Definition Anabaena variabilis ATCC 29413 chromosome, complete genome.
Accession NC_007413
Length 6,365,727

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The map label for this gene is 75909682

Identifier: 75909682

GI number: 75909682

Start: 4309660

End: 4310985

Strand: Direct

Name: 75909682

Synonym: Ava_3476

Alternate gene names: NA

Gene position: 4309660-4310985 (Clockwise)

Preceding gene: 75909681

Following gene: 161567474

Centisome position: 67.7

GC content: 42.91

Gene sequence:

>1326_bases
ATGAGCAACAAACCAAAAATAATTGTCTTGGATGATGACCCTACAGGTTCTCAAACAGTCCATAGCTGTTTGCTGTTGAT
GCGTTGGGATGTGGAGACTTTACGCACAGGCTTGCGGGATGATGCACCGATTTTTTTTATCCTCACCAATACTAGAGCCT
TACCGCCAGAATCAGCCGCATCGGTGACAAGAGAAGTTTGTCAAAACTTGAAGGTAGCGCTGGCTGCTGAAGCCGTGAAT
GACTTTCTCATTGTCAGCCGTTCTGATTCTACCTTGCGCGGACATTATCCCATTGAAACCGATGCGATCGCTCAAGAACT
AGGATCATTTGATGCTCATTTTCTTGTCCCTGCTTTTTTTGAAGGGGGACGCATTACCCGTGACAGCATACATTACCTAA
CTATTGATGGTGTACCTACCCCAGTTCACGAAACTGAATTTGCTCGTGATTCTGTATTCGCCTACCATCACAGCTACTTA
CCTAAGTATGTGGAAGAAAAAACTCAAGGCGGTATTAATGCGGAGTCCGTAGAACGATTCTTACTAAGTGACATTCGTAC
TGGAAGCTTAGAACGCTTACTCAAGCTTACAGATAATCAGTGCGCTGTGGTGGATGGAGAAACTCAAGCGGATCTCAACC
GTTTTGCTGTAGATGTATTAGCAGCAGCTAGTCAGGGGAAACGTTTTTTATTCCGCAGTGCTGCCAGTATTTTAACCGCC
TTGGCTGCCTTACCACCCCAACCCATCGCTGCCGAAAATATGGCTGAGTATGTGCGAAAAGGTAAACCAGGAGCCGTAAT
AGTCGGTTCTCATGTCAAAAAGACAACGCAACAGCTAGAAGCGCTGTTACAAGTTGCGGGAACAGTGGGAATTGAAGTCA
ATGTGTCACGATTACTTGATGATCAGGTAGATGCAGCTGATATACTGTTATCTCAAATTAAAACAAGTGTCGAGGAAGTA
CACGAATCTGGTAAAACACCGGTAGTTTATACGAGTCGTCAAGAACTCACATTTAAGGATGTTAAAACCCGGTTGGATTT
TGGCATCAAAGTATCAAGTTTATTAATGGATATTGTCCGCAATTTACCCCCTGACATTGGATTTCTCATCAGTAAGGGGG
GAATTACTTCTAATGATGTATTAAGTACTGGATTAGCTTTAACTTCTGCTCGCTTACTTGGTCAAATTTTACCTGGTTGT
TCGATGGTGCTAACATCGTCTAACCATCCTCAATTTCCCGATTTACCAGTAGTGTTATTTCCAGGGAACGTTGGTGATAC
TAACGCCTTGGGAAAAATTTATCAAAGATTAACTAAAAATACTTAA

Upstream 100 bases:

>100_bases
CAAGTCAACAGTCATTCATTACTGATGTATTTGCTACAAGACCCTTATCACCTTGCTTTTAACTTAGCACTCTTAACTCC
GCATCCACCCACTCTTCATT

Downstream 100 bases:

>100_bases
GTGAGGATGTTGTTGTAATTAGCAACTAGTTTAATATTGGTAATTACCGGGTCTGTCCCTCGTCTTTTGGCTGGTACTGC
ATGACTTCTGATTCTGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 441; Mature: 440

Protein sequence:

>441_residues
MSNKPKIIVLDDDPTGSQTVHSCLLLMRWDVETLRTGLRDDAPIFFILTNTRALPPESAASVTREVCQNLKVALAAEAVN
DFLIVSRSDSTLRGHYPIETDAIAQELGSFDAHFLVPAFFEGGRITRDSIHYLTIDGVPTPVHETEFARDSVFAYHHSYL
PKYVEEKTQGGINAESVERFLLSDIRTGSLERLLKLTDNQCAVVDGETQADLNRFAVDVLAAASQGKRFLFRSAASILTA
LAALPPQPIAAENMAEYVRKGKPGAVIVGSHVKKTTQQLEALLQVAGTVGIEVNVSRLLDDQVDAADILLSQIKTSVEEV
HESGKTPVVYTSRQELTFKDVKTRLDFGIKVSSLLMDIVRNLPPDIGFLISKGGITSNDVLSTGLALTSARLLGQILPGC
SMVLTSSNHPQFPDLPVVLFPGNVGDTNALGKIYQRLTKNT

Sequences:

>Translated_441_residues
MSNKPKIIVLDDDPTGSQTVHSCLLLMRWDVETLRTGLRDDAPIFFILTNTRALPPESAASVTREVCQNLKVALAAEAVN
DFLIVSRSDSTLRGHYPIETDAIAQELGSFDAHFLVPAFFEGGRITRDSIHYLTIDGVPTPVHETEFARDSVFAYHHSYL
PKYVEEKTQGGINAESVERFLLSDIRTGSLERLLKLTDNQCAVVDGETQADLNRFAVDVLAAASQGKRFLFRSAASILTA
LAALPPQPIAAENMAEYVRKGKPGAVIVGSHVKKTTQQLEALLQVAGTVGIEVNVSRLLDDQVDAADILLSQIKTSVEEV
HESGKTPVVYTSRQELTFKDVKTRLDFGIKVSSLLMDIVRNLPPDIGFLISKGGITSNDVLSTGLALTSARLLGQILPGC
SMVLTSSNHPQFPDLPVVLFPGNVGDTNALGKIYQRLTKNT
>Mature_440_residues
SNKPKIIVLDDDPTGSQTVHSCLLLMRWDVETLRTGLRDDAPIFFILTNTRALPPESAASVTREVCQNLKVALAAEAVND
FLIVSRSDSTLRGHYPIETDAIAQELGSFDAHFLVPAFFEGGRITRDSIHYLTIDGVPTPVHETEFARDSVFAYHHSYLP
KYVEEKTQGGINAESVERFLLSDIRTGSLERLLKLTDNQCAVVDGETQADLNRFAVDVLAAASQGKRFLFRSAASILTAL
AALPPQPIAAENMAEYVRKGKPGAVIVGSHVKKTTQQLEALLQVAGTVGIEVNVSRLLDDQVDAADILLSQIKTSVEEVH
ESGKTPVVYTSRQELTFKDVKTRLDFGIKVSSLLMDIVRNLPPDIGFLISKGGITSNDVLSTGLALTSARLLGQILPGCS
MVLTSSNHPQFPDLPVVLFPGNVGDTNALGKIYQRLTKNT

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47977; Mature: 47846

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKPKIIVLDDDPTGSQTVHSCLLLMRWDVETLRTGLRDDAPIFFILTNTRALPPESAA
CCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEEECCCCCCCHHHH
SVTREVCQNLKVALAAEAVNDFLIVSRSDSTLRGHYPIETDAIAQELGSFDAHFLVPAFF
HHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEECCCCCCHHHHHHHHCCCCCHHHHHHHH
EGGRITRDSIHYLTIDGVPTPVHETEFARDSVFAYHHSYLPKYVEEKTQGGINAESVERF
CCCEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LLSDIRTGSLERLLKLTDNQCAVVDGETQADLNRFAVDVLAAASQGKRFLFRSAASILTA
HHHHCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LAALPPQPIAAENMAEYVRKGKPGAVIVGSHVKKTTQQLEALLQVAGTVGIEVNVSRLLD
HHHCCCCCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHC
DQVDAADILLSQIKTSVEEVHESGKTPVVYTSRQELTFKDVKTRLDFGIKVSSLLMDIVR
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHH
NLPPDIGFLISKGGITSNDVLSTGLALTSARLLGQILPGCSMVLTSSNHPQFPDLPVVLF
HCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEE
PGNVGDTNALGKIYQRLTKNT
CCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNKPKIIVLDDDPTGSQTVHSCLLLMRWDVETLRTGLRDDAPIFFILTNTRALPPESAA
CCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEEECCCCCCCHHHH
SVTREVCQNLKVALAAEAVNDFLIVSRSDSTLRGHYPIETDAIAQELGSFDAHFLVPAFF
HHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEECCCCCCHHHHHHHHCCCCCHHHHHHHH
EGGRITRDSIHYLTIDGVPTPVHETEFARDSVFAYHHSYLPKYVEEKTQGGINAESVERF
CCCEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LLSDIRTGSLERLLKLTDNQCAVVDGETQADLNRFAVDVLAAASQGKRFLFRSAASILTA
HHHHCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LAALPPQPIAAENMAEYVRKGKPGAVIVGSHVKKTTQQLEALLQVAGTVGIEVNVSRLLD
HHHCCCCCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHC
DQVDAADILLSQIKTSVEEVHESGKTPVVYTSRQELTFKDVKTRLDFGIKVSSLLMDIVR
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHH
NLPPDIGFLISKGGITSNDVLSTGLALTSARLLGQILPGCSMVLTSSNHPQFPDLPVVLF
HCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEE
PGNVGDTNALGKIYQRLTKNT
CCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA