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The map label for this gene is higB-1 [H]

Identifier: 75909449

GI number: 75909449

Start: 4031436

End: 4031720

Strand: Direct

Name: higB-1 [H]

Synonym: Ava_3242

Alternate gene names: 75909449

Gene position: 4031436-4031720 (Clockwise)

Preceding gene: 75909447

Following gene: 75909450

Centisome position: 63.33

GC content: 39.3

Gene sequence:

>285_bases
GTGATTGTTAATTTCAAGTCTGAAGAGACAAAGCTAATTTTTGAAGGCTTTACATCTTCTCAATACCCACCCAATATTCA
GAAGACTGCTTTACGAAAACTACTTATCCTTGATGCAGCAACATCAATTAATGACTTACGCGTCCCACCAGGAAATCGCC
TAGAAAAGCTAGTTGGCGATAGAAGTGGCCAGTACAGTATTCGGATTAATGACCAATGGCGGATTTGCTTTGTTTGGACA
GATGAAAACAATGCTTCGGAAGTTGAAATAGTCGATTACCACTAA

Upstream 100 bases:

>100_bases
AGCTACCCTGGGCGGTTACGCCATCGCTTGGGCAATGTCAAAATTTACCACTTGAAATGTATACTAACGTTTGACGATAG
TAACGCAAAACGATATCATT

Downstream 100 bases:

>100_bases
GTATAAAAATCATTATGAATAACAACCGTTTGCCAAACATTCATCCAGGTGAAATCCTAAAACTAGACTTTTTAGAACCG
TTGAATATCACAGCTTATCG

Product: plasmid maintenance system killer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MIVNFKSEETKLIFEGFTSSQYPPNIQKTALRKLLILDAATSINDLRVPPGNRLEKLVGDRSGQYSIRINDQWRICFVWT
DENNASEVEIVDYH

Sequences:

>Translated_94_residues
MIVNFKSEETKLIFEGFTSSQYPPNIQKTALRKLLILDAATSINDLRVPPGNRLEKLVGDRSGQYSIRINDQWRICFVWT
DENNASEVEIVDYH
>Mature_94_residues
MIVNFKSEETKLIFEGFTSSQYPPNIQKTALRKLLILDAATSINDLRVPPGNRLEKLVGDRSGQYSIRINDQWRICFVWT
DENNASEVEIVDYH

Specific function: Inhibits translation by cleavage of mRNA [H]

COG id: COG3549

COG function: function code R; Plasmid maintenance system killer protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007711 [H]

Pfam domain/function: PF05015 Plasmid_killer [H]

EC number: NA

Molecular weight: Translated: 10858; Mature: 10858

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVNFKSEETKLIFEGFTSSQYPPNIQKTALRKLLILDAATSINDLRVPPGNRLEKLVGD
CEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHEEEEECCCCCCEEECCCCCHHHHHHCC
RSGQYSIRINDQWRICFVWTDENNASEVEIVDYH
CCCEEEEEECCCEEEEEEEECCCCCCEEEEEECC
>Mature Secondary Structure
MIVNFKSEETKLIFEGFTSSQYPPNIQKTALRKLLILDAATSINDLRVPPGNRLEKLVGD
CEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHEEEEECCCCCCEEECCCCCHHHHHHCC
RSGQYSIRINDQWRICFVWTDENNASEVEIVDYH
CCCEEEEEECCCEEEEEEEECCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]