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The map label for this gene is 75909442

Identifier: 75909442

GI number: 75909442

Start: 4024118

End: 4025305

Strand: Direct

Name: 75909442

Synonym: Ava_3235

Alternate gene names: NA

Gene position: 4024118-4025305 (Clockwise)

Preceding gene: 75909439

Following gene: 75909443

Centisome position: 63.22

GC content: 37.79

Gene sequence:

>1188_bases
ATGTACACCAAAACACCCAAAGGGAAAGTACCCAAGGGAAATGTCTCTATTATTGATTCCAATGGACGGCTACAACTACG
ATTTCGCTATGGAGGGAAAAGATACTATTTATCTCTTGGTTTACCCGATACAAAAATAAGCCGTAAAGCAGCAGAAGCAA
AAAAGAATCAGATTGAGTTGGATATTGCTTCAGGAAATTTTGATCCAACTCTGGACAAGTACAAGCCTCAATCAGTGCTG
AGTACCGTTGAACCTGACATTACACCCAAAGTTACACCCAAAATAACAGAACTTTGGGAAGGTTATATCAATTACAAATC
ATCAAGCCTCAAGGAAACAACTAAGGGATACCACAATAGCTTCACCAAACTGTTCCAACGTTTAGGTGATATACCATTGC
TGGATGCTCTTAAAGTGAAAGCAGAATTGGAGAGGATAACTACAGTAGGGCAAACCAAGCGGGCATTGATTCAACTTAAT
GCAGCTTGCAACTGGGCTGTAAAACATAAGTTGATTGACTCTAACCCTTATGTGGGAATGGCTAACGAGATGCCAAAGTA
CCGTTATCAATTGGAACCTAAACCCAATGCTTTTTCAGAACAAGAAAGAGAAAAAATTATTAAAGCATTTAAAGATCATC
GGGGAAATTGGAACGGTAGAGGCTATACAGGCATCAGTTATAGTCATTATGCTTCACTTGTAGAATTTTTATTCCTGACA
GGTTGTCGTCCATCAGAAGCAATTGGGCTTCAATGGAAGCACATAGCAGAGGACTGTGGTTATATTCGCTTTGAAGAGTC
AGTGACAACATCGGGAAATGGTATCCCTACAAGAGTACAGGGATCTAAAAACAACAAAAAACGGCAATTCCCTTGTTCAG
AAAGATTAAGAAATTTACTGATATCTATAAAACCTGAAAATCCTTATTTAGATGATTTGGTTTTTCCTAGTCCAAAGGGA
AAAGTAATCAACTACAACAATTTTTGTAATAATGCCTGGAATAGAATTGTTGACCCTATTAAACCAAACACTACACCTTA
TAGTTGTAGAGATACCTTCATCACTATTCAGATTCTTAAAGGCGTTTCCGAATCAGTCATAGGCAAATGGTGTGATACCA
GCGTTGAGATGATTGAAAAGCATTATGCAGATTATCTAAAAATGCTGAATTTACGTCCCATTGATTAA

Upstream 100 bases:

>100_bases
GTACCATATATGAACAAAAAATTGGGTCTGTTTAGGGTAAATTGGGTGTAAATTGGGTGTAGCGAACTGATGTACTATAA
TCAGCTAAAAACAGTGTAAT

Downstream 100 bases:

>100_bases
TCTGTATAACTGGTTTTAATTAACAAACATTAGTAAAACGAAGAAAGTTATGTACACAAAAAAGTTACTCTTACCCATGC
CTTATGGTATTTCTCCTGTA

Product: phage integrase

Products: NA

Alternate protein names: Phage Integrase Family Protein; Phage Integrase; Integrase

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MYTKTPKGKVPKGNVSIIDSNGRLQLRFRYGGKRYYLSLGLPDTKISRKAAEAKKNQIELDIASGNFDPTLDKYKPQSVL
STVEPDITPKVTPKITELWEGYINYKSSSLKETTKGYHNSFTKLFQRLGDIPLLDALKVKAELERITTVGQTKRALIQLN
AACNWAVKHKLIDSNPYVGMANEMPKYRYQLEPKPNAFSEQEREKIIKAFKDHRGNWNGRGYTGISYSHYASLVEFLFLT
GCRPSEAIGLQWKHIAEDCGYIRFEESVTTSGNGIPTRVQGSKNNKKRQFPCSERLRNLLISIKPENPYLDDLVFPSPKG
KVINYNNFCNNAWNRIVDPIKPNTTPYSCRDTFITIQILKGVSESVIGKWCDTSVEMIEKHYADYLKMLNLRPID

Sequences:

>Translated_395_residues
MYTKTPKGKVPKGNVSIIDSNGRLQLRFRYGGKRYYLSLGLPDTKISRKAAEAKKNQIELDIASGNFDPTLDKYKPQSVL
STVEPDITPKVTPKITELWEGYINYKSSSLKETTKGYHNSFTKLFQRLGDIPLLDALKVKAELERITTVGQTKRALIQLN
AACNWAVKHKLIDSNPYVGMANEMPKYRYQLEPKPNAFSEQEREKIIKAFKDHRGNWNGRGYTGISYSHYASLVEFLFLT
GCRPSEAIGLQWKHIAEDCGYIRFEESVTTSGNGIPTRVQGSKNNKKRQFPCSERLRNLLISIKPENPYLDDLVFPSPKG
KVINYNNFCNNAWNRIVDPIKPNTTPYSCRDTFITIQILKGVSESVIGKWCDTSVEMIEKHYADYLKMLNLRPID
>Mature_395_residues
MYTKTPKGKVPKGNVSIIDSNGRLQLRFRYGGKRYYLSLGLPDTKISRKAAEAKKNQIELDIASGNFDPTLDKYKPQSVL
STVEPDITPKVTPKITELWEGYINYKSSSLKETTKGYHNSFTKLFQRLGDIPLLDALKVKAELERITTVGQTKRALIQLN
AACNWAVKHKLIDSNPYVGMANEMPKYRYQLEPKPNAFSEQEREKIIKAFKDHRGNWNGRGYTGISYSHYASLVEFLFLT
GCRPSEAIGLQWKHIAEDCGYIRFEESVTTSGNGIPTRVQGSKNNKKRQFPCSERLRNLLISIKPENPYLDDLVFPSPKG
KVINYNNFCNNAWNRIVDPIKPNTTPYSCRDTFITIQILKGVSESVIGKWCDTSVEMIEKHYADYLKMLNLRPID

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45065; Mature: 45065

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTKTPKGKVPKGNVSIIDSNGRLQLRFRYGGKRYYLSLGLPDTKISRKAAEAKKNQIEL
CCCCCCCCCCCCCCEEEEECCCEEEEEEEECCEEEEEEECCCCHHHHHHHHHHCCCEEEE
DIASGNFDPTLDKYKPQSVLSTVEPDITPKVTPKITELWEGYINYKSSSLKETTKGYHNS
EEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FTKLFQRLGDIPLLDALKVKAELERITTVGQTKRALIQLNAACNWAVKHKLIDSNPYVGM
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHEEECCCCCCCC
ANEMPKYRYQLEPKPNAFSEQEREKIIKAFKDHRGNWNGRGYTGISYSHYASLVEFLFLT
CCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHC
GCRPSEAIGLQWKHIAEDCGYIRFEESVTTSGNGIPTRVQGSKNNKKRQFPCSERLRNLL
CCCCCHHCCCCHHHHHHHCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHE
ISIKPENPYLDDLVFPSPKGKVINYNNFCNNAWNRIVDPIKPNTTPYSCRDTFITIQILK
EEECCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCCCCHHEEEEHHHH
GVSESVIGKWCDTSVEMIEKHYADYLKMLNLRPID
CCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MYTKTPKGKVPKGNVSIIDSNGRLQLRFRYGGKRYYLSLGLPDTKISRKAAEAKKNQIEL
CCCCCCCCCCCCCCEEEEECCCEEEEEEEECCEEEEEEECCCCHHHHHHHHHHCCCEEEE
DIASGNFDPTLDKYKPQSVLSTVEPDITPKVTPKITELWEGYINYKSSSLKETTKGYHNS
EEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FTKLFQRLGDIPLLDALKVKAELERITTVGQTKRALIQLNAACNWAVKHKLIDSNPYVGM
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHEEECCCCCCCC
ANEMPKYRYQLEPKPNAFSEQEREKIIKAFKDHRGNWNGRGYTGISYSHYASLVEFLFLT
CCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHC
GCRPSEAIGLQWKHIAEDCGYIRFEESVTTSGNGIPTRVQGSKNNKKRQFPCSERLRNLL
CCCCCHHCCCCHHHHHHHCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHE
ISIKPENPYLDDLVFPSPKGKVINYNNFCNNAWNRIVDPIKPNTTPYSCRDTFITIQILK
EEECCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCCCCHHEEEEHHHH
GVSESVIGKWCDTSVEMIEKHYADYLKMLNLRPID
CCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA