| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909623
Identifier: 75909623
GI number: 75909623
Start: 4247527
End: 4247955
Strand: Direct
Name: 75909623
Synonym: Ava_3417
Alternate gene names: NA
Gene position: 4247527-4247955 (Clockwise)
Preceding gene: 75909622
Following gene: 75909625
Centisome position: 66.72
GC content: 41.49
Gene sequence:
>429_bases ATGGCTCGTAGAAAAAGAAGCTCTCAGGCGTTACAAAAAGCAGTGCGGCGTGCGGCTAGTGTTAACTCTATTGATCCAAA CTTAGATTTAGGTAATGGACTCAGTTTACCAGCTTTCTTAAATCTTATTGAGACTATGCGAAATAAGGAAAATACATACA ATAGCGCCCTTTCCAATCTTGATAAGCTATACAGAGAAATGCTGGAAACAGAACGCCAGTTAGCAGATATGACAGAACAT ATATTGTTAGGTGTGGCTACTCGATACGGCAAAAGCAGCGTAGAGTATGGTATGGCGGGAGGTGTGCCAAAAAACCAGCG CCGCAAAGGGTTACGAGGTGAATCATCAAATTATACTGACGATCGCTCATCATTTGTTGTTAGTGTCAATAACAATGGAA ATGGAACAAAAGCCGCAGGGAAAATTTAG
Upstream 100 bases:
>100_bases CAAAAGCAATTATATATTTGCTGAAATTCTCTCAGGCTGATCTATACAGAAGTTTTTTAAGGTAAATAATATTACTACGC TACCTAACAAGGTGTATTTT
Downstream 100 bases:
>100_bases CTAGAAATTGGGGGGGGGTAGGAAGTGTTAGCACTTATTGATCCCCCCCAACTCCTTTAAAAAAGCTCACCCTTTCACAC AAACAACTTGCTTGAGAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MARRKRSSQALQKAVRRAASVNSIDPNLDLGNGLSLPAFLNLIETMRNKENTYNSALSNLDKLYREMLETERQLADMTEH ILLGVATRYGKSSVEYGMAGGVPKNQRRKGLRGESSNYTDDRSSFVVSVNNNGNGTKAAGKI
Sequences:
>Translated_142_residues MARRKRSSQALQKAVRRAASVNSIDPNLDLGNGLSLPAFLNLIETMRNKENTYNSALSNLDKLYREMLETERQLADMTEH ILLGVATRYGKSSVEYGMAGGVPKNQRRKGLRGESSNYTDDRSSFVVSVNNNGNGTKAAGKI >Mature_141_residues ARRKRSSQALQKAVRRAASVNSIDPNLDLGNGLSLPAFLNLIETMRNKENTYNSALSNLDKLYREMLETERQLADMTEHI LLGVATRYGKSSVEYGMAGGVPKNQRRKGLRGESSNYTDDRSSFVVSVNNNGNGTKAAGKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15638; Mature: 15507
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRKRSSQALQKAVRRAASVNSIDPNLDLGNGLSLPAFLNLIETMRNKENTYNSALSNL CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH DKLYREMLETERQLADMTEHILLGVATRYGKSSVEYGMAGGVPKNQRRKGLRGESSNYTD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHCCCCCCCCCCCC DRSSFVVSVNNNGNGTKAAGKI CCCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure ARRKRSSQALQKAVRRAASVNSIDPNLDLGNGLSLPAFLNLIETMRNKENTYNSALSNL CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH DKLYREMLETERQLADMTEHILLGVATRYGKSSVEYGMAGGVPKNQRRKGLRGESSNYTD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHCCCCCCCCCCCC DRSSFVVSVNNNGNGTKAAGKI CCCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA