIPENIFKNQLENTANIFLHLGVTIANHHDRHQVFQNFRDSMAQNDLLVFTNEIGSNSQWDGIARGGCKY
HADQVYGWLTNNLGMEAEDCELVRRYDPAKDSIVANLKLRQNYTINFSYLGIDKSLEISAGEEITIWRHHKFEIPTLIQE
IEQAGLKLVHYSTNKYSSHLMVICETASK
>Mature_348_residues
AQKLPIDSNINSPNQVSIFRTAKPSSEFYTVFSEAEVLGIVQALESRWEIPLKYSYKGQGAKIWDSFYLKYIVPTWYRTS
NVEIDLLKSNFAYLNGDYQQCEKVNIIDVGAGNSYPVKAFISRLQKIDKIDKYIALDISDELLKVSSKNFKKWFPLIDYT
NYAIDIENNKIPENIFKNQLENTANIFLHLGVTIANHHDRHQVFQNFRDSMAQNDLLVFTNEIGSNSQWDGIARGGCKYH
ADQVYGWLTNNLGMEAEDCELVRRYDPAKDSIVANLKLRQNYTINFSYLGIDKSLEISAGEEITIWRHHKFEIPTLIQEI
EQAGLKLVHYSTNKYSSHLMVICETASK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40182; Mature: 40051

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQKLPIDSNINSPNQVSIFRTAKPSSEFYTVFSEAEVLGIVQALESRWEIPLKYSYKGQ
CCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEECCC
GAKIWDSFYLKYIVPTWYRTSNVEIDLLKSNFAYLNGDYQQCEKVNIIDVGAGNSYPVKA
CCCHHHHHHHEEEECCEEECCCCEEEEEECCCEEECCCHHHCCEEEEEEECCCCCCCHHH
FISRLQKIDKIDKYIALDISDELLKVSSKNFKKWFPLIDYTNYAIDIENNKIPENIFKNQ
HHHHHHHHHHHHCEEEEECCHHHHHHCCCCHHHHCCEEECCEEEEEECCCCCCHHHHHHH
LENTANIFLHLGVTIANHHDRHQVFQNFRDSMAQNDLLVFTNEIGSNSQWDGIARGGCKY
HCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEE
HADQVYGWLTNNLGMEAEDCELVRRYDPAKDSIVANLKLRQNYTINFSYLGIDKSLEISA
CHHHHEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEEEECCCCEEECC
GEEITIWRHHKFEIPTLIQEIEQAGLKLVHYSTNKYSSHLMVICETASK
CCEEEEEECCCCCHHHHHHHHHHCCEEEEEEECCCCCCEEEEEEECCCC
>Mature Secondary Structure 
AQKLPIDSNINSPNQVSIFRTAKPSSEFYTVFSEAEVLGIVQALESRWEIPLKYSYKGQ
CCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEECCC
GAKIWDSFYLKYIVPTWYRTSNVEIDLLKSNFAYLNGDYQQCEKVNIIDVGAGNSYPVKA
CCCHHHHHHHEEEECCEEECCCCEEEEEECCCEEECCCHHHCCEEEEEEECCCCCCCHHH
FISRLQKIDKIDKYIALDISDELLKVSSKNFKKWFPLIDYTNYAIDIENNKIPENIFKNQ
HHHHHHHHHHHHCEEEEECCHHHHHHCCCCHHHHCCEEECCEEEEEECCCCCCHHHHHHH
LENTANIFLHLGVTIANHHDRHQVFQNFRDSMAQNDLLVFTNEIGSNSQWDGIARGGCKY
HCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEE
HADQVYGWLTNNLGMEAEDCELVRRYDPAKDSIVANLKLRQNYTINFSYLGIDKSLEISA
CHHHHEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEEEECCCCEEECC
GEEITIWRHHKFEIPTLIQEIEQAGLKLVHYSTNKYSSHLMVICETASK
CCEEEEEECCCCCHHHHHHHHHHCCEEEEEEECCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA