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The map label for this gene is 75909622

Identifier: 75909622

GI number: 75909622

Start: 4245236

End: 4246804

Strand: Direct

Name: 75909622

Synonym: Ava_3416

Alternate gene names: NA

Gene position: 4245236-4246804 (Clockwise)

Preceding gene: 75909619

Following gene: 75909623

Centisome position: 66.69

GC content: 42.96

Gene sequence:

>1569_bases
ATGAAGATGCGGGATGAAATAGGAGTGTTATATAAGGATGAGGATTTTGTCAAACTTTACCGCGCAGATTGTGGTCAAAG
TGGAATATCAGCAGGACAACTGGCATTAGTGACAGTAATGCAATTTATCGAAGGTTTAACGGATAGACAAGCGGCGGATG
CAGTGAGGGGTCATATTGATTGGAAATACGCACTATCGTTGGAATTAAATGACCCAGGGTTTGATTATTCAGTACTTTCA
GAATTTCGTCAGCGATTAATCAAAGCAGGACGAGAGCGAGAGTTACTCAACCAAATGCTAGCTCGTTTCCAAGAACTAGG
TTGGCTCAAAAATCGCGGCCGTGTCAGAACTGATTCAACTCACGTATTAGCCGCAGTACGACAGTTAAATCGTTTGGAAT
TAGTGGGAGAAACTTTACGTCATACCTTAAATGACTTGGCTTATTTTGCCCCTGATTGGCTCAAATCGAGAGTTGACGTT
GATTGGTTTGAACGTTACTCCCTGAGATTTGAGCAATACCGCTTGCCCAAATCAAAAGCCGAACGTGAGAAATTGAGGCG
AAAAATTGGTGAGGATGGTCATCATTTGCTATCCGCTTTGTATGCAGACTCAACTTGTAATTGGCTGTGGCAGATTCCAT
CAGTGGAAACATTACGTATAGTTTGGGTGCAACAATACTATATTCAATTGCAACAAGTCTATTGGCGAGAACAAGATAAC
TTACCACCAAATAGACTACAGATTGAATCTCCTTACGATGTTGATGCACGCAATTCCAGCAAGCGAGAAATCAACTGGAC
TGGTTATAATCTGCATCTGACAGAAATTTGTCACCCCATACTGCCAAACTTAATTATCAATGTGGAAACGTCCGTGGCCA
CAAGTGCGGATGTTGAGATGACACCAGTAATTCATTCTCGTTTAAACCAGAACAATCTTTTGCCACAAGAACATGTTGTC
GATACTGGCTATGTCAATGCTCAAAACTTAGTCGATAGTCAATCCCATTTTCATGTTGATTTAGTAGGAAAAGTTCCCCC
CGGAACTAGTTGGCAAGCAACAGCACAATCCGGCTTTGAGCAAAATTGCTTCACTATTCATTGGGATTTGATGCGTGTTG
ATTGCCCAATGGGTAAACAAAGTAAGTCCTGGCGTACAACTGTCGATAGCCATGACAATCCAGTAGTCAAAATACAATTT
GACAAATCCGATTGTTCGCTTTGTTCAAGTCGCTCAAAATGCACTCGCTCCAAAAAACTACCGCGTCTTCTGACCCTCAA
ACCACAGGAACTACATCTTGCATTACATGATGCTCGCATTCGCCAAAAAACTGAATCTTTTCAACAAATTTATCACCAAC
GTGCTGGCGTTGAAGGCTTGATTTCCCAAGCTACTGGTCGCTACCAATTACGCCGTTGTCGCTACATTGGTCTTGCCAAA
ACTCTCTTGCAGCATGTCATTACTGCTGCTGCTATCAACTTCAGTCGGATGTGGGATTGGTGGCAACATGTCCCACGCAG
TCAGACTCGCGTTTCTCACTTTGCTCGAATTGCTCCCACTGCCTCATAG

Upstream 100 bases:

>100_bases
ATCTACAAAGATTATGACCCTGCACCCGCGTGATATGTCGCAGATTCCTGAAACAACAGCGCAAGTAGCCCGGAATTCAT
TTCCCAAAGGGAACATATAT

Downstream 100 bases:

>100_bases
TATTCCTGATTTTCTATTTTGTGATGATTGGTTTTGCCCTCTATCAATTCGCCAACAGTATCCTACAAGGGAAGGGGAGT
AAGAATCAAAGCCTCTCTCC

Product: transposase IS4

Products: NA

Alternate protein names: Transposase; LOW QUALITY PROTEIN Transposase; Transposase Is4 Family

Number of amino acids: Translated: 522; Mature: 522

Protein sequence:

>522_residues
MKMRDEIGVLYKDEDFVKLYRADCGQSGISAGQLALVTVMQFIEGLTDRQAADAVRGHIDWKYALSLELNDPGFDYSVLS
EFRQRLIKAGRERELLNQMLARFQELGWLKNRGRVRTDSTHVLAAVRQLNRLELVGETLRHTLNDLAYFAPDWLKSRVDV
DWFERYSLRFEQYRLPKSKAEREKLRRKIGEDGHHLLSALYADSTCNWLWQIPSVETLRIVWVQQYYIQLQQVYWREQDN
LPPNRLQIESPYDVDARNSSKREINWTGYNLHLTEICHPILPNLIINVETSVATSADVEMTPVIHSRLNQNNLLPQEHVV
DTGYVNAQNLVDSQSHFHVDLVGKVPPGTSWQATAQSGFEQNCFTIHWDLMRVDCPMGKQSKSWRTTVDSHDNPVVKIQF
DKSDCSLCSSRSKCTRSKKLPRLLTLKPQELHLALHDARIRQKTESFQQIYHQRAGVEGLISQATGRYQLRRCRYIGLAK
TLLQHVITAAAINFSRMWDWWQHVPRSQTRVSHFARIAPTAS

Sequences:

>Translated_522_residues
MKMRDEIGVLYKDEDFVKLYRADCGQSGISAGQLALVTVMQFIEGLTDRQAADAVRGHIDWKYALSLELNDPGFDYSVLS
EFRQRLIKAGRERELLNQMLARFQELGWLKNRGRVRTDSTHVLAAVRQLNRLELVGETLRHTLNDLAYFAPDWLKSRVDV
DWFERYSLRFEQYRLPKSKAEREKLRRKIGEDGHHLLSALYADSTCNWLWQIPSVETLRIVWVQQYYIQLQQVYWREQDN
LPPNRLQIESPYDVDARNSSKREINWTGYNLHLTEICHPILPNLIINVETSVATSADVEMTPVIHSRLNQNNLLPQEHVV
DTGYVNAQNLVDSQSHFHVDLVGKVPPGTSWQATAQSGFEQNCFTIHWDLMRVDCPMGKQSKSWRTTVDSHDNPVVKIQF
DKSDCSLCSSRSKCTRSKKLPRLLTLKPQELHLALHDARIRQKTESFQQIYHQRAGVEGLISQATGRYQLRRCRYIGLAK
TLLQHVITAAAINFSRMWDWWQHVPRSQTRVSHFARIAPTAS
>Mature_522_residues
MKMRDEIGVLYKDEDFVKLYRADCGQSGISAGQLALVTVMQFIEGLTDRQAADAVRGHIDWKYALSLELNDPGFDYSVLS
EFRQRLIKAGRERELLNQMLARFQELGWLKNRGRVRTDSTHVLAAVRQLNRLELVGETLRHTLNDLAYFAPDWLKSRVDV
DWFERYSLRFEQYRLPKSKAEREKLRRKIGEDGHHLLSALYADSTCNWLWQIPSVETLRIVWVQQYYIQLQQVYWREQDN
LPPNRLQIESPYDVDARNSSKREINWTGYNLHLTEICHPILPNLIINVETSVATSADVEMTPVIHSRLNQNNLLPQEHVV
DTGYVNAQNLVDSQSHFHVDLVGKVPPGTSWQATAQSGFEQNCFTIHWDLMRVDCPMGKQSKSWRTTVDSHDNPVVKIQF
DKSDCSLCSSRSKCTRSKKLPRLLTLKPQELHLALHDARIRQKTESFQQIYHQRAGVEGLISQATGRYQLRRCRYIGLAK
TLLQHVITAAAINFSRMWDWWQHVPRSQTRVSHFARIAPTAS

Specific function: Unknown

COG id: COG3666

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60563; Mature: 60563

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMRDEIGVLYKDEDFVKLYRADCGQSGISAGQLALVTVMQFIEGLTDRQAADAVRGHID
CCCCCCCCEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
WKYALSLELNDPGFDYSVLSEFRQRLIKAGRERELLNQMLARFQELGWLKNRGRVRTDST
EEEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCH
HVLAAVRQLNRLELVGETLRHTLNDLAYFAPDWLKSRVDVDWFERYSLRFEQYRLPKSKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCCHHHH
EREKLRRKIGEDGHHLLSALYADSTCNWLWQIPSVETLRIVWVQQYYIQLQQVYWREQDN
HHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCC
LPPNRLQIESPYDVDARNSSKREINWTGYNLHLTEICHPILPNLIINVETSVATSADVEM
CCCCCEEECCCCCCCCCCCCCCEEEECEEEEEHHHHHHHHHCCEEEEEECCCCCCCCCEE
TPVIHSRLNQNNLLPQEHVVDTGYVNAQNLVDSQSHFHVDLVGKVPPGTSWQATAQSGFE
CHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCHHHHCCCC
QNCFTIHWDLMRVDCPMGKQSKSWRTTVDSHDNPVVKIQFDKSDCSLCSSRSKCTRSKKL
CCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCC
PRLLTLKPQELHLALHDARIRQKTESFQQIYHQRAGVEGLISQATGRYQLRRCRYIGLAK
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHH
TLLQHVITAAAINFSRMWDWWQHVPRSQTRVSHFARIAPTAS
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKMRDEIGVLYKDEDFVKLYRADCGQSGISAGQLALVTVMQFIEGLTDRQAADAVRGHID
CCCCCCCCEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
WKYALSLELNDPGFDYSVLSEFRQRLIKAGRERELLNQMLARFQELGWLKNRGRVRTDST
EEEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCH
HVLAAVRQLNRLELVGETLRHTLNDLAYFAPDWLKSRVDVDWFERYSLRFEQYRLPKSKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCCHHHH
EREKLRRKIGEDGHHLLSALYADSTCNWLWQIPSVETLRIVWVQQYYIQLQQVYWREQDN
HHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCC
LPPNRLQIESPYDVDARNSSKREINWTGYNLHLTEICHPILPNLIINVETSVATSADVEM
CCCCCEEECCCCCCCCCCCCCCEEEECEEEEEHHHHHHHHHCCEEEEEECCCCCCCCCEE
TPVIHSRLNQNNLLPQEHVVDTGYVNAQNLVDSQSHFHVDLVGKVPPGTSWQATAQSGFE
CHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCHHHHCCCC
QNCFTIHWDLMRVDCPMGKQSKSWRTTVDSHDNPVVKIQFDKSDCSLCSSRSKCTRSKKL
CCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCC
PRLLTLKPQELHLALHDARIRQKTESFQQIYHQRAGVEGLISQATGRYQLRRCRYIGLAK
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHH
TLLQHVITAAAINFSRMWDWWQHVPRSQTRVSHFARIAPTAS
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA