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The map label for this gene is arnC [H]

Identifier: 75909603

GI number: 75909603

Start: 4224915

End: 4225928

Strand: Direct

Name: arnC [H]

Synonym: Ava_3397

Alternate gene names: 75909603

Gene position: 4224915-4225928 (Clockwise)

Preceding gene: 75909602

Following gene: 75909604

Centisome position: 66.37

GC content: 44.97

Gene sequence:

>1014_bases
ATGAGGAATGGAGTAATTTTGGCCAGGGTGAACGAAGGAAATGAAAGTATTTCCGCCATTATTCCTAATGTTTCCGTGGT
GGTTCCAGTGCATGACGAAGTGGAAAGTCTGCCTTTATTATTGGAAGCGATCGGATCTACTTTATCTACTAGTGGGTTAA
GTTATGAAATTATTTGTGTGGATGATGGCTCAACCGATGGTTCAGACGCATTTCTCAAAGAACAAGCGCGCCTCCGTCCC
GACTTAAAAGCAGTGATTTTGCGGCGCAATTACGGTCAAACTGCGGCAATGGCAGCTGGATTTAACTATGCTTTAGGTGA
GGCGATCGTCACCTTAGATGCTGATTTGCAAAACGATCCAGAAGATATCCCGATTTTGTTGGCAAAGTTAGGGGAAGGTT
ATGACTTGGTTAGTGGTTGGCGACATCAACGCCAGGATGCAGCTATCTCCCGGTTACTTCCTTCTAAAATTGCTAACTGG
TTGATTGGCAAAATCACCGGCGTAAAACTGCACGATTATGGCTGTTCTCTGAAAGCTTATCGCTCCGAAGTAGTGGCAGA
TATGAATCTGTATGGGGAACTGCACCGCTTCTTACCAGCTTTGGCTTACATCGAAGGGGCAAGAATTACAGAAATTCCTG
TACGACATCATGCCCGACGCTTTGGCCGCAGTAAATACGGCATTTGGCGGACGTTTCGCGTCCTCATGGATTTGTTAACT
ATCTCTTTCATGAAGAAGTTCCTCACGCGCCCAATGCACGTTTTTGGCCTGTTAGGATTAATCTCCATGATTTTAGGTAC
AGGTATAGGCATCTACTTAACTTTCGTCAAGTTGGCTTTAGGTGAAATGATTGGCAATCGCCCTTTGTTGATTTTGGCGG
TACTATTACTGGTAACGGGGGTACAGTTATTCTGCTTTGGTCTTTTGGCGGAGTTACTGATGCGTACATACCACGAATCC
CAAGGCCGGCCAATTTATCGTGTGAGAGAAGTTGTAGCAAAAAATGGCAACTAA

Upstream 100 bases:

>100_bases
AGGGAGATGTGGTAAGTCGGTCATATTACCAGCAACTACGGGGTGCCGGCAGAGTTGTTAAGAGTTACAAACCACAAAGA
CACTAAGGAAACTGAGGAAT

Downstream 100 bases:

>100_bases
GGTAAAAATATTAATCAAGAAGAAATCAGAATTCTGATTTTTTTGTTAACAAAACATTTAGCATTAAATTGCATCTGCCT
TGAAAGCTTTTAATACATTT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MRNGVILARVNEGNESISAIIPNVSVVVPVHDEVESLPLLLEAIGSTLSTSGLSYEIICVDDGSTDGSDAFLKEQARLRP
DLKAVILRRNYGQTAAMAAGFNYALGEAIVTLDADLQNDPEDIPILLAKLGEGYDLVSGWRHQRQDAAISRLLPSKIANW
LIGKITGVKLHDYGCSLKAYRSEVVADMNLYGELHRFLPALAYIEGARITEIPVRHHARRFGRSKYGIWRTFRVLMDLLT
ISFMKKFLTRPMHVFGLLGLISMILGTGIGIYLTFVKLALGEMIGNRPLLILAVLLLVTGVQLFCFGLLAELLMRTYHES
QGRPIYRVREVVAKNGN

Sequences:

>Translated_337_residues
MRNGVILARVNEGNESISAIIPNVSVVVPVHDEVESLPLLLEAIGSTLSTSGLSYEIICVDDGSTDGSDAFLKEQARLRP
DLKAVILRRNYGQTAAMAAGFNYALGEAIVTLDADLQNDPEDIPILLAKLGEGYDLVSGWRHQRQDAAISRLLPSKIANW
LIGKITGVKLHDYGCSLKAYRSEVVADMNLYGELHRFLPALAYIEGARITEIPVRHHARRFGRSKYGIWRTFRVLMDLLT
ISFMKKFLTRPMHVFGLLGLISMILGTGIGIYLTFVKLALGEMIGNRPLLILAVLLLVTGVQLFCFGLLAELLMRTYHES
QGRPIYRVREVVAKNGN
>Mature_337_residues
MRNGVILARVNEGNESISAIIPNVSVVVPVHDEVESLPLLLEAIGSTLSTSGLSYEIICVDDGSTDGSDAFLKEQARLRP
DLKAVILRRNYGQTAAMAAGFNYALGEAIVTLDADLQNDPEDIPILLAKLGEGYDLVSGWRHQRQDAAISRLLPSKIANW
LIGKITGVKLHDYGCSLKAYRSEVVADMNLYGELHRFLPALAYIEGARITEIPVRHHARRFGRSKYGIWRTFRVLMDLLT
ISFMKKFLTRPMHVFGLLGLISMILGTGIGIYLTFVKLALGEMIGNRPLLILAVLLLVTGVQLFCFGLLAELLMRTYHES
QGRPIYRVREVVAKNGN

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=230, Percent_Identity=30.4347826086957, Blast_Score=90, Evalue=3e-18,
Organism=Escherichia coli, GI1788588, Length=314, Percent_Identity=40.7643312101911, Blast_Score=221, Evalue=4e-59,
Organism=Escherichia coli, GI1788692, Length=312, Percent_Identity=26.6025641025641, Blast_Score=131, Evalue=8e-32,
Organism=Caenorhabditis elegans, GI71999402, Length=219, Percent_Identity=31.0502283105023, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI24585265, Length=215, Percent_Identity=30.6976744186047, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 37289; Mature: 37289

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNGVILARVNEGNESISAIIPNVSVVVPVHDEVESLPLLLEAIGSTLSTSGLSYEIICV
CCCCEEEEEECCCCCCHHEECCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
DDGSTDGSDAFLKEQARLRPDLKAVILRRNYGQTAAMAAGFNYALGEAIVTLDADLQNDP
ECCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHCCCHHHHHHEEEEEECCCCCCC
EDIPILLAKLGEGYDLVSGWRHQRQDAAISRLLPSKIANWLIGKITGVKLHDYGCSLKAY
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHH
RSEVVADMNLYGELHRFLPALAYIEGARITEIPVRHHARRFGRSKYGIWRTFRVLMDLLT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ISFMKKFLTRPMHVFGLLGLISMILGTGIGIYLTFVKLALGEMIGNRPLLILAVLLLVTG
HHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
VQLFCFGLLAELLMRTYHESQGRPIYRVREVVAKNGN
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MRNGVILARVNEGNESISAIIPNVSVVVPVHDEVESLPLLLEAIGSTLSTSGLSYEIICV
CCCCEEEEEECCCCCCHHEECCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
DDGSTDGSDAFLKEQARLRPDLKAVILRRNYGQTAAMAAGFNYALGEAIVTLDADLQNDP
ECCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHCCCHHHHHHEEEEEECCCCCCC
EDIPILLAKLGEGYDLVSGWRHQRQDAAISRLLPSKIANWLIGKITGVKLHDYGCSLKAY
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHH
RSEVVADMNLYGELHRFLPALAYIEGARITEIPVRHHARRFGRSKYGIWRTFRVLMDLLT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ISFMKKFLTRPMHVFGLLGLISMILGTGIGIYLTFVKLALGEMIGNRPLLILAVLLLVTG
HHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
VQLFCFGLLAELLMRTYHESQGRPIYRVREVVAKNGN
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA