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The map label for this gene is yfgC [C]

Identifier: 75909512

GI number: 75909512

Start: 4126377

End: 4127213

Strand: Direct

Name: yfgC [C]

Synonym: Ava_3305

Alternate gene names: 75909512

Gene position: 4126377-4127213 (Clockwise)

Preceding gene: 75909510

Following gene: 75909514

Centisome position: 64.82

GC content: 46.95

Gene sequence:

>837_bases
ATGGCAAATTACCGTGTGTGGCGGCGGCGCTGGTTTTATCCATTAATTTCGGTGGTAGTCGCTGTGAGTCTATGTTTGGG
TACACCTTTGGTTGGAAGGGCTATAGACTTACGACCCCTCTTATTACAAGGTGTGCAAGTACTTCAGCTGTCTAATATAT
CCGATCGCCAGGAAGTTGATCTGGGTAACCAGATGAATCAGCAATTACGTAGTGGTGAAGTGAGCATTTCTCGGAATGCG
GAAATTACTCGCTACGTAGACCAAATTGGACAGCGCTTGGTTGCAACTAGCGATCGCCCCAATCTTCCTTTTACCTTCCA
AGTGGTGGAAAATGATGCTGTTAACGCCTTTGCCACTTTAGGAGGCTTTGTTTATATCCACACAGGTTTACTGAAAACCG
CAGACAATGAAGCGGAATTAGCTAGTGTTATAGCTCATGAAATTGGTCACATTGGCGGTAGACATCTAGTAAAACAAATG
CGACAACGAGCGCTGGCTAGTGGTTTAGCTTCTGCTACAGGTTTAGACCGCAATACAGCTGTAGGACTTGGTGTGGAACT
AGCACTAAACCGTCCCCGCAGTCGTCAAGATGAGTTTGATGCTGACACCAGAGGGTTAAGAACTTTAACAAGAGCGGGTT
ATGCACCATCGGCGATGGTTTCCTTTATGCAGAAACTCTCGAAAGGCGGTGGTTCTGTGCCGGCATTTTTGAGTACTCAC
CCAGCAACAGGCGATCGCATCACTTCTCTCAGACGTGCTATTAATTCCCAAGGCAGTAGTGGGCGTGATGGCTTAGATAA
TGCTGCCTATCGCGCTAGAATCCGGTCAATCCTTTAA

Upstream 100 bases:

>100_bases
AGTTAAAAATGCAACTTACAAAAGGATAGATACGTCCTCTTATTTAGTGTGGTTCCAAAATTATCTTCTAGCCAAATTTA
TGATGAACAGGAAAGGCTTA

Downstream 100 bases:

>100_bases
AAACAGACAACAGACGCGATTAATCGCTAACAACTGTACAGACGCGATTAATCGCGTCTCTAACAAAACACATGATTGAT
TGCGTCTTGTTTATACTTTG

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MANYRVWRRRWFYPLISVVVAVSLCLGTPLVGRAIDLRPLLLQGVQVLQLSNISDRQEVDLGNQMNQQLRSGEVSISRNA
EITRYVDQIGQRLVATSDRPNLPFTFQVVENDAVNAFATLGGFVYIHTGLLKTADNEAELASVIAHEIGHIGGRHLVKQM
RQRALASGLASATGLDRNTAVGLGVELALNRPRSRQDEFDADTRGLRTLTRAGYAPSAMVSFMQKLSKGGGSVPAFLSTH
PATGDRITSLRRAINSQGSSGRDGLDNAAYRARIRSIL

Sequences:

>Translated_278_residues
MANYRVWRRRWFYPLISVVVAVSLCLGTPLVGRAIDLRPLLLQGVQVLQLSNISDRQEVDLGNQMNQQLRSGEVSISRNA
EITRYVDQIGQRLVATSDRPNLPFTFQVVENDAVNAFATLGGFVYIHTGLLKTADNEAELASVIAHEIGHIGGRHLVKQM
RQRALASGLASATGLDRNTAVGLGVELALNRPRSRQDEFDADTRGLRTLTRAGYAPSAMVSFMQKLSKGGGSVPAFLSTH
PATGDRITSLRRAINSQGSSGRDGLDNAAYRARIRSIL
>Mature_277_residues
ANYRVWRRRWFYPLISVVVAVSLCLGTPLVGRAIDLRPLLLQGVQVLQLSNISDRQEVDLGNQMNQQLRSGEVSISRNAE
ITRYVDQIGQRLVATSDRPNLPFTFQVVENDAVNAFATLGGFVYIHTGLLKTADNEAELASVIAHEIGHIGGRHLVKQMR
QRALASGLASATGLDRNTAVGLGVELALNRPRSRQDEFDADTRGLRTLTRAGYAPSAMVSFMQKLSKGGGSVPAFLSTHP
ATGDRITSLRRAINSQGSSGRDGLDNAAYRARIRSIL

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=228, Percent_Identity=34.2105263157895, Blast_Score=120, Evalue=9e-29,
Organism=Escherichia coli, GI87082185, Length=248, Percent_Identity=28.2258064516129, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI87081800, Length=251, Percent_Identity=24.3027888446215, Blast_Score=71, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6322940, Length=149, Percent_Identity=31.5436241610738, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 30322; Mature: 30191

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANYRVWRRRWFYPLISVVVAVSLCLGTPLVGRAIDLRPLLLQGVQVLQLSNISDRQEVD
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHH
LGNQMNQQLRSGEVSISRNAEITRYVDQIGQRLVATSDRPNLPFTFQVVENDAVNAFATL
HHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHH
GGFVYIHTGLLKTADNEAELASVIAHEIGHIGGRHLVKQMRQRALASGLASATGLDRNTA
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VGLGVELALNRPRSRQDEFDADTRGLRTLTRAGYAPSAMVSFMQKLSKGGGSVPAFLSTH
CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHCCC
PATGDRITSLRRAINSQGSSGRDGLDNAAYRARIRSIL
CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
ANYRVWRRRWFYPLISVVVAVSLCLGTPLVGRAIDLRPLLLQGVQVLQLSNISDRQEVD
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHH
LGNQMNQQLRSGEVSISRNAEITRYVDQIGQRLVATSDRPNLPFTFQVVENDAVNAFATL
HHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHH
GGFVYIHTGLLKTADNEAELASVIAHEIGHIGGRHLVKQMRQRALASGLASATGLDRNTA
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VGLGVELALNRPRSRQDEFDADTRGLRTLTRAGYAPSAMVSFMQKLSKGGGSVPAFLSTH
CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHCCC
PATGDRITSLRRAINSQGSSGRDGLDNAAYRARIRSIL
CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]