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The map label for this gene is yloA [H]

Identifier: 75909510

GI number: 75909510

Start: 4123726

End: 4125465

Strand: Direct

Name: yloA [H]

Synonym: Ava_3303

Alternate gene names: 75909510

Gene position: 4123726-4125465 (Clockwise)

Preceding gene: 75909509

Following gene: 75909512

Centisome position: 64.78

GC content: 43.51

Gene sequence:

>1740_bases
ATGCAACCAGTAGACTTTACCACCCTCACAGCTACTTGTAGCGAACTCCGCGCTCACTGGCTACCATCCCGCCTAGAGCA
AGTTTATCAGCGCGATCGCTACACTATTGCTATAGCATTACGTACCCTCGATAAAAGAGGTTGGTTACAAATTTCTTGGC
ATCCTCAAGCAACTCATATTTGTATTGGTGATCCACCTCCACGCACACCAGATACCTTTACCTTCAGCCAACAACTAGTC
CACCAGTTGGGGGGATTAGCCTTAGTTGCAATTGAAGCGATCGCCCCTTGGGAGCGTGTAATTGATTTACAATTTGCCCG
TCGCCCTGGAGATGCTGCACTGTATCACATCTATGGGGAAATCATGGGTAAATACAGTAACGTGATTCTCACCGATGCCA
ACAATCTAATTATTACTGCTGCCCATCAAGTGAGTCAGCAACAATCAAGTGTGCGTCCCATCCTCACCGGACAACCTTAT
GAAACACCGCCAAAACTCACCGGGACTATCCCCAGTTTGCAGGAAACTCAAGCACGTTGGCAAGAAAGAGTCAGTTTAGT
GCCAGGAGCAATTAAACGTCAGTTGCTCAAAAGTTATAGTGGCTTGAGTGCTGTGTTGGTAGAATCCATGTTATTGGTAG
CCAACATTGCACCAGAAACTTCTACTGATTCCCTAACTCCTGAAGACTGGCAACGATTATTTGCACGCTGGCAAGAATGG
CTACACACCTTAAATAGTGGTAAATTTCAACCAGCTTGGATGGCAGATGGATATACAGTTATGGGTTGGGGTGCTGTTGC
ACCAGTCAAAGATATCCAAACATTAATCAACCAATACTATACCAAGCAACTAAATCAACAATTATTTGCCCAATTACGCC
ATCAACTGAATCAGAAATTAAGTAATATTTTAGGCAAATTACGCAATAAAGCCCAAACCTTTAGCGATCGCCTACAGCAA
TCAGATCGTGCTGATGAATATCGCCAAAAAGCTGATTTATTAATGGCGCATCTGCAAAATTGGGAACCGGGGATGAAAGA
AATTAGCATACCTGATTTTGAGACAGGTGAGCCTATGGCGATCGCTCTTTCGCCTGATAAAAATGCTGTGCAGAATGCCC
AAAATCTCTACAAACAACACCAAAAACTCAAACGCGCCCGCATAGCCGTCGAACCGCTACTGCAAGAAGTACAAGCAGAA
ATCGATTATTTAGAACAAGTAGAAGCTGCTATTGCCCAAATAGATAACTATCAAACAGCAGAAGATTTGCAAGCTTTAGA
AGAAATCCGCGACGAATTAATTGGACAGAAATATTTAGAAGAGTTAGAGTATCGTAGCCGCAATAACAACGAAACTGCTA
GCACTAACTTTCACAACTATCGTACCCCTAATGGCTTCACAGTCTTAATCGGGCGCAACAATCGCCAAAATGACCAATTA
ACATTTCGAGTAGCCGGAGATTATGATTTATGGTTCCATGCCCAAGAAATCCCCGGAAGCCATGTACTACTACGTTTAGA
ACCGGGTGCAATACCAGAAGTATCAGACTTACAATATGTAGCTGATTTAACAGCTTACTACAGTCGCGGTCGTCAGAGTG
ACCAAGTACCAGTCGTTTACACCCAACCCAAACACGTTTATAAACCCAAAGGAGCTAAACCAGGAATTGCTATTTACAAA
CAGGAACGCATCCTTTGGGGAAAACCGCAGTTAGTAGATATAGAGAAAGTAGGAAGCTGA

Upstream 100 bases:

>100_bases
TTCAGAATAGCTAACGGCTTTTTTAATTTATATAACTGAGAATTAGGGAAGAGAGAAGTATACTAACCATTGTCTTGTAA
ATGCCAGTGACTAATTTGTT

Downstream 100 bases:

>100_bases
GGGAGCAGGGAGCAGGGAGCAGGGAGCAGGGAGCAGGGATTAGGGGAGAGAACTTACTTCCAGAGTTTTGCCCAGTCCCC
AATCCCCAATCCCCAGTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MQPVDFTTLTATCSELRAHWLPSRLEQVYQRDRYTIAIALRTLDKRGWLQISWHPQATHICIGDPPPRTPDTFTFSQQLV
HQLGGLALVAIEAIAPWERVIDLQFARRPGDAALYHIYGEIMGKYSNVILTDANNLIITAAHQVSQQQSSVRPILTGQPY
ETPPKLTGTIPSLQETQARWQERVSLVPGAIKRQLLKSYSGLSAVLVESMLLVANIAPETSTDSLTPEDWQRLFARWQEW
LHTLNSGKFQPAWMADGYTVMGWGAVAPVKDIQTLINQYYTKQLNQQLFAQLRHQLNQKLSNILGKLRNKAQTFSDRLQQ
SDRADEYRQKADLLMAHLQNWEPGMKEISIPDFETGEPMAIALSPDKNAVQNAQNLYKQHQKLKRARIAVEPLLQEVQAE
IDYLEQVEAAIAQIDNYQTAEDLQALEEIRDELIGQKYLEELEYRSRNNNETASTNFHNYRTPNGFTVLIGRNNRQNDQL
TFRVAGDYDLWFHAQEIPGSHVLLRLEPGAIPEVSDLQYVADLTAYYSRGRQSDQVPVVYTQPKHVYKPKGAKPGIAIYK
QERILWGKPQLVDIEKVGS

Sequences:

>Translated_579_residues
MQPVDFTTLTATCSELRAHWLPSRLEQVYQRDRYTIAIALRTLDKRGWLQISWHPQATHICIGDPPPRTPDTFTFSQQLV
HQLGGLALVAIEAIAPWERVIDLQFARRPGDAALYHIYGEIMGKYSNVILTDANNLIITAAHQVSQQQSSVRPILTGQPY
ETPPKLTGTIPSLQETQARWQERVSLVPGAIKRQLLKSYSGLSAVLVESMLLVANIAPETSTDSLTPEDWQRLFARWQEW
LHTLNSGKFQPAWMADGYTVMGWGAVAPVKDIQTLINQYYTKQLNQQLFAQLRHQLNQKLSNILGKLRNKAQTFSDRLQQ
SDRADEYRQKADLLMAHLQNWEPGMKEISIPDFETGEPMAIALSPDKNAVQNAQNLYKQHQKLKRARIAVEPLLQEVQAE
IDYLEQVEAAIAQIDNYQTAEDLQALEEIRDELIGQKYLEELEYRSRNNNETASTNFHNYRTPNGFTVLIGRNNRQNDQL
TFRVAGDYDLWFHAQEIPGSHVLLRLEPGAIPEVSDLQYVADLTAYYSRGRQSDQVPVVYTQPKHVYKPKGAKPGIAIYK
QERILWGKPQLVDIEKVGS
>Mature_579_residues
MQPVDFTTLTATCSELRAHWLPSRLEQVYQRDRYTIAIALRTLDKRGWLQISWHPQATHICIGDPPPRTPDTFTFSQQLV
HQLGGLALVAIEAIAPWERVIDLQFARRPGDAALYHIYGEIMGKYSNVILTDANNLIITAAHQVSQQQSSVRPILTGQPY
ETPPKLTGTIPSLQETQARWQERVSLVPGAIKRQLLKSYSGLSAVLVESMLLVANIAPETSTDSLTPEDWQRLFARWQEW
LHTLNSGKFQPAWMADGYTVMGWGAVAPVKDIQTLINQYYTKQLNQQLFAQLRHQLNQKLSNILGKLRNKAQTFSDRLQQ
SDRADEYRQKADLLMAHLQNWEPGMKEISIPDFETGEPMAIALSPDKNAVQNAQNLYKQHQKLKRARIAVEPLLQEVQAE
IDYLEQVEAAIAQIDNYQTAEDLQALEEIRDELIGQKYLEELEYRSRNNNETASTNFHNYRTPNGFTVLIGRNNRQNDQL
TFRVAGDYDLWFHAQEIPGSHVLLRLEPGAIPEVSDLQYVADLTAYYSRGRQSDQVPVVYTQPKHVYKPKGAKPGIAIYK
QERILWGKPQLVDIEKVGS

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SDCCAG1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008532
- InterPro:   IPR008616 [H]

Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]

EC number: NA

Molecular weight: Translated: 66013; Mature: 66013

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPVDFTTLTATCSELRAHWLPSRLEQVYQRDRYTIAIALRTLDKRGWLQISWHPQATHI
CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEECCCCCEE
CIGDPPPRTPDTFTFSQQLVHQLGGLALVAIEAIAPWERVIDLQFARRPGDAALYHIYGE
EECCCCCCCCCCCHHHHHHHHHHCCHHEEHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHH
IMGKYSNVILTDANNLIITAAHQVSQQQSSVRPILTGQPYETPPKLTGTIPSLQETQARW
HHHHHCCEEEECCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
QERVSLVPGAIKRQLLKSYSGLSAVLVESMLLVANIAPETSTDSLTPEDWQRLFARWQEW
HHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
LHTLNSGKFQPAWMADGYTVMGWGAVAPVKDIQTLINQYYTKQLNQQLFAQLRHQLNQKL
HHHHHCCCCCCEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNILGKLRNKAQTFSDRLQQSDRADEYRQKADLLMAHLQNWEPGMKEISIPDFETGEPMA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
IALSPDKNAVQNAQNLYKQHQKLKRARIAVEPLLQEVQAEIDYLEQVEAAIAQIDNYQTA
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
EDLQALEEIRDELIGQKYLEELEYRSRNNNETASTNFHNYRTPNGFTVLIGRNNRQNDQL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEE
TFRVAGDYDLWFHAQEIPGSHVLLRLEPGAIPEVSDLQYVADLTAYYSRGRQSDQVPVVY
EEEEECCCEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEE
TQPKHVYKPKGAKPGIAIYKQERILWGKPQLVDIEKVGS
ECCCCCCCCCCCCCCEEEEECCEEEECCCCEECHHCCCC
>Mature Secondary Structure
MQPVDFTTLTATCSELRAHWLPSRLEQVYQRDRYTIAIALRTLDKRGWLQISWHPQATHI
CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEECCCCCEE
CIGDPPPRTPDTFTFSQQLVHQLGGLALVAIEAIAPWERVIDLQFARRPGDAALYHIYGE
EECCCCCCCCCCCHHHHHHHHHHCCHHEEHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHH
IMGKYSNVILTDANNLIITAAHQVSQQQSSVRPILTGQPYETPPKLTGTIPSLQETQARW
HHHHHCCEEEECCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
QERVSLVPGAIKRQLLKSYSGLSAVLVESMLLVANIAPETSTDSLTPEDWQRLFARWQEW
HHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
LHTLNSGKFQPAWMADGYTVMGWGAVAPVKDIQTLINQYYTKQLNQQLFAQLRHQLNQKL
HHHHHCCCCCCEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNILGKLRNKAQTFSDRLQQSDRADEYRQKADLLMAHLQNWEPGMKEISIPDFETGEPMA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
IALSPDKNAVQNAQNLYKQHQKLKRARIAVEPLLQEVQAEIDYLEQVEAAIAQIDNYQTA
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
EDLQALEEIRDELIGQKYLEELEYRSRNNNETASTNFHNYRTPNGFTVLIGRNNRQNDQL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEE
TFRVAGDYDLWFHAQEIPGSHVLLRLEPGAIPEVSDLQYVADLTAYYSRGRQSDQVPVVY
EEEEECCCEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEE
TQPKHVYKPKGAKPGIAIYKQERILWGKPQLVDIEKVGS
ECCCCCCCCCCCCCCEEEEECCEEEECCCCEECHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9534248 [H]