| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909663
Identifier: 75909663
GI number: 75909663
Start: 4287466
End: 4287879
Strand: Direct
Name: 75909663
Synonym: Ava_3457
Alternate gene names: NA
Gene position: 4287466-4287879 (Clockwise)
Preceding gene: 75909660
Following gene: 75909664
Centisome position: 67.35
GC content: 55.31
Gene sequence:
>414_bases ATGTTCATGACATTGATTTCTGCATTTTTCCTTGGGTTAGTTGCGGGACTGCGAGCGTTGACAGCCCCTGCTGCTTTATT TCTGGCACGCGGCGGCATTATCGGGATCGTTCTGGCTGTACTGGCAGTGGCTGAGTTGATTGGCGATATGCTGCCGCAAA TTCCCTCTCGCACCAGTCCCCCTGCGTTGATTGCTCGGATTCTCAGTGGTGGCATTGTGGGATGGCTAGTCACCGGAGCA AACAGCAGTTTTGCACCTGTTGGAGCACTCTTTGGCGTTGTAGGTGCAGTGGTCGGTGCGTATGGGGGTCGGGCGGTGCG GATAGCCGCTATTGAACGGATTGGTGCAGTTCCTGCTGCCCTTGCTGAGGATGTTGTCGCGATCGCTCTGGCTGCCTTTA TCGTTACCCGTTGA
Upstream 100 bases:
>100_bases AGGAGGAAAATCCCCAGGTAGCGATCTCCATCTCACTCCTTCTAGCAGCAGGACATAGAAGATCGCTATATGCCATCCAA ATCTACCAGAAAGGCTATTT
Downstream 100 bases:
>100_bases TATCACGAAGTTTGTAAGCTCTAAGTTAAATTGAAGAATGAACACAACTGATTAATATCAAGTCCGGCTAATTAGTTATA ATTCCCGAATCTATACAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MFMTLISAFFLGLVAGLRALTAPAALFLARGGIIGIVLAVLAVAELIGDMLPQIPSRTSPPALIARILSGGIVGWLVTGA NSSFAPVGALFGVVGAVVGAYGGRAVRIAAIERIGAVPAALAEDVVAIALAAFIVTR
Sequences:
>Translated_137_residues MFMTLISAFFLGLVAGLRALTAPAALFLARGGIIGIVLAVLAVAELIGDMLPQIPSRTSPPALIARILSGGIVGWLVTGA NSSFAPVGALFGVVGAVVGAYGGRAVRIAAIERIGAVPAALAEDVVAIALAAFIVTR >Mature_137_residues MFMTLISAFFLGLVAGLRALTAPAALFLARGGIIGIVLAVLAVAELIGDMLPQIPSRTSPPALIARILSGGIVGWLVTGA NSSFAPVGALFGVVGAVVGAYGGRAVRIAAIERIGAVPAALAEDVVAIALAAFIVTR
Specific function: Unknown
COG id: COG3918
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13663; Mature: 13663
Theoretical pI: Translated: 11.67; Mature: 11.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMTLISAFFLGLVAGLRALTAPAALFLARGGIIGIVLAVLAVAELIGDMLPQIPSRTSP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC PALIARILSGGIVGWLVTGANSSFAPVGALFGVVGAVVGAYGGRAVRIAAIERIGAVPAA HHHHHHHHHCCHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHH LAEDVVAIALAAFIVTR HHHHHHHHHHHHHHHCC >Mature Secondary Structure MFMTLISAFFLGLVAGLRALTAPAALFLARGGIIGIVLAVLAVAELIGDMLPQIPSRTSP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC PALIARILSGGIVGWLVTGANSSFAPVGALFGVVGAVVGAYGGRAVRIAAIERIGAVPAA HHHHHHHHHCCHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHH LAEDVVAIALAAFIVTR HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA