Definition Anabaena variabilis ATCC 29413 chromosome, complete genome.
Accession NC_007413
Length 6,365,727

Click here to switch to the map view.

The map label for this gene is 75909715

Identifier: 75909715

GI number: 75909715

Start: 4359379

End: 4359954

Strand: Direct

Name: 75909715

Synonym: Ava_3509

Alternate gene names: NA

Gene position: 4359379-4359954 (Clockwise)

Preceding gene: 75909710

Following gene: 75909719

Centisome position: 68.48

GC content: 43.4

Gene sequence:

>576_bases
GTGGGCTTATTTGATGATTTGAGTCGGTTTCTGGAAAACCGTTTAGAGGAATTCTTGCGGAATAATCCACATTTGGAGTT
GGAGGCGCTGTTAGAACAGCTGCGTCAGCAAGAGGAAGATACTTTAAAGTTGATAGCAGATTTACAGTTACAAGAGAAGC
GATCGCAAGAAGATATTCTCGCCACAGCGCAAGAAATCCAGCGTTGGCATATCCGAGTTCAAAAAGCCAAAAATGCTAAT
AGACAAGATTTGGTGGGGCCAGCAGAAGAGAGAGAAGCAGCTTTATTGCGCGAGGGTAATCAGCTTTGGGGACATATGCA
GGGGCTAAAAGAACGCTTAGAGCAATCCAAAGAATTACTTAGTAAGATACAAGCTAGGCGGCAAGAAGTACAAACCAAAG
CAGCACAAGCACAAACAGCACGGGCTAAAGCCCAAACCCAACAACGTATAGAAACTAATGGTTGGTGGAATTCTACTACC
AGTTCTAGTGGCGGATTTGATGATTTAGAAGAAAAGTTCCGCCGTTGGGAAACCCAAGATGAACTAGAGCAAATGAAGCG
TAATTTGGGAAAATAA

Upstream 100 bases:

>100_bases
TTAGTGCTGGAGAATGGAACAAATTAAAACAGAGGAATTTTCACTACGATGAAAATACTACAATAAAGTAGTAACGCATC
TAACCTCTGGAGTTCTAACA

Downstream 100 bases:

>100_bases
GTAAAAAATGTCTACATAGGAGATAGTCTGGGGAGATATCCCATTATTCAATGGAGAAAGAAAATATTTTCAGGATTTAA
TTCCTTTAAATTGTTCTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MGLFDDLSRFLENRLEEFLRNNPHLELEALLEQLRQQEEDTLKLIADLQLQEKRSQEDILATAQEIQRWHIRVQKAKNAN
RQDLVGPAEEREAALLREGNQLWGHMQGLKERLEQSKELLSKIQARRQEVQTKAAQAQTARAKAQTQQRIETNGWWNSTT
SSSGGFDDLEEKFRRWETQDELEQMKRNLGK

Sequences:

>Translated_191_residues
MGLFDDLSRFLENRLEEFLRNNPHLELEALLEQLRQQEEDTLKLIADLQLQEKRSQEDILATAQEIQRWHIRVQKAKNAN
RQDLVGPAEEREAALLREGNQLWGHMQGLKERLEQSKELLSKIQARRQEVQTKAAQAQTARAKAQTQQRIETNGWWNSTT
SSSGGFDDLEEKFRRWETQDELEQMKRNLGK
>Mature_190_residues
GLFDDLSRFLENRLEEFLRNNPHLELEALLEQLRQQEEDTLKLIADLQLQEKRSQEDILATAQEIQRWHIRVQKAKNANR
QDLVGPAEEREAALLREGNQLWGHMQGLKERLEQSKELLSKIQARRQEVQTKAAQAQTARAKAQTQQRIETNGWWNSTTS
SSGGFDDLEEKFRRWETQDELEQMKRNLGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22447; Mature: 22316

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLFDDLSRFLENRLEEFLRNNPHLELEALLEQLRQQEEDTLKLIADLQLQEKRSQEDIL
CCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATAQEIQRWHIRVQKAKNANRQDLVGPAEEREAALLREGNQLWGHMQGLKERLEQSKELL
HHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKIQARRQEVQTKAAQAQTARAKAQTQQRIETNGWWNSTTSSSGGFDDLEEKFRRWETQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHH
ELEQMKRNLGK
HHHHHHHHHCC
>Mature Secondary Structure 
GLFDDLSRFLENRLEEFLRNNPHLELEALLEQLRQQEEDTLKLIADLQLQEKRSQEDIL
CCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATAQEIQRWHIRVQKAKNANRQDLVGPAEEREAALLREGNQLWGHMQGLKERLEQSKELL
HHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKIQARRQEVQTKAAQAQTARAKAQTQQRIETNGWWNSTTSSSGGFDDLEEKFRRWETQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHH
ELEQMKRNLGK
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA