| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909724
Identifier: 75909724
GI number: 75909724
Start: 4369744
End: 4370586
Strand: Direct
Name: 75909724
Synonym: Ava_3518
Alternate gene names: NA
Gene position: 4369744-4370586 (Clockwise)
Preceding gene: 75909722
Following gene: 75909728
Centisome position: 68.64
GC content: 39.5
Gene sequence:
>843_bases ATGAAATTTACTTTAAAAGCGATCGCCTTTTTTACTGGTCTGGCTATGTTCGGGGAAGCGGCAAATGCTGTCCAATTACG TCTACCCCAGCAGCCTCTTAATCATGCCACCAGCATTAGTCAAGCTACAGAACCGTTAGATTTATCTTTGCTGGCGAAAA GTGTTACCAATCTCTTACAAAGCGATCGCCATCAAACTGATTCTCAGATAGAATTTAAAGTCGGTAGTAAAGGTACTGAG ACGACAATTTACTTGCAAAGTAGAATGATTACCCAGTCAGGGAAAAAGTTTCGGGCTGAAGTTGCTTATACAAAGCCAGG AGAAGCTGCCAAAACTGGTAACTTAGTTATTTCTGACGGTAAACAAGTGTGGATTTATCGCTCCGATTTGCGACAATATT CCGTTACTTCCTATCAAGATTTTAAAGACTCTAGCGACTGGGTTTTAATTGGTATCTCCTCTTTTGTTTTTCTAGATTTC CCAGAGGAAGATAGAAAAGTTGTTGTTGATGGTAACTTATCAGACAAAAATGTTTTGACATACCTTGGCTTGGTTAGTAA CGGCGAACTCAAGGGAGAAACACGTAAATTTGATGGTCAAACAGCTTACGTGTATGACTACAAAGACCCAAAAGACGGAT TTACATTAAGCGCCTTCGTCAATCTGGAAACAGCTATTCTCCAGCAAGTACAATTAGCCGGCAAATCAGACGATTTAGAT ATTCTCTTAACCGAAAAAATCTTAAGTAAAACAGTAAATCCTACTATCAATGCCAATACTTTCCGATTTGTACCGCCTAA AGGTACTCAAAGAGTGAAAACCCTCTCTATTAGCCCTTTGTGA
Upstream 100 bases:
>100_bases TTTGGCCAATAGTCAATAGCCAACAGTTAATAGTCAATTTTTTTACTGGAGATAATTATTGCAGCGAGTAAAATCGATTA CAGTCAAATGAGGAATACTC
Downstream 100 bases:
>100_bases GATGACTGGGGATTGGGGATTGGGGACTGGGGACTGGGGATTAGGGACTGGGGACGAAATTTACTCCCTACACCCATATA CCCCTACACCCCTACACCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MKFTLKAIAFFTGLAMFGEAANAVQLRLPQQPLNHATSISQATEPLDLSLLAKSVTNLLQSDRHQTDSQIEFKVGSKGTE TTIYLQSRMITQSGKKFRAEVAYTKPGEAAKTGNLVISDGKQVWIYRSDLRQYSVTSYQDFKDSSDWVLIGISSFVFLDF PEEDRKVVVDGNLSDKNVLTYLGLVSNGELKGETRKFDGQTAYVYDYKDPKDGFTLSAFVNLETAILQQVQLAGKSDDLD ILLTEKILSKTVNPTINANTFRFVPPKGTQRVKTLSISPL
Sequences:
>Translated_280_residues MKFTLKAIAFFTGLAMFGEAANAVQLRLPQQPLNHATSISQATEPLDLSLLAKSVTNLLQSDRHQTDSQIEFKVGSKGTE TTIYLQSRMITQSGKKFRAEVAYTKPGEAAKTGNLVISDGKQVWIYRSDLRQYSVTSYQDFKDSSDWVLIGISSFVFLDF PEEDRKVVVDGNLSDKNVLTYLGLVSNGELKGETRKFDGQTAYVYDYKDPKDGFTLSAFVNLETAILQQVQLAGKSDDLD ILLTEKILSKTVNPTINANTFRFVPPKGTQRVKTLSISPL >Mature_280_residues MKFTLKAIAFFTGLAMFGEAANAVQLRLPQQPLNHATSISQATEPLDLSLLAKSVTNLLQSDRHQTDSQIEFKVGSKGTE TTIYLQSRMITQSGKKFRAEVAYTKPGEAAKTGNLVISDGKQVWIYRSDLRQYSVTSYQDFKDSSDWVLIGISSFVFLDF PEEDRKVVVDGNLSDKNVLTYLGLVSNGELKGETRKFDGQTAYVYDYKDPKDGFTLSAFVNLETAILQQVQLAGKSDDLD ILLTEKILSKTVNPTINANTFRFVPPKGTQRVKTLSISPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31098; Mature: 31098
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFTLKAIAFFTGLAMFGEAANAVQLRLPQQPLNHATSISQATEPLDLSLLAKSVTNLLQ CCEEHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH SDRHQTDSQIEFKVGSKGTETTIYLQSRMITQSGKKFRAEVAYTKPGEAAKTGNLVISDG HCCCCCCCEEEEEECCCCCEEEEEEEEEEHHHCCCEEEEEEEECCCCCCCCCCCEEEECC KQVWIYRSDLRQYSVTSYQDFKDSSDWVLIGISSFVFLDFPEEDRKVVVDGNLSDKNVLT CEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCEEEEECCCCCCCEEE YLGLVSNGELKGETRKFDGQTAYVYDYKDPKDGFTLSAFVNLETAILQQVQLAGKSDDLD EEEEECCCCCCCCCEECCCCEEEEEECCCCCCCEEEEEEECHHHHHHHHHHHCCCCCCEE ILLTEKILSKTVNPTINANTFRFVPPKGTQRVKTLSISPL EEEEHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEEECCC >Mature Secondary Structure MKFTLKAIAFFTGLAMFGEAANAVQLRLPQQPLNHATSISQATEPLDLSLLAKSVTNLLQ CCEEHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH SDRHQTDSQIEFKVGSKGTETTIYLQSRMITQSGKKFRAEVAYTKPGEAAKTGNLVISDG HCCCCCCCEEEEEECCCCCEEEEEEEEEEHHHCCCEEEEEEEECCCCCCCCCCCEEEECC KQVWIYRSDLRQYSVTSYQDFKDSSDWVLIGISSFVFLDFPEEDRKVVVDGNLSDKNVLT CEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCEEEEECCCCCCCEEE YLGLVSNGELKGETRKFDGQTAYVYDYKDPKDGFTLSAFVNLETAILQQVQLAGKSDDLD EEEEECCCCCCCCCEECCCCEEEEEECCCCCCCEEEEEEECHHHHHHHHHHHCCCCCCEE ILLTEKILSKTVNPTINANTFRFVPPKGTQRVKTLSISPL EEEEHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA