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The map label for this gene is oxaA [H]

Identifier: 75909641

GI number: 75909641

Start: 4265991

End: 4267133

Strand: Direct

Name: oxaA [H]

Synonym: Ava_3435

Alternate gene names: 75909641

Gene position: 4265991-4267133 (Clockwise)

Preceding gene: 75909640

Following gene: 75909642

Centisome position: 67.01

GC content: 45.14

Gene sequence:

>1143_bases
ATGGATTTTGGTATCGGGTTTCTCTCGAACAACGTCATGTTGCCGATCATAGACTTTTTCTATAGCGTTGTGCCGAGCTA
TGGATTGGCGATCGTTGCCTTAACATTGATAATCCGCTTCGCGCTCTATCCCCTGAGTGCTGGTCAAATTCGCAATATGC
GGAAAATGCGAATTGTGCAACCCCTCATGCAAAAGCGGATGGCAGAAATTAAAGAGCGCTATAAGGATGATCCGCAAAAG
CAGCAAGAAGAAATGATGAACGTCCAAAAGGAGTTTGGCAACCCCTTAGCCGGATGTTTGCCGTTACTGCTGCAAATGCC
AGTCCTGTTGGCTCTGTTTGCCACTTTGCGGGGTTCACCATTTGCTGGAGTTAATTACTCTGTTAACCTGCAAATCTTCC
CCTCTGAGCAAATCGAACGTATCCAACCTCAAGCATTCGCCACTCCCCCCCAAAATATTTACATTGCCGATGGGGAGCAT
ACCAAAGTTACAGCCATCCTCCCTGGTGGTAATAAGTTAGCGGTAGGCGAAAAAACTAAAATTCAATATCAGACCCTAGA
GGGTAAACCATTCCCAGTTCTACTGGCCGAACACCCAGAGAGTAAACTGTCGCCTGAATGGAAAATTACCAAGGGTGAAG
ACCGAATTAAAATCGATGCCGAGGGCAATATAGAAGCCTTACAGCCAGGAGATGTCACCATTCAAGGTACAATTCCCGGA
CTAGCGGCAGATAAAGGATTTTTATTCATTGATGCTTTAGGTAGAGTAGGCGCAATCGACCCAGATAACACCATCCACTG
GGATATCGTGGGAATGATCGTCTTCTTTGGTATCAGCCTGTACTTTAGCCAAATGCTTTCTGGGCAAAATTCTAGCGGTG
GGAATCCTCAACAGGATACGGTCAACAAAATCACTCCCGTGATCTTTTCTGGGATGTTTTTGTTCTTCCCTCTGCCGGCT
GGTGTACTCATGTACATGGTGATTGGTAACGTTTTCCAAACCTTACAAACCTATATCCTCTCCCGCGAACCTTTACCAGA
GGAAATACAAAAAATTGTAGAAACTCAGGAAAAACAAGCGCAGGCTGAACAAAAGACATTACCTTTTGAGCCAAAAAGTT
CCAAGAAAAAGACCACAGGTTAA

Upstream 100 bases:

>100_bases
TTGTGCGGCTATCCGTAGCAGAAGATAGTCCCACAGTCATCCCGATTTAGATAAATTAGATTCAGTTCAGTTTACAGTAC
CTCAGGTTGAATTCAGAATA

Downstream 100 bases:

>100_bases
TAAATGAGCAATAATCCCATGCAGAGAGGTCAGCAGTGGTTACAATCACTGCTGGAACTCACTGGGGTATCAGCTGAGAT
TCACGGTAGTGTAGAAACTG

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MDFGIGFLSNNVMLPIIDFFYSVVPSYGLAIVALTLIIRFALYPLSAGQIRNMRKMRIVQPLMQKRMAEIKERYKDDPQK
QQEEMMNVQKEFGNPLAGCLPLLLQMPVLLALFATLRGSPFAGVNYSVNLQIFPSEQIERIQPQAFATPPQNIYIADGEH
TKVTAILPGGNKLAVGEKTKIQYQTLEGKPFPVLLAEHPESKLSPEWKITKGEDRIKIDAEGNIEALQPGDVTIQGTIPG
LAADKGFLFIDALGRVGAIDPDNTIHWDIVGMIVFFGISLYFSQMLSGQNSSGGNPQQDTVNKITPVIFSGMFLFFPLPA
GVLMYMVIGNVFQTLQTYILSREPLPEEIQKIVETQEKQAQAEQKTLPFEPKSSKKKTTG

Sequences:

>Translated_380_residues
MDFGIGFLSNNVMLPIIDFFYSVVPSYGLAIVALTLIIRFALYPLSAGQIRNMRKMRIVQPLMQKRMAEIKERYKDDPQK
QQEEMMNVQKEFGNPLAGCLPLLLQMPVLLALFATLRGSPFAGVNYSVNLQIFPSEQIERIQPQAFATPPQNIYIADGEH
TKVTAILPGGNKLAVGEKTKIQYQTLEGKPFPVLLAEHPESKLSPEWKITKGEDRIKIDAEGNIEALQPGDVTIQGTIPG
LAADKGFLFIDALGRVGAIDPDNTIHWDIVGMIVFFGISLYFSQMLSGQNSSGGNPQQDTVNKITPVIFSGMFLFFPLPA
GVLMYMVIGNVFQTLQTYILSREPLPEEIQKIVETQEKQAQAEQKTLPFEPKSSKKKTTG
>Mature_380_residues
MDFGIGFLSNNVMLPIIDFFYSVVPSYGLAIVALTLIIRFALYPLSAGQIRNMRKMRIVQPLMQKRMAEIKERYKDDPQK
QQEEMMNVQKEFGNPLAGCLPLLLQMPVLLALFATLRGSPFAGVNYSVNLQIFPSEQIERIQPQAFATPPQNIYIADGEH
TKVTAILPGGNKLAVGEKTKIQYQTLEGKPFPVLLAEHPESKLSPEWKITKGEDRIKIDAEGNIEALQPGDVTIQGTIPG
LAADKGFLFIDALGRVGAIDPDNTIHWDIVGMIVFFGISLYFSQMLSGQNSSGGNPQQDTVNKITPVIFSGMFLFFPLPA
GVLMYMVIGNVFQTLQTYILSREPLPEEIQKIVETQEKQAQAEQKTLPFEPKSSKKKTTG

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=129, Percent_Identity=38.7596899224806, Blast_Score=95, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 42224; Mature: 42224

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFGIGFLSNNVMLPIIDFFYSVVPSYGLAIVALTLIIRFALYPLSAGQIRNMRKMRIVQ
CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
PLMQKRMAEIKERYKDDPQKQQEEMMNVQKEFGNPLAGCLPLLLQMPVLLALFATLRGSP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
FAGVNYSVNLQIFPSEQIERIQPQAFATPPQNIYIADGEHTKVTAILPGGNKLAVGEKTK
CCCCCEEEEEEECCHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEEECCCCEEECCCCCE
IQYQTLEGKPFPVLLAEHPESKLSPEWKITKGEDRIKIDAEGNIEALQPGDVTIQGTIPG
EEEEEECCCCCEEEEECCCCCCCCCCEEEECCCCEEEEECCCCEEEECCCCEEEEECCCC
LAADKGFLFIDALGRVGAIDPDNTIHWDIVGMIVFFGISLYFSQMLSGQNSSGGNPQQDT
CCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
VNKITPVIFSGMFLFFPLPAGVLMYMVIGNVFQTLQTYILSREPLPEEIQKIVETQEKQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QAEQKTLPFEPKSSKKKTTG
HHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDFGIGFLSNNVMLPIIDFFYSVVPSYGLAIVALTLIIRFALYPLSAGQIRNMRKMRIVQ
CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
PLMQKRMAEIKERYKDDPQKQQEEMMNVQKEFGNPLAGCLPLLLQMPVLLALFATLRGSP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
FAGVNYSVNLQIFPSEQIERIQPQAFATPPQNIYIADGEHTKVTAILPGGNKLAVGEKTK
CCCCCEEEEEEECCHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEEECCCCEEECCCCCE
IQYQTLEGKPFPVLLAEHPESKLSPEWKITKGEDRIKIDAEGNIEALQPGDVTIQGTIPG
EEEEEECCCCCEEEEECCCCCCCCCCEEEECCCCEEEEECCCCEEEECCCCEEEEECCCC
LAADKGFLFIDALGRVGAIDPDNTIHWDIVGMIVFFGISLYFSQMLSGQNSSGGNPQQDT
CCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
VNKITPVIFSGMFLFFPLPAGVLMYMVIGNVFQTLQTYILSREPLPEEIQKIVETQEKQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QAEQKTLPFEPKSSKKKTTG
HHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]