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The map label for this gene is 75909453

Identifier: 75909453

GI number: 75909453

Start: 4034959

End: 4035888

Strand: Direct

Name: 75909453

Synonym: Ava_3246

Alternate gene names: NA

Gene position: 4034959-4035888 (Clockwise)

Preceding gene: 75909450

Following gene: 75909454

Centisome position: 63.39

GC content: 42.58

Gene sequence:

>930_bases
GTGAACGCACTCTTTAGCCAAGGTCATGCCTGTATTGTTGGGGTTGGATGTGATTTACCCAACACCGTAGATGATGCTGT
CGGTCTTGCCAATATCCTCAAAGACCAGGAACGCTGCGCTTATTCATCTGAACAGGTACATTTATTGACTAAAGAACAGG
CAAACCGAGAGGGAATCCTTGCAGCTTTAGACCAATTAGCTCAATCAACTACACCTGATTCTACGGTAATTGTCTATTTT
TCTGGACATGGTTATCAGGTCAGTAGTCCCATAGGTGAAGCGTATTACTTAATGCCTTTTGGCTATGATCAAACCAAACT
ACATAAAACAGCGATTAGTGGTGCAGAATTTATCACCAAGCTACAGGCGATTTCTGCTAAAAAGCTGTTAGTCTTACTGG
ATTGTTGCCATGCTGGTGGCTTAGGAGATACATCAAAGTTAGGGTATGAAGCACAAAAAGCACCCCTTCCGCCAGAGGCT
CAAGCTTTATTTAATCAAGGGAAAGGACGAGTTGCGATCGCTTCCTCCCAAGCTGATGAAAAATCTTTCGCAGGTAAACC
CTACAGTGCTTTTACACTGGCCTTAATTGAAGCTTTAGCAGGTAAAGGAACTTCGCAAAAAGATGGTTATGTGCGGGTTG
CAGATTTAGCCATGTATGCGCGTGAAGTCGTACCAAGAAGAACAGGCGATCGCCAGCATCCCATTTTAAATTTCGAGCAG
GCTGATAACTTTATTCTGGCATACTACGCAGGTGGTGAAACTGAGCCGAAAGGATTACCCTTTGAAGGTGAACCAGAAAT
TGAACCTGAACCTGGAGCTTTTAATCAACCAAGTACCAATAATTCGGTGATTCAAGTTGTGACTCAGAAAAATTCAAAAT
ACAACATCAATACTGGTATGGGTAATACAGTGATTAACGACAGCAATTAA

Upstream 100 bases:

>100_bases
CAATGATAAAAATATAATTTTTAGAATATCAAAATGCCTAATTTTCATACCTGAAGATAGGTGCTAAATTATAGCCATAC
TACCTAATACATACCCAAAA

Downstream 100 bases:

>100_bases
TACAACAGTTATTTTCTATACTCTAACTCAAATTATTTGTTTATAAAAAATAAAAATGATTTTTAGAGATATGTAATTAT
CTCGTGACAATGTAATTAAA

Product: peptidase C14

Products: NA

Alternate protein names: Polysaccharide Deacetylase; Peptidase C; Polysaccharide Deacetylase Family Protein; Helicase; Caspase Domain Protein; WD-40 Repeat-Containing Protein; Wd40 Repeat Subgroup

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MNALFSQGHACIVGVGCDLPNTVDDAVGLANILKDQERCAYSSEQVHLLTKEQANREGILAALDQLAQSTTPDSTVIVYF
SGHGYQVSSPIGEAYYLMPFGYDQTKLHKTAISGAEFITKLQAISAKKLLVLLDCCHAGGLGDTSKLGYEAQKAPLPPEA
QALFNQGKGRVAIASSQADEKSFAGKPYSAFTLALIEALAGKGTSQKDGYVRVADLAMYAREVVPRRTGDRQHPILNFEQ
ADNFILAYYAGGETEPKGLPFEGEPEIEPEPGAFNQPSTNNSVIQVVTQKNSKYNINTGMGNTVINDSN

Sequences:

>Translated_309_residues
MNALFSQGHACIVGVGCDLPNTVDDAVGLANILKDQERCAYSSEQVHLLTKEQANREGILAALDQLAQSTTPDSTVIVYF
SGHGYQVSSPIGEAYYLMPFGYDQTKLHKTAISGAEFITKLQAISAKKLLVLLDCCHAGGLGDTSKLGYEAQKAPLPPEA
QALFNQGKGRVAIASSQADEKSFAGKPYSAFTLALIEALAGKGTSQKDGYVRVADLAMYAREVVPRRTGDRQHPILNFEQ
ADNFILAYYAGGETEPKGLPFEGEPEIEPEPGAFNQPSTNNSVIQVVTQKNSKYNINTGMGNTVINDSN
>Mature_309_residues
MNALFSQGHACIVGVGCDLPNTVDDAVGLANILKDQERCAYSSEQVHLLTKEQANREGILAALDQLAQSTTPDSTVIVYF
SGHGYQVSSPIGEAYYLMPFGYDQTKLHKTAISGAEFITKLQAISAKKLLVLLDCCHAGGLGDTSKLGYEAQKAPLPPEA
QALFNQGKGRVAIASSQADEKSFAGKPYSAFTLALIEALAGKGTSQKDGYVRVADLAMYAREVVPRRTGDRQHPILNFEQ
ADNFILAYYAGGETEPKGLPFEGEPEIEPEPGAFNQPSTNNSVIQVVTQKNSKYNINTGMGNTVINDSN

Specific function: Unknown

COG id: COG4249

COG function: function code R; Uncharacterized protein containing caspase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33169; Mature: 33169

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALFSQGHACIVGVGCDLPNTVDDAVGLANILKDQERCAYSSEQVHLLTKEQANREGIL
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHH
AALDQLAQSTTPDSTVIVYFSGHGYQVSSPIGEAYYLMPFGYDQTKLHKTAISGAEFITK
HHHHHHHHCCCCCCEEEEEECCCCEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH
LQAISAKKLLVLLDCCHAGGLGDTSKLGYEAQKAPLPPEAQALFNQGKGRVAIASSQADE
HHHHHHHHHHHEEEHHCCCCCCCCHHCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCH
KSFAGKPYSAFTLALIEALAGKGTSQKDGYVRVADLAMYAREVVPRRTGDRQHPILNFEQ
HHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCEEECCC
ADNFILAYYAGGETEPKGLPFEGEPEIEPEPGAFNQPSTNNSVIQVVTQKNSKYNINTGM
CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCC
GNTVINDSN
CCCEEECCC
>Mature Secondary Structure
MNALFSQGHACIVGVGCDLPNTVDDAVGLANILKDQERCAYSSEQVHLLTKEQANREGIL
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHH
AALDQLAQSTTPDSTVIVYFSGHGYQVSSPIGEAYYLMPFGYDQTKLHKTAISGAEFITK
HHHHHHHHCCCCCCEEEEEECCCCEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH
LQAISAKKLLVLLDCCHAGGLGDTSKLGYEAQKAPLPPEAQALFNQGKGRVAIASSQADE
HHHHHHHHHHHEEEHHCCCCCCCCHHCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCH
KSFAGKPYSAFTLALIEALAGKGTSQKDGYVRVADLAMYAREVVPRRTGDRQHPILNFEQ
HHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCEEECCC
ADNFILAYYAGGETEPKGLPFEGEPEIEPEPGAFNQPSTNNSVIQVVTQKNSKYNINTGM
CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCC
GNTVINDSN
CCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA