| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909681
Identifier: 75909681
GI number: 75909681
Start: 4308886
End: 4309551
Strand: Direct
Name: 75909681
Synonym: Ava_3475
Alternate gene names: NA
Gene position: 4308886-4309551 (Clockwise)
Preceding gene: 75909680
Following gene: 75909682
Centisome position: 67.69
GC content: 38.74
Gene sequence:
>666_bases GTGCAACCGGACTTAATGGGTTTAGAAATTAGTAAAGGAGAACTGAGACGCTTAACTGGGGTGTCACCAGATAGAGTTCT TCGTCCTGGTATAATCGCTAACCATCAACAGCGCTTAAAATTTTGGCAGAATGAAATCTCGTTAGTATTTGTAATATCTG TAGTCATTGTTGGCTTAATTTACAGCTTGATTATTTTGCCAACAGTTGGTTCAGCAATTTCGTTAGGTATAATTTTATTC ATTATAGTTGCAGTAGTGCTGTTACTTGGGCGATCGCTCTGGCAACGTCTCCAAACCCCAAAGGTACTTATAAAGTTTTT AGATGCAGTTGACCAATATCACGCCTTAATCGTAGCGGTGGATGTAAACGACCAGTTGGCAGTGTCTGGAGATTTAGATA ATAGCCTGGATGATAGAGAACAAGTTATCACCACCCTGCAACTGTTACGAGAAGATTTAGTCCAAGCTTTGAAAACAGCG CGGCTTTTGCGGGATAATAAAAAACTGCTTGCTAATCAACAAGAGCTATTTGTCAATAATGTCACCAATATTCAAGCCAT TAAAGAAAATACTCAGGCTAGCGAATATGGTCAAATTATCAATCAATTATTGCAGATTGATCTTGAGGTACAAGCAGAAT TGAGAAAACTACAATCTCAGTGCTGA
Upstream 100 bases:
>100_bases GCCTACCTCCCATCCCTCCGCGTTTAAAAAAGTTACGAATTGTCACTCCAAACCACATTAAAATAATGGCACAACGCTCA CCCCACAGGAGTATCCAGTT
Downstream 100 bases:
>100_bases GTAATGAGCAAGTCAACAGTCATTCATTACTGATGTATTTGCTACAAGACCCTTATCACCTTGCTTTTAACTTAGCACTC TTAACTCCGCATCCACCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MQPDLMGLEISKGELRRLTGVSPDRVLRPGIIANHQQRLKFWQNEISLVFVISVVIVGLIYSLIILPTVGSAISLGIILF IIVAVVLLLGRSLWQRLQTPKVLIKFLDAVDQYHALIVAVDVNDQLAVSGDLDNSLDDREQVITTLQLLREDLVQALKTA RLLRDNKKLLANQQELFVNNVTNIQAIKENTQASEYGQIINQLLQIDLEVQAELRKLQSQC
Sequences:
>Translated_221_residues MQPDLMGLEISKGELRRLTGVSPDRVLRPGIIANHQQRLKFWQNEISLVFVISVVIVGLIYSLIILPTVGSAISLGIILF IIVAVVLLLGRSLWQRLQTPKVLIKFLDAVDQYHALIVAVDVNDQLAVSGDLDNSLDDREQVITTLQLLREDLVQALKTA RLLRDNKKLLANQQELFVNNVTNIQAIKENTQASEYGQIINQLLQIDLEVQAELRKLQSQC >Mature_221_residues MQPDLMGLEISKGELRRLTGVSPDRVLRPGIIANHQQRLKFWQNEISLVFVISVVIVGLIYSLIILPTVGSAISLGIILF IIVAVVLLLGRSLWQRLQTPKVLIKFLDAVDQYHALIVAVDVNDQLAVSGDLDNSLDDREQVITTLQLLREDLVQALKTA RLLRDNKKLLANQQELFVNNVTNIQAIKENTQASEYGQIINQLLQIDLEVQAELRKLQSQC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24822; Mature: 24822
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPDLMGLEISKGELRRLTGVSPDRVLRPGIIANHQQRLKFWQNEISLVFVISVVIVGLI CCCCCCCCEECHHHHHHHCCCCHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH YSLIILPTVGSAISLGIILFIIVAVVLLLGRSLWQRLQTPKVLIKFLDAVDQYHALIVAV HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEE DVNDQLAVSGDLDNSLDDREQVITTLQLLREDLVQALKTARLLRDNKKLLANQQELFVNN ECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VTNIQAIKENTQASEYGQIINQLLQIDLEVQAELRKLQSQC CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQPDLMGLEISKGELRRLTGVSPDRVLRPGIIANHQQRLKFWQNEISLVFVISVVIVGLI CCCCCCCCEECHHHHHHHCCCCHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH YSLIILPTVGSAISLGIILFIIVAVVLLLGRSLWQRLQTPKVLIKFLDAVDQYHALIVAV HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEE DVNDQLAVSGDLDNSLDDREQVITTLQLLREDLVQALKTARLLRDNKKLLANQQELFVNN ECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VTNIQAIKENTQASEYGQIINQLLQIDLEVQAELRKLQSQC CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA